RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 RAD9BQ6WBX8 426 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 ANKRD18AQ8IVF6 992 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 AK7Q96M32 723 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 PLIN2Q99541 437 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 FAM53CQ9NYF3 392 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 PARP3Q9Y6F1 533 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 TRIM29Q14134 588 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 IFIT1BQ5T764 474 aaKnown RBP6.91□□□□□ -1.3
CLCN3-201ENST00000347613 PIK3AP1Q6ZUJ8 805 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 SH3RF3Q8TEJ3 882 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-201ENST00000347613 CPLX3Q8WVH0 158 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 MAP7D2Q96T17 732 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 UBAC1Q9BSL1 405 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 TMEM60Q9H2L4 133 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 DDX41Q9UJV9 622 aaKnown RBP6.91□□□□□ -1.3
CLCN3-201ENST00000347613 UBAP1LF5GYI3 381 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 SEC31AO94979 1220 aaKnown RBP6.91□□□□□ -1.3
CLCN3-201ENST00000347613 GOLGA8HP0CJ92 632 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 PARP10Q53GL7 1025 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 TMTC3Q6ZXV5 915 aa6.91□□□□□ -1.3
CLCN3-201ENST00000347613 PRPF3O43395 683 aaKnown RBP6.9□□□□□ -1.3
CLCN3-201ENST00000347613 EDIL3O43854 480 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 FXR1P51114 621 aaKnown RBP eCLIP6.9□□□□□ -1.3
CLCN3-201ENST00000347613 RBL2Q08999 1139 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 NAALADL2Q58DX5 795 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 PDXDC2PQ6P474 469 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 KIFC2Q96AC6 838 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 RNF26Q9BY78 433 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-201ENST00000347613 BTAF1O14981 1849 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 TRIM49BA6NDI0 452 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 M0R2N6 131 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 MCM7P33993 719 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 PBX1P40424 430 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 KARSQ15046 597 aaKnown RBP6.9□□□□□ -1.3
CLCN3-201ENST00000347613 RILPL1Q5EBL4 403 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 IRF2BP1Q8IU81 584 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 ESR2Q92731 530 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 ARHGEF1Q92888 912 aaKnown RBP6.9□□□□□ -1.3
CLCN3-201ENST00000347613 NACAP1Q9BZK3 213 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 PRDM16Q9HAZ2 1276 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 GDAQ9Y2T3 454 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 PPP2R2CQ9Y2T4 447 aa6.9□□□□□ -1.3
CLCN3-201ENST00000347613 DDX60LQ5H9U9 1706 aaKnown RBP6.9□□□□□ -1.3
CLCN3-201ENST00000347613 GNAT2P19087 354 aa6.9□□□□□ -1.31
CLCN3-201ENST00000347613 GSDMDP57764 484 aa6.9□□□□□ -1.31
CLCN3-201ENST00000347613 RPS8P62241 208 aaKnown RBP6.9□□□□□ -1.31
CLCN3-201ENST00000347613 UBE4AQ14139 1066 aa6.9□□□□□ -1.31
CLCN3-201ENST00000347613 OLFM4Q6UX06 510 aa6.9□□□□□ -1.31
CLCN3-201ENST00000347613 LRRC4BQ9NT99 713 aa6.9□□□□□ -1.31
CLCN3-201ENST00000347613 CCDC88AQ3V6T2 1871 aa6.9□□□□□ -1.31
CLCN3-201ENST00000347613 COL24A1Q17RW2 1714 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 PSDA5PKW4 1024 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 NEMFO60524 1076 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 SASH3O75995 380 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 DMTNQ08495 405 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 CLEC10AQ8IUN9 316 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 TRIM22Q8IYM9 498 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 ENOX1Q8TC92 643 aaKnown RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 HPS3Q969F9 1004 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 BRIP1Q9BX63 1249 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 SAP30BPQ9UHR5 308 aaKnown RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 MAD2L2Q9UI95 211 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 FHOD1Q9Y613 1164 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 A0A1B0GTH6 734 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 TOP1P11387 765 aaKnown RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 H2AFXP16104 143 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 KRT2P35908 639 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 CCT6AP40227 531 aaKnown RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 CLCN6P51797 869 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 ETF1P62495 437 aaKnown RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 SLC10A5Q5PT55 438 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 CDKAL1Q5VV42 579 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 CPLX2Q6PUV4 134 aaKnown RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 ZNF579Q8NAF0 562 aaKnown RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 SMARCE1Q969G3 411 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 CARD6Q9BX69 1037 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 TRIM10Q9UDY6 481 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 ADAMTSL1Q8N6G6 1762 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 TAF1LQ8IZX4 1826 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 RASSF10A6NK89 507 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 SLU7O95391 586 aaKnown RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 GYPCP04921 128 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 ERVK-24P63145 666 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 SMAP1Q8IYB5 467 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 CCDC150Q8NCX0 1101 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 GJA10Q969M2 543 aa6.89□□□□□ -1.31
CLCN3-201ENST00000347613 ADD3Q9UEY8 706 aaKnown RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 MORC2Q9Y6X9 1032 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-201ENST00000347613 ERICH2A1L162 156 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 TRIM75PA6NK02 468 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 GNPATO15228 680 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 SLFN14P0C7P3 912 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 HIBADHP31937 336 aaKnown RBP6.88□□□□□ -1.31
CLCN3-201ENST00000347613 CASP14P31944 242 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 KLK7P49862 253 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 ATP2C1P98194 919 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-201ENST00000347613 TFAP4Q01664 338 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 ZRSR1Q15695 479 aaKnown RBP6.88□□□□□ -1.31
CLCN3-201ENST00000347613 SHROOM1Q2M3G4 852 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms