RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 WDR46O15213 610 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-201ENST00000346501 PRDM1O75626 825 aa18.72■□□□□ 0.59
TSPAN4-201ENST00000346501 GRK4P32298 578 aa18.72■□□□□ 0.59
TSPAN4-201ENST00000346501 MLLT1Q03111 559 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-201ENST00000346501 PRKCZQ05513 592 aa18.72■□□□□ 0.59
TSPAN4-201ENST00000346501 CWC27Q6UX04 472 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-201ENST00000346501 SLAIN1Q8ND83 568 aa18.72■□□□□ 0.59
TSPAN4-201ENST00000346501 TOMM22Q9NS69 142 aa18.72■□□□□ 0.59
TSPAN4-201ENST00000346501 NYAP2Q9P242 653 aa18.72■□□□□ 0.59
TSPAN4-201ENST00000346501 TSPY2A6NKD2 308 aa18.71■□□□□ 0.59
TSPAN4-201ENST00000346501 FLOT1O75955 427 aa18.71■□□□□ 0.59
TSPAN4-201ENST00000346501 HSPD1P10809 573 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-201ENST00000346501 FLT3LGP49771 235 aa18.71■□□□□ 0.59
TSPAN4-201ENST00000346501 ERVK-9P63128 1117 aa18.71■□□□□ 0.59
TSPAN4-201ENST00000346501 ERVK-24P63145 666 aa18.71■□□□□ 0.59
TSPAN4-201ENST00000346501 CAP1Q01518 475 aa18.71■□□□□ 0.59
TSPAN4-201ENST00000346501 SPICE1Q8N0Z3 855 aa18.71■□□□□ 0.59
TSPAN4-201ENST00000346501 MB21D1Q8N884 522 aa18.71■□□□□ 0.59
TSPAN4-201ENST00000346501 RUFY2Q8WXA3 655 aa18.71■□□□□ 0.59
TSPAN4-201ENST00000346501 ADCY3O60266 1144 aa18.7■□□□□ 0.58
TSPAN4-201ENST00000346501 CTGFP29279 349 aa18.7■□□□□ 0.58
TSPAN4-201ENST00000346501 TFAP4Q01664 338 aa18.7■□□□□ 0.58
TSPAN4-201ENST00000346501 IRF5Q13568 498 aa18.7■□□□□ 0.58
TSPAN4-201ENST00000346501 TTC22Q5TAA0 569 aa18.7■□□□□ 0.58
TSPAN4-201ENST00000346501 CLEC10AQ8IUN9 316 aa18.7■□□□□ 0.58
TSPAN4-201ENST00000346501 SOCS4Q8WXH5 440 aa18.7■□□□□ 0.58
TSPAN4-201ENST00000346501 RBPJLQ9UBG7 517 aa18.7■□□□□ 0.58
TSPAN4-201ENST00000346501 CLIP2Q9UDT6 1046 aa18.7■□□□□ 0.58
TSPAN4-201ENST00000346501 IVNS1ABPQ9Y6Y0 642 aa18.7■□□□□ 0.58
TSPAN4-201ENST00000346501 TTLL1O95922 423 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 FGAP02671 866 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 RGS19P49795 217 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 VPS53Q5VIR6 699 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 WDR78Q5VTH9 848 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 SAMD1Q6SPF0 538 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 LBX2Q6XYB7 198 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 CENPQQ7L2Z9 268 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 NEDD1Q8NHV4 660 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 PXYLP1Q8TE99 480 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 SH3TC2Q8TF17 1288 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 ZNF333Q96JL9 665 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 NUDT12Q9BQG2 462 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 RNF41Q9H4P4 317 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 ANAPC4Q9UJX5 808 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 SYNPO2Q9UMS6 1093 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 ZMYM6O95789 1325 aa18.69■□□□□ 0.58
TSPAN4-201ENST00000346501 RANBP6O60518 1105 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-201ENST00000346501 PCP11498 1178 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-201ENST00000346501 PDE4AP27815 886 aa18.68■□□□□ 0.58
TSPAN4-201ENST00000346501 CTDSPL2Q05D32 466 aa18.68■□□□□ 0.58
TSPAN4-201ENST00000346501 SIAH1Q8IUQ4 282 aa18.68■□□□□ 0.58
TSPAN4-201ENST00000346501 TXNRD2Q9NNW7 524 aa18.68■□□□□ 0.58
TSPAN4-201ENST00000346501 MTMR4Q9NYA4 1195 aa18.68■□□□□ 0.58
TSPAN4-201ENST00000346501 CTNNA3Q9UI47 895 aa18.68■□□□□ 0.58
TSPAN4-201ENST00000346501 GABRQQ9UN88 632 aa18.68■□□□□ 0.58
TSPAN4-201ENST00000346501 CTDP1Q9Y5B0 961 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-201ENST00000346501 MGAMO43451 1857 aa18.67■□□□□ 0.58
TSPAN4-201ENST00000346501 SPDYE16A6NNV3 312 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-201ENST00000346501 ZNF213O14771 459 aa18.67■□□□□ 0.58
TSPAN4-201ENST00000346501 FAM47AQ5JRC9 791 aa18.67■□□□□ 0.58
TSPAN4-201ENST00000346501 PLEKHH3Q7Z736 793 aa18.67■□□□□ 0.58
TSPAN4-201ENST00000346501 ZNF589Q86UQ0 364 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-201ENST00000346501 CEP95Q96GE4 821 aa18.67■□□□□ 0.58
TSPAN4-201ENST00000346501 ISY1Q9ULR0 285 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-201ENST00000346501 F5H6K3 240 aa18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 MYCP01106 439 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 DSG3P32926 999 aa18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 NT5C2P49902 561 aa18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 KLRC3Q07444 240 aa18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 PLS1Q14651 629 aa18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 RRP12Q5JTH9 1297 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 MFSD6Q6ZSS7 791 aa18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 TRMT44Q8IYL2 757 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 NKX2-3Q8TAU0 364 aa18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 PLIN4Q96Q06 1357 aa18.66■□□□□ 0.58
TSPAN4-201ENST00000346501 ZSWIM8A7E2V4 1837 aa18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 ORC4O43929 436 aa18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 IMMTQ16891 758 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 Q3C1V9 767 aa18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 FAM83BQ5T0W9 1011 aa18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 GPR142Q7Z601 462 aa18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 MKL1Q969V6 931 aa18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 CCDC136Q96JN2 1154 aa18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 DSCC1Q9BVC3 393 aa18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 STX8Q9UNK0 236 aa18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 RAD50Q92878 1312 aa18.65■□□□□ 0.58
TSPAN4-201ENST00000346501 IGKV6D-41A0A0C4DH26 115 aa18.64■□□□□ 0.57
TSPAN4-201ENST00000346501 FOXP2O15409 715 aa18.64■□□□□ 0.57
TSPAN4-201ENST00000346501 CENPBP07199 599 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-201ENST00000346501 RGS2P41220 211 aa18.64■□□□□ 0.57
TSPAN4-201ENST00000346501 HAND2P61296 217 aa18.64■□□□□ 0.57
TSPAN4-201ENST00000346501 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
TSPAN4-201ENST00000346501 NDUFB10O96000 172 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 GSPT1P15170 499 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 ELNP15502 786 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 CYP2B6P20813 491 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 COPB2P35606 906 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 IKQ13123 557 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 KIAA1755Q5JYT7 1200 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms