RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CCDC24Q8N4L8 307 aa20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 FAM84BQ96KN1 310 aaPredicted RBP20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 PBX1P40424 430 aa20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 CDKAL1Q5VV42 579 aa20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 CCDC34Q96HJ3 373 aa20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 MTA3Q9BTC8 594 aa20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 PUF60Q9UHX1 559 aaKnown RBP20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 TBC1D8O95759 1140 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 TMTC3Q6ZXV5 915 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 IQCA1Q86XH1 822 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 VPS16Q9H269 839 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 ARGLU1Q9NWB6 273 aaPredicted RBP20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 RTL9Q8NET4 1388 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 GYPCP04921 128 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 CCDC175P0C221 793 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 RCAN1P53805 252 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 PARP10Q53GL7 1025 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 RSRC2Q7L4I2 434 aaKnown RBP20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 ACRBPQ8NEB7 543 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 CELF1Q92879 486 aaKnown RBP20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 ZNF804BA4D1E1 1349 aa20.54■□□□□ 0.88
PTP4A3-202ENST00000349124 LRP5O75197 1615 aa20.53■□□□□ 0.88
PTP4A3-202ENST00000349124 CC2D1AQ6P1N0 951 aaPredicted RBP20.53■□□□□ 0.88
PTP4A3-202ENST00000349124 PANX2Q96RD6 677 aa20.53■□□□□ 0.88
PTP4A3-202ENST00000349124 TFCP2L1Q9NZI6 479 aa20.53■□□□□ 0.88
PTP4A3-202ENST00000349124 MINPP1Q9UNW1 487 aa20.53■□□□□ 0.88
PTP4A3-202ENST00000349124 RRAGBQ5VZM2 374 aa20.53■□□□□ 0.88
PTP4A3-202ENST00000349124 ANKRD18AQ8IVF6 992 aa20.53■□□□□ 0.88
PTP4A3-202ENST00000349124 GSDMAQ96QA5 445 aa20.53■□□□□ 0.88
PTP4A3-202ENST00000349124 GOLGA6L9A6NEM1 432 aa20.52■□□□□ 0.88
PTP4A3-202ENST00000349124 NLRP5P59047 1200 aa20.52■□□□□ 0.88
PTP4A3-202ENST00000349124 RASGRP4Q8TDF6 673 aa20.52■□□□□ 0.88
PTP4A3-202ENST00000349124 TIAM2Q8IVF5 1701 aa20.52■□□□□ 0.88
PTP4A3-202ENST00000349124 KCNQ2O43526 872 aa20.52■□□□□ 0.87
PTP4A3-202ENST00000349124 FERMT2Q96AC1 680 aa20.52■□□□□ 0.87
PTP4A3-202ENST00000349124 CNTNAP5Q8WYK1 1306 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 MFAP3LO75121 409 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 ATP2C1P98194 919 aaPredicted RBP20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 KRT31Q15323 416 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 E2F4Q16254 413 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 ZNF569Q5MCW4 686 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 CDC5LQ99459 802 aaKnown RBP20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 GNL3LQ9NVN8 582 aaKnown RBP20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 TAB2Q9NYJ8 693 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 CHD4Q14839 1912 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 MYH2Q9UKX2 1941 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 SLC51AQ86UW1 340 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 MTMR7Q9Y216 660 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 GDAQ9Y2T3 454 aa20.51■□□□□ 0.87
PTP4A3-202ENST00000349124 MECOMQ03112 1051 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 GPR161Q8N6U8 529 aaKnown RBP20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 BCL9LQ86UU0 1499 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 N4BP3O15049 544 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 PRDX5P30044 214 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 GYS2P54840 703 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 ERVK-24P63145 666 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 PPP2R5BQ15173 497 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 CAVIN4Q5BKX8 364 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 MARCH10Q8NA82 808 aaPredicted RBP20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 GPKOWQ92917 476 aaPredicted RBP eCLIP20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 PLIN2Q99541 437 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 BRIP1Q9BX63 1249 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 ANKRD36CQ5JPF3 1778 aa20.5■□□□□ 0.87
PTP4A3-202ENST00000349124 ABCA3Q99758 1704 aa20.49■□□□□ 0.87
PTP4A3-202ENST00000349124 ADAMTS2O95450 1211 aa20.49■□□□□ 0.87
PTP4A3-202ENST00000349124 PDXDC2PQ6P474 469 aa20.49■□□□□ 0.87
PTP4A3-202ENST00000349124 NSUN4Q96CB9 384 aaKnown RBP20.49■□□□□ 0.87
PTP4A3-202ENST00000349124 EEF2KMTQ96G04 330 aa20.49■□□□□ 0.87
PTP4A3-202ENST00000349124 DOCK2Q92608 1830 aa20.49■□□□□ 0.87
PTP4A3-202ENST00000349124 CTCFLQ8NI51 663 aaPredicted RBP20.49■□□□□ 0.87
PTP4A3-202ENST00000349124 BRMS1Q9HCU9 246 aa20.49■□□□□ 0.87
PTP4A3-202ENST00000349124 DCP1AQ9NPI6 582 aaPredicted RBP20.49■□□□□ 0.87
PTP4A3-202ENST00000349124 RBM28Q9NW13 759 aaKnown RBP20.49■□□□□ 0.87
PTP4A3-202ENST00000349124 PP2D1A8MPX8 630 aa20.48■□□□□ 0.87
PTP4A3-202ENST00000349124 IQUBQ8NA54 791 aa20.48■□□□□ 0.87
PTP4A3-202ENST00000349124 FGRP09769 529 aa20.48■□□□□ 0.87
PTP4A3-202ENST00000349124 SCG2P13521 617 aa20.48■□□□□ 0.87
PTP4A3-202ENST00000349124 ST5P78524 1137 aa20.48■□□□□ 0.87
PTP4A3-202ENST00000349124 UBE4AQ14139 1066 aa20.48■□□□□ 0.87
PTP4A3-202ENST00000349124 DDB1Q16531 1140 aa20.48■□□□□ 0.87
PTP4A3-202ENST00000349124 FILIP1LQ4L180 1135 aa20.48■□□□□ 0.87
PTP4A3-202ENST00000349124 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.48■□□□□ 0.872e-6■■■■■ 27.3
PTP4A3-202ENST00000349124 FAM205AQ6ZU69 1335 aa20.48■□□□□ 0.87
PTP4A3-202ENST00000349124 BAZ2AQ9UIF9 1905 aaKnown RBP20.48■□□□□ 0.87
PTP4A3-202ENST00000349124 TRIM49BA6NDI0 452 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 RASGRP2Q7LDG7 609 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 SLC35F6Q8N357 371 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 STAG2Q8N3U4 1231 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 BCORQ6W2J9 1755 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 TPM1P09493 284 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 TXNRD3Q86VQ6 643 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 NELFBQ8WX92 580 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 GOLGA1Q92805 767 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 BSDC1Q9NW68 430 aaPredicted RBP20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 TFR2Q9UP52 801 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 TAF1P21675 1872 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 CICQ96RK0 1608 aaPredicted RBP20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 USP17L8P0C7I0 530 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 TYW1BQ6NUM6 668 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 RABGGTAQ92696 567 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms