RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 MEFVO15553 781 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 TTC7AQ9ULT0 858 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 POLR3AO14802 1390 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 SUN1O94901 812 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 KRT15P19012 456 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 STX1BP61266 288 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 ITGA9Q13797 1035 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 TRIM71Q2Q1W2 868 aaKnown RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 ZFYVE27Q5T4F4 411 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 HORMAD1Q86X24 394 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 ATPIF1Q9UII2 106 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 TRIM17Q9Y577 477 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 RNMTO43148 476 aaKnown RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 GIN1Q9NXP7 522 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 BAG2O95816 211 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 S100A9P06702 114 aaKnown RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 HNRNPMP52272 730 aaKnown RBP eCLIP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 CATSPER1Q8NEC5 780 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 SIRT1Q96EB6 747 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 MAP3K7O43318 606 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 PCGF5Q86SE9 256 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 ZMYND8Q9ULU4 1186 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 KIF24Q5T7B8 1368 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 TMEM110-MUSTN1A8MSY1 372 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 TMEM110Q86TL2 294 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 CCDC51Q96ER9 411 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 ZSCAN16Q9H4T2 348 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 APOL1O14791 398 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 CCNG1P51959 295 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 LRRC8BQ6P9F7 803 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 OTUD5Q96G74 571 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 XAB2Q9HCS7 855 aaKnown RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 ANGPTL2Q9UKU9 493 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 TSC22D2O75157 780 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 LONP1P36776 959 aaKnown RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 AARSP49588 968 aaKnown RBP eCLIP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 MYOM3Q5VTT5 1437 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 RIMS2Q9UQ26 1411 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 RPL26P61254 145 aaKnown RBP4.15□□□□□ -1.75
SYNE2-202ENST00000344113 SNX29Q8TEQ0 813 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 COMMD3-BMI1R4GMX3 469 aa4.15□□□□□ -1.75
SYNE2-202ENST00000344113 BMP15O95972 392 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 ATAD3BQ5T9A4 648 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 TRIM42Q8IWZ5 723 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 VPS50Q96JG6 964 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 SPINK5Q9NQ38 1064 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 MTRF1LQ9UGC7 380 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 STRNO43815 780 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CNGA2Q16280 664 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 KRT27Q7Z3Y8 459 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 JPH2Q9BR39 696 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 POLKQ9UBT6 870 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 IPPQ9Y573 584 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 COPB1P53618 953 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CYTH2Q99418 400 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 KRT18P05783 430 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 DNAJC3Q13217 504 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CEP78Q5JTW2 689 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 MFSD4BQ5TF39 518 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 HPS1Q92902 700 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.14□□□□□ -1.755e-6■■■□□ 16.3
SYNE2-202ENST00000344113 ACAD8Q9UKU7 415 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 ADKP55263 362 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 ARHGEF25Q86VW2 580 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CCDC89Q8N998 374 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 KLHL14Q9P2G3 628 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 G3BP2Q9UN86 482 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 IFIT2P09913 472 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 GYS2P54840 703 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 FAM133BQ5BKY9 247 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 SPATA7Q9P0W8 599 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 FOXP2O15409 715 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 VPS41P49754 854 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CCT8P50990 548 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 IFT88Q13099 833 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 HLTFQ14527 1009 aaKnown RBP eCLIP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 RBM20Q5T481 1227 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 HACD3Q9P035 362 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 TSC22D4Q9Y3Q8 395 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 MMEP08473 750 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 BNIP1Q12981 228 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 RBSNQ9H1K0 784 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 STK10O94804 968 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 KRT8P05787 483 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 RAD21L1Q9H4I0 556 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 ABCF3Q9NUQ8 709 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 SMIM31A0A1B0GVY4 71 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 MATN2O00339 956 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 MARCH10Q8NA82 808 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 ASZ1Q8WWH4 475 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CUL5Q93034 780 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 ATP8B4Q8TF62 1192 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 SPATA32Q96LK8 384 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 MRPS26Q9BYN8 205 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 IFT122Q9HBG6 1241 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 MCF2LO15068 1137 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 OPHN1O60890 802 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CCND1P24385 295 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms