RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 PPP1R13BQ96KQ4 1090 aa24.37■■□□□ 1.49
PTPN18-202ENST00000347849 CLIC6Q96NY7 704 aa24.37■■□□□ 1.49
PTPN18-202ENST00000347849 USP17L3A6NCW0 530 aa24.36■■□□□ 1.49
PTPN18-202ENST00000347849 USP17L4A6NCW7 530 aa24.36■■□□□ 1.49
PTPN18-202ENST00000347849 VEGFAP15692 232 aaPredicted RBP24.36■■□□□ 1.49
PTPN18-202ENST00000347849 DOK7Q18PE1 504 aa24.36■■□□□ 1.49
PTPN18-202ENST00000347849 ERCC6LQ2NKX8 1250 aa24.36■■□□□ 1.49
PTPN18-202ENST00000347849 USP17L1Q7RTZ2 530 aa24.36■■□□□ 1.49
PTPN18-202ENST00000347849 RNF26Q9BY78 433 aaPredicted RBP24.36■■□□□ 1.49
PTPN18-202ENST00000347849 F8W031 263 aaPredicted RBP24.36■■□□□ 1.49
PTPN18-202ENST00000347849 LDHCP07864 332 aa24.36■■□□□ 1.49
PTPN18-202ENST00000347849 RHBDL3P58872 404 aa24.36■■□□□ 1.49
PTPN18-202ENST00000347849 FAM205CA6NFA0 338 aa24.35■■□□□ 1.49
PTPN18-202ENST00000347849 SFPQP23246 707 aaKnown RBP eCLIP24.35■■□□□ 1.49
PTPN18-202ENST00000347849 CERS5Q8N5B7 392 aa24.35■■□□□ 1.49
PTPN18-202ENST00000347849 LRRC37AA6NMS7 1700 aa24.35■■□□□ 1.49
PTPN18-202ENST00000347849 NPR1P16066 1061 aa24.35■■□□□ 1.49
PTPN18-202ENST00000347849 TMTC3Q6ZXV5 915 aa24.35■■□□□ 1.49
PTPN18-202ENST00000347849 NOL10Q9BSC4 688 aaKnown RBP24.35■■□□□ 1.49
PTPN18-202ENST00000347849 EARS2Q5JPH6 523 aaKnown RBP24.34■■□□□ 1.49
PTPN18-202ENST00000347849 ISM2Q6H9L7 571 aa24.34■■□□□ 1.49
PTPN18-202ENST00000347849 TEX11Q8IYF3 940 aa24.34■■□□□ 1.49
PTPN18-202ENST00000347849 ZNF446Q9NWS9 450 aa24.34■■□□□ 1.49
PTPN18-202ENST00000347849 FAM53CQ9NYF3 392 aa24.34■■□□□ 1.49
PTPN18-202ENST00000347849 PARP3Q9Y6F1 533 aa24.34■■□□□ 1.49
PTPN18-202ENST00000347849 PFKFB1P16118 471 aa24.34■■□□□ 1.49
PTPN18-202ENST00000347849 SHC4Q6S5L8 630 aa24.34■■□□□ 1.49
PTPN18-202ENST00000347849 CCDC150Q8NCX0 1101 aa24.34■■□□□ 1.49
PTPN18-202ENST00000347849 LRRN4CLQ8ND94 238 aa24.34■■□□□ 1.49
PTPN18-202ENST00000347849 DDAH1O94760 285 aa24.33■■□□□ 1.49
PTPN18-202ENST00000347849 MKNK2Q9HBH9 465 aa24.33■■□□□ 1.49
PTPN18-202ENST00000347849 RGS17Q9UGC6 210 aaPredicted RBP24.33■■□□□ 1.49
PTPN18-202ENST00000347849 BAZ2BQ9UIF8 2168 aaKnown RBP24.33■■□□□ 1.49
PTPN18-202ENST00000347849 NRXN2Q9P2S2 1712 aa24.33■■□□□ 1.48
PTPN18-202ENST00000347849 PRPF3O43395 683 aaKnown RBP24.33■■□□□ 1.48
PTPN18-202ENST00000347849 ZNF202O95125 648 aa24.33■■□□□ 1.48
PTPN18-202ENST00000347849 PPP2R5BQ15173 497 aa24.33■■□□□ 1.48
PTPN18-202ENST00000347849 NOM1Q5C9Z4 860 aaKnown RBP24.33■■□□□ 1.48
PTPN18-202ENST00000347849 BPIFA3Q9BQP9 254 aa24.33■■□□□ 1.48
PTPN18-202ENST00000347849 L2HGDHQ9H9P8 463 aa24.33■■□□□ 1.48
PTPN18-202ENST00000347849 ST7Q9NRC1 585 aa24.33■■□□□ 1.48
PTPN18-202ENST00000347849 FAM205AQ6ZU69 1335 aa24.32■■□□□ 1.48
PTPN18-202ENST00000347849 DLEC1Q9Y238 1755 aa24.32■■□□□ 1.48
PTPN18-202ENST00000347849 ATP2B1P20020 1258 aa24.32■■□□□ 1.48
PTPN18-202ENST00000347849 SAFBQ15424 915 aaKnown RBP eCLIP24.32■■□□□ 1.48
PTPN18-202ENST00000347849 ZNF622Q969S3 477 aaKnown RBP eCLIP24.32■■□□□ 1.48
PTPN18-202ENST00000347849 KCNQ5Q9NR82 932 aa24.32■■□□□ 1.48
PTPN18-202ENST00000347849 FLT1P17948 1338 aa24.32■■□□□ 1.48
PTPN18-202ENST00000347849 CNTNAP5Q8WYK1 1306 aa24.32■■□□□ 1.48
PTPN18-202ENST00000347849 COL11A2P13942 1736 aaPredicted RBP24.32■■□□□ 1.48
PTPN18-202ENST00000347849 CMA1P23946 247 aa24.32■■□□□ 1.48
PTPN18-202ENST00000347849 AKAP17AQ02040 695 aaKnown RBP24.32■■□□□ 1.48
PTPN18-202ENST00000347849 GRIN1Q05586 938 aa24.32■■□□□ 1.48
PTPN18-202ENST00000347849 DPP8Q6V1X1 898 aaPredicted RBP24.32■■□□□ 1.48
PTPN18-202ENST00000347849 ZC3H12CQ9C0D7 883 aaKnown RBP24.32■■□□□ 1.48
PTPN18-202ENST00000347849 FOXP1Q9H334 677 aaPredicted RBP24.32■■□□□ 1.48
PTPN18-202ENST00000347849 RBM28Q9NW13 759 aaKnown RBP24.32■■□□□ 1.48
PTPN18-202ENST00000347849 DAGLAQ9Y4D2 1042 aa24.32■■□□□ 1.48
PTPN18-202ENST00000347849 PCDHB6Q9Y5E3 794 aa24.32■■□□□ 1.48
PTPN18-202ENST00000347849 ROBO3Q96MS0 1386 aa24.31■■□□□ 1.48
PTPN18-202ENST00000347849 PSDA5PKW4 1024 aaPredicted RBP24.31■■□□□ 1.48
PTPN18-202ENST00000347849 ADAMTS3O15072 1205 aa24.31■■□□□ 1.48
PTPN18-202ENST00000347849 LMOD1P29536 600 aaPredicted RBP24.31■■□□□ 1.48
PTPN18-202ENST00000347849 TPM4P67936 248 aa24.31■■□□□ 1.48
PTPN18-202ENST00000347849 SPECC1Q5M775 1068 aa24.31■■□□□ 1.48
PTPN18-202ENST00000347849 RASGRP2Q7LDG7 609 aa24.31■■□□□ 1.48
PTPN18-202ENST00000347849 TMC4Q7Z404 712 aa24.31■■□□□ 1.48
PTPN18-202ENST00000347849 CABP5Q9NP86 173 aa24.31■■□□□ 1.48
PTPN18-202ENST00000347849 GAKO14976 1311 aa24.31■■□□□ 1.48
PTPN18-202ENST00000347849 CALM1P0DP23 149 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 CALM2P0DP24 149 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 CALM3P0DP25 149 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 RASA1P20936 1047 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 PDE6BP35913 854 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 NLRP12P59046 1061 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 HOMER1Q86YM7 354 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 STAG2Q8N3U4 1231 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 CTCFLQ8NI51 663 aaPredicted RBP24.3■■□□□ 1.48
PTPN18-202ENST00000347849 FAM163AQ96GL9 167 aaPredicted RBP24.3■■□□□ 1.48
PTPN18-202ENST00000347849 COA1Q9GZY4 146 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 MTMR7Q9Y216 660 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 PPP6R2O75170 966 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 NCAPHQ15003 741 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 TBC1D22AQ8WUA7 517 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 PHF20Q9BVI0 1012 aa24.3■■□□□ 1.48
PTPN18-202ENST00000347849 ZNF219Q9P2Y4 722 aaPredicted RBP24.3■■□□□ 1.48
PTPN18-202ENST00000347849 NPY5RQ15761 445 aa24.29■■□□□ 1.48
PTPN18-202ENST00000347849 CCDC93Q567U6 631 aa24.29■■□□□ 1.48
PTPN18-202ENST00000347849 MASTLQ96GX5 879 aa24.29■■□□□ 1.48
PTPN18-202ENST00000347849 WNT7AO00755 349 aa24.29■■□□□ 1.48
PTPN18-202ENST00000347849 NRDCO43847 1150 aa24.29■■□□□ 1.48
PTPN18-202ENST00000347849 EZH2Q15910 746 aaKnown RBP24.29■■□□□ 1.48
PTPN18-202ENST00000347849 TAF3Q5VWG9 929 aa24.29■■□□□ 1.48
PTPN18-202ENST00000347849 FLAD1Q8NFF5 587 aa24.29■■□□□ 1.48
PTPN18-202ENST00000347849 TSPY3P0CV98 308 aa24.28■■□□□ 1.48
PTPN18-202ENST00000347849 TSPY8P0CW00 308 aa24.28■■□□□ 1.48
PTPN18-202ENST00000347849 ALDH1B1P30837 517 aa24.28■■□□□ 1.48
PTPN18-202ENST00000347849 POTEAQ6S8J7 498 aa24.28■■□□□ 1.48
PTPN18-202ENST00000347849 PNMA1Q8ND90 353 aa24.28■■□□□ 1.48
PTPN18-202ENST00000347849 KAT14Q9H8E8 782 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms