RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 RASGRP2Q7LDG7 609 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 RGPD8O14715 1765 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-203ENST00000349748 A0A1W2PQ27 194 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 A0A1W2PQ64 194 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 A0A1W2PQD8 194 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 H7C1W4 665 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 TEX33O43247 280 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 POLR3DP05423 398 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-203ENST00000349748 CTCFP49711 727 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-203ENST00000349748 IFFO1Q0D2I5 559 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 PPP1R7Q15435 360 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 MSL1Q68DK7 614 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 MAP4K1Q92918 833 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 ALS2CR12Q96Q35 445 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 YIPF2Q9BWQ6 316 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 RMI1Q9H9A7 625 aa11.93□□□□□ -0.5
CAPN3-203ENST00000349748 FAM107AO95990 144 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 MYL1P05976 194 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 ATP4AP20648 1035 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 ABL2P42684 1182 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 XRCC4Q13426 336 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 MAEAQ7L5Y9 396 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 KIAA0825Q8IV33 1275 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 LINC00301Q8NCQ3 95 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 CERKQ8TCT0 537 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-203ENST00000349748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.92□□□□□ -0.5
CAPN3-203ENST00000349748 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 TARSL2A2RTX5 802 aaKnown RBP11.92□□□□□ -0.5
CAPN3-203ENST00000349748 B4DLN1 442 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 ATP1A1P05023 1023 aaKnown RBP11.92□□□□□ -0.5
CAPN3-203ENST00000349748 C2orf54Q08AI8 447 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 QPCTQ16769 361 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 ATL3Q6DD88 541 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 NAA16Q6N069 864 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-203ENST00000349748 OLFM4Q6UX06 510 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 TRAPPC11Q7Z392 1133 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 PNMA8AQ86V59 439 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-203ENST00000349748 GUCA1BQ9UMX6 200 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 TFR2Q9UP52 801 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 CRB1P82279 1406 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 NWD1Q149M9 1564 aa11.92□□□□□ -0.5
CAPN3-203ENST00000349748 ZNF185O15231 689 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 CLTAP09496 248 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 FERP16591 822 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 TMEM62Q0P6H9 643 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 NMIQ13287 307 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 PPP1R15BQ5SWA1 713 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 PANX2Q96RD6 677 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 NFE2L3Q9Y4A8 694 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 LTBP4Q8N2S1 1624 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 MST1RQ04912 1400 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 MROH7-TTC4A0A0A0MT08 1334 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 PTPDC1A2A3K4 754 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 PDE2AO00408 941 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 CTDNEP1O95476 244 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 BMP6P22004 513 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 ZC3H6P61129 1189 aaKnown RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 FMR1Q06787 632 aaKnown RBP eCLIP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 RRP12Q5JTH9 1297 aaKnown RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 BRAPQ7Z569 592 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 NSUN7Q8NE18 718 aaKnown RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 RBM41Q96IZ5 413 aaKnown RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 ZIM3Q96PE6 472 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 MAF1Q9H063 256 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 NCOA5Q9HCD5 579 aaKnown RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 EPB41P11171 864 aaKnown RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 MARCKSP29966 332 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 GCLCP48506 637 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 BLMHQ13867 455 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 KDM7AQ6ZMT4 941 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 RBM12BQ8IXT5 1001 aaKnown RBP11.91□□□□□ -0.5
CAPN3-203ENST00000349748 CAGE1Q8TC20 777 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 SLF1Q9BQI6 1058 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 GORASP1Q9BQQ3 440 aa11.91□□□□□ -0.5
CAPN3-203ENST00000349748 A6NHS1 94 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 A6NNZ2 444 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 SPTLC2O15270 562 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 NR1D1P20393 614 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 SLC7A5Q01650 507 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 SF3A3Q12874 501 aaKnown RBP eCLIP11.9□□□□□ -0.5
CAPN3-203ENST00000349748 TUBB8Q3ZCM7 444 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 PPP1R42Q7Z4L9 355 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 PPFIBP1Q86W92 1011 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 AGAP11Q8TF27 550 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 TRIM4Q9C037 500 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 MMADHCQ9H3L0 296 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-203ENST00000349748 SAMSN1Q9NSI8 373 aaKnown RBP11.9□□□□□ -0.5
CAPN3-203ENST00000349748 DMGDHQ9UI17 866 aaKnown RBP11.9□□□□□ -0.5
CAPN3-203ENST00000349748 TUBE1Q9UJT0 475 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 TTF2Q9UNY4 1162 aaKnown RBP11.9□□□□□ -0.5
CAPN3-203ENST00000349748 PEAK1Q9H792 1746 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 AKAP12Q02952 1782 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 DPPA5A6NC42 116 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 HSF2BPO75031 334 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 HPDP32754 393 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-203ENST00000349748 LRRC23Q53EV4 343 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-203ENST00000349748 FOXP4Q8IVH2 680 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-203ENST00000349748 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms