RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 UBLCP1Q8WVY7 318 aaPredicted RBP12.16□□□□□ -0.46
RPL28-201ENST00000344063 ABCB6Q9NP58 842 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 BTG4Q9NY30 223 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 CDC23Q9UJX2 597 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 COL3A1P02461 1466 aaPredicted RBP12.16□□□□□ -0.46
RPL28-201ENST00000344063 HIBADHP31937 336 aaKnown RBP12.16□□□□□ -0.46
RPL28-201ENST00000344063 EPHA10Q5JZY3 1008 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 FAM71BQ8TC56 605 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 NELFBQ8WX92 580 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.16□□□□□ -0.46
RPL28-201ENST00000344063 PIK3C2BO00750 1634 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 PHLPP2Q6ZVD8 1323 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 H7C1W4 665 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 ERCC5P28715 1186 aaPredicted RBP12.16□□□□□ -0.46
RPL28-201ENST00000344063 TNNI2P48788 182 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 TRAF1Q13077 416 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
RPL28-201ENST00000344063 CDCA7Q9BWT1 371 aaPredicted RBP12.16□□□□□ -0.46
RPL28-201ENST00000344063 FOXP1Q9H334 677 aaPredicted RBP12.16□□□□□ -0.46
RPL28-201ENST00000344063 GJB4Q9NTQ9 266 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 FRMPD1Q5SYB0 1578 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 MAP3K15Q6ZN16 1313 aa12.16□□□□□ -0.46
RPL28-201ENST00000344063 SOWAHDA6NJG2 315 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 CTIFO43310 598 aaKnown RBP12.15□□□□□ -0.46
RPL28-201ENST00000344063 NEBLO76041 1014 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 PARP1P09874 1014 aaKnown RBP12.15□□□□□ -0.46
RPL28-201ENST00000344063 ICE2Q659A1 982 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 GIGYF2Q6Y7W6 1299 aaKnown RBP12.15□□□□□ -0.46
RPL28-201ENST00000344063 CMTR1Q8N1G2 835 aaKnown RBP12.15□□□□□ -0.46
RPL28-201ENST00000344063 LMBR1Q8WVP7 490 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 SAR1BQ9Y6B6 198 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 E7EVH7 732 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 AP5Z1O43299 807 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 GUCY2FP51841 1108 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 CTNNBL1Q8WYA6 563 aaPredicted RBP12.15□□□□□ -0.46
RPL28-201ENST00000344063 CCDC87Q9NVE4 849 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 DEPDC5O75140 1603 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 CPS1P31327 1500 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 PTPRUQ92729 1446 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 A0A1B0GUA9 196 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 CCDC151A5D8V7 595 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 ADD2P35612 726 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 WHAMMP3Q1A5X7 153 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 DDX17Q92841 729 aaKnown RBP12.15□□□□□ -0.46
RPL28-201ENST00000344063 RPGRIP1Q96KN7 1286 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 PAIP2Q9BPZ3 127 aaKnown RBP12.15□□□□□ -0.46
RPL28-201ENST00000344063 BAIAP2L1Q9UHR4 511 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 TNKSO95271 1327 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 ADGRB2O60241 1585 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 GRAMD1CQ8IYS0 662 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 ARFGAP2Q8N6H7 521 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 CABS1Q96KC9 395 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 CAPS2Q9BXY5 557 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 GOLPH3LQ9H4A5 285 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 EFCC1Q9HA90 598 aa12.15□□□□□ -0.46
RPL28-201ENST00000344063 AK9Q5TCS8 1911 aa12.15□□□□□ -0.47
RPL28-201ENST00000344063 TSPOAP1O95153 1857 aa12.15□□□□□ -0.47
RPL28-201ENST00000344063 PHKA1P46020 1223 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 KRT25Q7Z3Z0 450 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 ACRBPQ8NEB7 543 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 OR8K1Q8NGG5 319 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 IQCDQ96DY2 449 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 UBAP1LF5GYI3 381 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 ATP8B1O43520 1251 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 MRPS25P82663 173 aaKnown RBP12.14□□□□□ -0.47
RPL28-201ENST00000344063 ZRSR2Q15696 482 aaKnown RBP12.14□□□□□ -0.47
RPL28-201ENST00000344063 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPL28-201ENST00000344063 GREM2Q9H772 168 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPL28-201ENST00000344063 CASP14P31944 242 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 CYP2C19P33261 490 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 TNNC1P63316 161 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 TMEM132AQ24JP5 1023 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 RSRC1Q96IZ7 334 aaKnown RBP12.14□□□□□ -0.47
RPL28-201ENST00000344063 NAP1L4Q99733 375 aaKnown RBP12.14□□□□□ -0.47
RPL28-201ENST00000344063 LZTS2Q9BRK4 669 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 TRIM31Q9BZY9 425 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 EIF3CLB5ME19 914 aaKnown RBP12.14□□□□□ -0.47
RPL28-201ENST00000344063 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
RPL28-201ENST00000344063 PCP11498 1178 aaKnown RBP12.14□□□□□ -0.47
RPL28-201ENST00000344063 IFNAR1P17181 557 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 PPFIA1Q13136 1202 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 CASP8Q14790 479 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 KLHL7Q8IXQ5 586 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 TBC1D5Q92609 795 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 GSDMAQ96QA5 445 aa12.14□□□□□ -0.47
RPL28-201ENST00000344063 ZSCAN10Q96SZ4 725 aaPredicted RBP12.14□□□□□ -0.47
RPL28-201ENST00000344063 EIF3CQ99613 913 aaKnown RBP12.14□□□□□ -0.47
RPL28-201ENST00000344063 SH2B2O14492 632 aaPredicted RBP12.13□□□□□ -0.47
RPL28-201ENST00000344063 PRPHP41219 470 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 NONOQ15233 471 aaKnown RBP eCLIP12.13□□□□□ -0.47
RPL28-201ENST00000344063 SLFNL1Q499Z3 407 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 SMYD4Q8IYR2 804 aaPredicted RBP12.13□□□□□ -0.47
RPL28-201ENST00000344063 SMARCC2Q8TAQ2 1214 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 SECISBP2LQ93073 1101 aaKnown RBP12.13□□□□□ -0.47
RPL28-201ENST00000344063 RNF26Q9BY78 433 aaPredicted RBP12.13□□□□□ -0.47
RPL28-201ENST00000344063 IL25Q9H293 177 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 KIAA0753Q2KHM9 967 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms