RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 KRT14P02533 472 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 RABL6Q3YEC7 729 aaPredicted RBP17.22■□□□□ 0.35
LMNA-201ENST00000347559 ELOA2Q8IYF1 753 aaPredicted RBP17.22■□□□□ 0.35
LMNA-201ENST00000347559 IP6K1Q92551 441 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 PAGE5Q96GU1 130 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 SLIT1O75093 1534 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 CPDO75976 1380 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 SH2B2O14492 632 aaPredicted RBP17.21■□□□□ 0.35
LMNA-201ENST00000347559 IFT88Q13099 833 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 TMEM67Q5HYA8 995 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 PAPD7Q5XG87 772 aaKnown RBP17.21■□□□□ 0.35
LMNA-201ENST00000347559 RPGRIP1Q96KN7 1286 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 PUS3Q9BZE2 481 aaKnown RBP17.21■□□□□ 0.35
LMNA-201ENST00000347559 LACRTQ9GZZ8 138 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 KLC4Q9NSK0 619 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 SMARCAL1Q9NZC9 954 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 FECHP22830 423 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 SEC24CP53992 1094 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 TTF1Q15361 905 aaPredicted RBP17.21■□□□□ 0.35
LMNA-201ENST00000347559 VEZTQ9HBM0 779 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 LUC7L2Q9Y383 392 aaKnown RBP17.21■□□□□ 0.35
LMNA-201ENST00000347559 ITIH6Q6UXX5 1313 aa17.21■□□□□ 0.35
LMNA-201ENST00000347559 KRT86O43790 486 aa17.21■□□□□ 0.34
LMNA-201ENST00000347559 CDR1P51861 262 aa17.21■□□□□ 0.34
LMNA-201ENST00000347559 CYP27A1Q02318 531 aa17.21■□□□□ 0.34
LMNA-201ENST00000347559 NTRK3Q16288 839 aa17.21■□□□□ 0.34
LMNA-201ENST00000347559 RILPL1Q5EBL4 403 aa17.21■□□□□ 0.34
LMNA-201ENST00000347559 OR8K1Q8NGG5 319 aa17.21■□□□□ 0.34
LMNA-201ENST00000347559 SPATA20Q8TB22 786 aa17.21■□□□□ 0.34
LMNA-201ENST00000347559 OXER1Q8TDS5 423 aa17.21■□□□□ 0.34
LMNA-201ENST00000347559 SLC24A3Q9HC58 644 aa17.21■□□□□ 0.34
LMNA-201ENST00000347559 SRPRBQ9Y5M8 271 aaKnown RBP17.21■□□□□ 0.34
LMNA-201ENST00000347559 KCNJ18B7U540 433 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 NEBLO76041 1014 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 FSBPO95073 299 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 ADORA1P30542 326 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 APBA1Q02410 837 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 NNTQ13423 1086 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 SF3B2Q13435 895 aaKnown RBP17.2■□□□□ 0.34
LMNA-201ENST00000347559 KCNJ12Q14500 433 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 CEP85LQ5SZL2 805 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 DHX37Q8IY37 1157 aaKnown RBP17.2■□□□□ 0.34
LMNA-201ENST00000347559 RCCD1A6NED2 376 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 IPO7O95373 1038 aaKnown RBP17.2■□□□□ 0.34
LMNA-201ENST00000347559 MMP1P03956 469 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 SCARF1Q14162 830 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 CCDC40Q4G0X9 1142 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 CCDC85AQ96PX6 553 aaPredicted RBP17.2■□□□□ 0.34
LMNA-201ENST00000347559 VPS54Q9P1Q0 977 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.2■□□□□ 0.34
LMNA-201ENST00000347559 SLC12A7Q9Y666 1083 aa17.2■□□□□ 0.34
LMNA-201ENST00000347559 FAM205CA6NFA0 338 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 CXCR5P32302 372 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 ZAP70P43403 619 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 MICALCLQ6ZW33 695 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 KIRREL3Q8IZU9 778 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
LMNA-201ENST00000347559 KCNG1Q9UIX4 513 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 KDM3BQ7LBC6 1761 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 NAA35Q5VZE5 725 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 IQCEQ6IPM2 695 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 GPIHBP1Q8IV16 184 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 SYMPKQ92797 1274 aaKnown RBP17.19■□□□□ 0.34
LMNA-201ENST00000347559 RNPC3Q96LT9 517 aaKnown RBP17.19■□□□□ 0.34
LMNA-201ENST00000347559 SCLT1Q96NL6 688 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 FAM217BQ9NTX9 383 aaPredicted RBP17.19■□□□□ 0.34
LMNA-201ENST00000347559 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
LMNA-201ENST00000347559 SATB1Q01826 763 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 DDR1Q08345 913 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 APPBP2Q92624 585 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 MIEF2Q96C03 454 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 EEF2KMTQ96G04 330 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 EHD2Q9NZN4 543 aa17.19■□□□□ 0.34
LMNA-201ENST00000347559 IFIT3O14879 490 aaKnown RBP17.18■□□□□ 0.34
LMNA-201ENST00000347559 PAX7P23759 505 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 LSP1P33241 339 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 E2F5Q15329 346 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 AMOTQ4VCS5 1084 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 IQCA1Q86XH1 822 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 MCM8Q9UJA3 840 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 PXDNQ92626 1479 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 SEMA3EO15041 775 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 ATP2C2O75185 946 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 NAP1L1P55209 391 aaKnown RBP17.18■□□□□ 0.34
LMNA-201ENST00000347559 TRIM14Q14142 442 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 TCP11X2Q5H9J9 407 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 RRP12Q5JTH9 1297 aaKnown RBP17.18■□□□□ 0.34
LMNA-201ENST00000347559 LRCH2Q5VUJ6 765 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 CCDC13Q8IYE1 715 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 CCDC114Q96M63 670 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 ZIM3Q96PE6 472 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 ZKSCAN3Q9BRR0 538 aa17.18■□□□□ 0.34
LMNA-201ENST00000347559 LIMA1Q9UHB6 759 aaKnown RBP17.18■□□□□ 0.34
LMNA-201ENST00000347559 PIK3C2AO00443 1686 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 CCDC189A1A4V9 331 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 LTKP29376 864 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 KRT83P78385 493 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms