RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 SRCAPQ6ZRS2 3230 aa29.09■■■□□ 2.25
TRADD-201ENST00000345057 PALM3A6NDB9 673 aaPredicted RBP29.08■■■□□ 2.25
TRADD-201ENST00000345057 MAP3K11Q16584 847 aa29.08■■■□□ 2.25
TRADD-201ENST00000345057 TRIM34Q9BYJ4 488 aa29.08■■■□□ 2.25
TRADD-201ENST00000345057 CLSTN2Q9H4D0 955 aa29.08■■■□□ 2.25
TRADD-201ENST00000345057 VPS54Q9P1Q0 977 aa29.08■■■□□ 2.25
TRADD-201ENST00000345057 PARP1P09874 1014 aaKnown RBP29.08■■■□□ 2.25
TRADD-201ENST00000345057 FOXP4Q8IVH2 680 aaPredicted RBP29.08■■■□□ 2.25
TRADD-201ENST00000345057 MRPS27Q92552 414 aaKnown RBP29.08■■■□□ 2.25
TRADD-201ENST00000345057 TNMDQ9H2S6 317 aa29.08■■■□□ 2.25
TRADD-201ENST00000345057 FAM198AQ9UFP1 575 aa29.08■■■□□ 2.25
TRADD-201ENST00000345057 IGKV6D-41A0A0C4DH26 115 aa29.07■■■□□ 2.24
TRADD-201ENST00000345057 PSMD14O00487 310 aa29.07■■■□□ 2.24
TRADD-201ENST00000345057 SHMT1P34896 483 aa29.07■■■□□ 2.24
TRADD-201ENST00000345057 AGBL3Q8NEM8 1001 aa29.07■■■□□ 2.24
TRADD-201ENST00000345057 TAOK3Q9H2K8 898 aa29.07■■■□□ 2.24
TRADD-201ENST00000345057 CALML3P27482 149 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 FAM160A1Q05DH4 1040 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.06■■■□□ 2.24
TRADD-201ENST00000345057 CEP131Q9UPN4 1083 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 CTAGE5O15320 804 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 NR1I2O75469 434 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 RAD17O75943 681 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 TTLL1O95922 423 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 AKR1B1P15121 316 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 MMP14P50281 582 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 ZSCAN29Q8IWY8 852 aaPredicted RBP29.06■■■□□ 2.24
TRADD-201ENST00000345057 GMLQ99445 158 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 SPZ1Q9BXG8 430 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 ATRNL1Q5VV63 1379 aa29.06■■■□□ 2.24
TRADD-201ENST00000345057 FSIP1Q8NA03 581 aa29.05■■■□□ 2.24
TRADD-201ENST00000345057 RBSNQ9H1K0 784 aa29.05■■■□□ 2.24
TRADD-201ENST00000345057 BRCA1P38398 1863 aaKnown RBP29.04■■■□□ 2.24
TRADD-201ENST00000345057 TCP10Q12799 353 aa29.04■■■□□ 2.24
TRADD-201ENST00000345057 STAG2Q8N3U4 1231 aa29.04■■■□□ 2.24
TRADD-201ENST00000345057 JDP2Q8WYK2 163 aa29.04■■■□□ 2.24
TRADD-201ENST00000345057 TDRD3Q9H7E2 651 aaKnown RBP29.04■■■□□ 2.24
TRADD-201ENST00000345057 PCDHAC2Q9Y5I4 1007 aa29.04■■■□□ 2.24
TRADD-201ENST00000345057 KINO60870 393 aaKnown RBP29.04■■■□□ 2.24
TRADD-201ENST00000345057 CCDC192P0DO97 292 aa29.04■■■□□ 2.24
TRADD-201ENST00000345057 DLGAP5Q15398 846 aa29.04■■■□□ 2.24
TRADD-201ENST00000345057 hCG_1642624A0A1W2PR95 340 aa29.03■■■□□ 2.24
TRADD-201ENST00000345057 SPDYE2BA6NHP3 402 aa29.03■■■□□ 2.24
TRADD-201ENST00000345057 KLRF2D3W0D1 207 aa29.03■■■□□ 2.24
TRADD-201ENST00000345057 SPDYE6P0CI01 402 aa29.03■■■□□ 2.24
TRADD-201ENST00000345057 RBM43Q6ZSC3 357 aaKnown RBP29.03■■■□□ 2.24
TRADD-201ENST00000345057 CCDC148Q8NFR7 591 aa29.03■■■□□ 2.24
TRADD-201ENST00000345057 NOL7Q9UMY1 257 aaKnown RBP29.03■■■□□ 2.24
TRADD-201ENST00000345057 CACNB3P54284 484 aa29.02■■■□□ 2.24
TRADD-201ENST00000345057 NLRP5P59047 1200 aa29.02■■■□□ 2.24
TRADD-201ENST00000345057 NR5A1Q13285 461 aa29.02■■■□□ 2.24
TRADD-201ENST00000345057 PTPAQ15257 358 aa29.02■■■□□ 2.24
TRADD-201ENST00000345057 ASPRV1Q53RT3 343 aa29.02■■■□□ 2.24
TRADD-201ENST00000345057 GALNT17Q6IS24 598 aa29.02■■■□□ 2.24
TRADD-201ENST00000345057 PRMT6Q96LA8 375 aaPredicted RBP29.02■■■□□ 2.24
TRADD-201ENST00000345057 FER1L6Q2WGJ9 1857 aa29.02■■■□□ 2.24
TRADD-201ENST00000345057 METTL16Q86W50 562 aaKnown RBP29.02■■■□□ 2.24
TRADD-201ENST00000345057 ZFPM1Q8IX07 1006 aa29.02■■■□□ 2.24
TRADD-201ENST00000345057 MTMR14Q8NCE2 650 aa29.02■■■□□ 2.24
TRADD-201ENST00000345057 SGIP1Q9BQI5 828 aa29.02■■■□□ 2.24
TRADD-201ENST00000345057 PPP1R1BQ9UD71 204 aaPredicted RBP29.02■■■□□ 2.24
TRADD-201ENST00000345057 MORC2Q9Y6X9 1032 aaPredicted RBP29.02■■■□□ 2.24
TRADD-201ENST00000345057 DDTLA6NHG4 134 aaPredicted RBP29.01■■■□□ 2.23
TRADD-201ENST00000345057 BMP15O95972 392 aa29.01■■■□□ 2.23
TRADD-201ENST00000345057 CMA1P23946 247 aa29.01■■■□□ 2.23
TRADD-201ENST00000345057 COL4A5P29400 1685 aa29.01■■■□□ 2.23
TRADD-201ENST00000345057 MPHOSPH10O00566 681 aaKnown RBP29■■■□□ 2.23
TRADD-201ENST00000345057 ENGASEQ8NFI3 743 aa29■■■□□ 2.23
TRADD-201ENST00000345057 OXER1Q8TDS5 423 aa29■■■□□ 2.23
TRADD-201ENST00000345057 CCDC12Q8WUD4 166 aaPredicted RBP29■■■□□ 2.23
TRADD-201ENST00000345057 GREB1LQ9C091 1923 aaPredicted RBP29■■■□□ 2.23
TRADD-201ENST00000345057 CERKLQ49MI3 558 aaPredicted RBP29■■■□□ 2.23
TRADD-201ENST00000345057 FUCA2Q9BTY2 467 aa29■■■□□ 2.23
TRADD-201ENST00000345057 GOLPH3LQ9H4A5 285 aa29■■■□□ 2.23
TRADD-201ENST00000345057 CABP5Q9NP86 173 aa29■■■□□ 2.23
TRADD-201ENST00000345057 MTMR7Q9Y216 660 aa29■■■□□ 2.23
TRADD-201ENST00000345057 CUTAO60888 179 aa28.99■■■□□ 2.23
TRADD-201ENST00000345057 SNW1Q13573 536 aaKnown RBP28.99■■■□□ 2.23
TRADD-201ENST00000345057 TNIP1Q15025 636 aa28.99■■■□□ 2.23
TRADD-201ENST00000345057 CAMK4Q16566 473 aa28.99■■■□□ 2.23
TRADD-201ENST00000345057 FKBP1CQ5VVH2 108 aa28.99■■■□□ 2.23
TRADD-201ENST00000345057 CIAPIN1Q6FI81 312 aa28.99■■■□□ 2.23
TRADD-201ENST00000345057 TATDN1Q6P1N9 297 aa28.99■■■□□ 2.23
TRADD-201ENST00000345057 SHISA4Q96DD7 197 aa28.99■■■□□ 2.23
TRADD-201ENST00000345057 RRP36Q96EU6 259 aaKnown RBP28.99■■■□□ 2.23
TRADD-201ENST00000345057 PANK2Q9BZ23 570 aa28.99■■■□□ 2.23
TRADD-201ENST00000345057 CLIP2Q9UDT6 1046 aa28.99■■■□□ 2.23
TRADD-201ENST00000345057 SNHG28P0DPA3 235 aa28.98■■■□□ 2.23
TRADD-201ENST00000345057 PDHBP11177 359 aa28.98■■■□□ 2.23
TRADD-201ENST00000345057 TOB1P50616 345 aaPredicted RBP28.98■■■□□ 2.23
TRADD-201ENST00000345057 AXDND1Q5T1B0 1012 aaPredicted RBP28.98■■■□□ 2.23
TRADD-201ENST00000345057 SH3BP5LQ7L8J4 393 aa28.98■■■□□ 2.23
TRADD-201ENST00000345057 SEC63Q9UGP8 760 aaKnown RBP28.98■■■□□ 2.23
TRADD-201ENST00000345057 LTBP3Q9NS15 1303 aa28.98■■■□□ 2.23
TRADD-201ENST00000345057 hCG_1984214I3L0E3 225 aa28.97■■■□□ 2.23
TRADD-201ENST00000345057 TRAPPC10P48553 1259 aa28.97■■■□□ 2.23
TRADD-201ENST00000345057 ZNF713Q8N859 430 aaPredicted RBP28.97■■■□□ 2.23
TRADD-201ENST00000345057 DNAJC18Q9H819 358 aa28.97■■■□□ 2.23
TRADD-201ENST00000345057 KANSL2Q9H9L4 492 aa28.97■■■□□ 2.23
TRADD-201ENST00000345057 HERC5Q9UII4 1024 aaKnown RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms