RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 JAG1P78504 1218 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 ANO1Q5XXA6 986 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 ATL3Q6DD88 541 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 NOSTRINQ8IVI9 506 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
CDC42-202ENST00000344548 RGS22Q8NE09 1264 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 BICD2Q8TD16 824 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 SCAF8Q9UPN6 1271 aaKnown RBP15.69■□□□□ 0.1
CDC42-202ENST00000344548 GOLGA6L4A6NEF3 574 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 WNT7AO00755 349 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 MARCKSP29966 332 aaPredicted RBP15.69■□□□□ 0.1
CDC42-202ENST00000344548 ME1P48163 572 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 AKAP17AQ02040 695 aaKnown RBP15.69■□□□□ 0.1
CDC42-202ENST00000344548 RASSF7Q02833 373 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 GNL2Q13823 731 aaKnown RBP15.69■□□□□ 0.1
CDC42-202ENST00000344548 RRP1BQ14684 758 aaKnown RBP15.69■□□□□ 0.1
CDC42-202ENST00000344548 NIM1KQ8IY84 436 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 GPKOWQ92917 476 aaPredicted RBP eCLIP15.69■□□□□ 0.12e-6■■□□□ 13.7
CDC42-202ENST00000344548 TAOK3Q9H2K8 898 aa15.69■□□□□ 0.1
CDC42-202ENST00000344548 MYH8P13535 1937 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 USP17L5A8MUK1 530 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 TCP10L2B9ZVM9 353 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 MRE11P49959 708 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 PTPAQ15257 358 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 CCAR1Q8IX12 1150 aaKnown RBP15.68■□□□□ 0.1
CDC42-202ENST00000344548 PLIN4Q96Q06 1357 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 EGFRP00533 1210 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 HLA-DOAP06340 250 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 TOP1P11387 765 aaKnown RBP15.68■□□□□ 0.1
CDC42-202ENST00000344548 KIF5BP33176 963 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 NT5C2P49902 561 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 SNW1Q13573 536 aaKnown RBP15.68■□□□□ 0.1
CDC42-202ENST00000344548 STK38Q15208 465 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 PFKFB3Q16875 520 aaPredicted RBP15.68■□□□□ 0.1
CDC42-202ENST00000344548 SYAP1Q96A49 352 aaPredicted RBP15.68■□□□□ 0.1
CDC42-202ENST00000344548 CLIP2Q9UDT6 1046 aa15.68■□□□□ 0.1
CDC42-202ENST00000344548 KLRF2D3W0D1 207 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 MPHOSPH10O00566 681 aaKnown RBP15.67■□□□□ 0.1
CDC42-202ENST00000344548 SPTLC2O15270 562 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 SCG2P13521 617 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 CCDC178Q5BJE1 867 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 AXDND1Q5T1B0 1012 aaPredicted RBP15.67■□□□□ 0.1
CDC42-202ENST00000344548 RNF214Q8ND24 703 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 UBA5Q9GZZ9 404 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 EHD4Q9H223 541 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 CABP5Q9NP86 173 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 PI4KBQ9UBF8 816 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 SWAP70Q9UH65 585 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 CD2APQ9Y5K6 639 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 MRVI1Q9Y6F6 885 aa15.67■□□□□ 0.1
CDC42-202ENST00000344548 FRMPD2Q68DX3 1309 aaPredicted RBP15.67■□□□□ 0.1
CDC42-202ENST00000344548 YEATS4O95619 227 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 PDHBP11177 359 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 SLC39A14Q15043 492 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 L1TD1Q5T7N2 865 aaKnown RBP15.66■□□□□ 0.1
CDC42-202ENST00000344548 SOGA3Q5TF21 947 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 ENGASEQ8NFI3 743 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 FUCA2Q9BTY2 467 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 FOXP1Q9H334 677 aaPredicted RBP15.66■□□□□ 0.1
CDC42-202ENST00000344548 PCDHB6Q9Y5E3 794 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 A0A1B0GVL5 298 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 ATP2B1P20020 1258 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 SIAH1Q8IUQ4 282 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 TNFRSF25Q93038 417 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 DHX36Q9H2U1 1008 aaKnown RBP15.66■□□□□ 0.1
CDC42-202ENST00000344548 ZNF70Q9UC06 446 aaPredicted RBP15.66■□□□□ 0.1
CDC42-202ENST00000344548 GREB1LQ9C091 1923 aaPredicted RBP15.66■□□□□ 0.1
CDC42-202ENST00000344548 MYO3BQ8WXR4 1341 aa15.66■□□□□ 0.1
CDC42-202ENST00000344548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.65■□□□□ 0.1
CDC42-202ENST00000344548 GDF11O95390 407 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 DLGAP5Q15398 846 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 NBPF9Q3BBW0 867 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 CKAP2LQ8IYA6 745 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 CLIC6Q96NY7 704 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 VPS33BQ9H267 617 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 CNTNAP1P78357 1384 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
CDC42-202ENST00000344548 GRIN1Q05586 938 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 SAFBQ15424 915 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDC42-202ENST00000344548 WWC2Q6AWC2 1192 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 ADALQ6DHV7 355 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 TATDN1Q6P1N9 297 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 FSIP1Q8NA03 581 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 VAT1LQ9HCJ6 419 aa15.65■□□□□ 0.1
CDC42-202ENST00000344548 ISY1Q9ULR0 285 aaKnown RBP15.65■□□□□ 0.1
CDC42-202ENST00000344548 ATRNL1Q5VV63 1379 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 NDUFA8P51970 172 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 ATP2B2Q01814 1243 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 OGFOD1Q8N543 542 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 NUP62CLQ9H1M0 184 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 ENTPD3O75355 529 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 TTLL1O95922 423 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 PARP1P09874 1014 aaKnown RBP15.64■□□□□ 0.09
CDC42-202ENST00000344548 CERKLQ49MI3 558 aaPredicted RBP15.64■□□□□ 0.09
CDC42-202ENST00000344548 CIAPIN1Q6FI81 312 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 TTBK2Q6IQ55 1244 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 RASGRP4Q8TDF6 673 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 KCNG4Q8TDN1 519 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms