RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SLIT1O75093 1534 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 MYH8P13535 1937 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 RCCD1A6NED2 376 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 IDEP14735 1019 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 ATP6V1AP38606 617 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 TUBB4BP68371 445 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 PPFIA1Q13136 1202 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 KCTD19Q17RG1 926 aaPredicted RBP16.72■□□□□ 0.27
CLCN1-201ENST00000343257 LY9Q9HBG7 655 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 DMGDHQ9UI17 866 aaKnown RBP16.72■□□□□ 0.27
CLCN1-201ENST00000343257 SUFUQ9UMX1 484 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 TRIM49BA6NDI0 452 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 WNT7AO00755 349 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 ZC3H6P61129 1189 aaKnown RBP16.72■□□□□ 0.27
CLCN1-201ENST00000343257 HERVK_113P62684 666 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 EARS2Q5JPH6 523 aaKnown RBP16.72■□□□□ 0.27
CLCN1-201ENST00000343257 CYB5RLQ6IPT4 315 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 OTUD6BQ8N6M0 293 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 IGDCC4Q8TDY8 1250 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 NLRP2Q9NX02 1062 aa16.72■□□□□ 0.27
CLCN1-201ENST00000343257 KCNJ18B7U540 433 aa16.71■□□□□ 0.27
CLCN1-201ENST00000343257 EIF3HO15372 352 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLCN1-201ENST00000343257 TUBBP07437 444 aa16.71■□□□□ 0.27
CLCN1-201ENST00000343257 CCDC172P0C7W6 258 aa16.71■□□□□ 0.27
CLCN1-201ENST00000343257 CHRM1P11229 460 aaPredicted RBP16.71■□□□□ 0.27
CLCN1-201ENST00000343257 KCNJ12Q14500 433 aa16.71■□□□□ 0.27
CLCN1-201ENST00000343257 SWT1Q5T5J6 900 aaKnown RBP16.71■□□□□ 0.27
CLCN1-201ENST00000343257 LRRC1Q9BTT6 524 aa16.71■□□□□ 0.27
CLCN1-201ENST00000343257 ZSWIM5Q9P217 1185 aa16.71■□□□□ 0.27
CLCN1-201ENST00000343257 SRPRBQ9Y5M8 271 aaKnown RBP16.71■□□□□ 0.27
CLCN1-201ENST00000343257 KIAA0754O94854 1291 aa16.71■□□□□ 0.27
CLCN1-201ENST00000343257 SSBP05455 408 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLCN1-201ENST00000343257 PCMTD1Q96MG8 357 aaPredicted RBP16.71■□□□□ 0.27
CLCN1-201ENST00000343257 RUFY1Q96T51 708 aa16.71■□□□□ 0.27
CLCN1-201ENST00000343257 SLC52A2Q9HAB3 445 aa16.71■□□□□ 0.27
CLCN1-201ENST00000343257 GDAQ9Y2T3 454 aa16.71■□□□□ 0.27
CLCN1-201ENST00000343257 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.26
CLCN1-201ENST00000343257 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.26
CLCN1-201ENST00000343257 TTF1Q15361 905 aaPredicted RBP16.71■□□□□ 0.26
CLCN1-201ENST00000343257 RILPL1Q5EBL4 403 aa16.71■□□□□ 0.26
CLCN1-201ENST00000343257 NBPF14Q5TI25 921 aa16.71■□□□□ 0.26
CLCN1-201ENST00000343257 KANK3Q6NY19 840 aa16.71■□□□□ 0.26
CLCN1-201ENST00000343257 SETQ01105 290 aaPredicted RBP16.7■□□□□ 0.26
CLCN1-201ENST00000343257 APBA1Q02410 837 aa16.7■□□□□ 0.26
CLCN1-201ENST00000343257 TSR1Q2NL82 804 aaKnown RBP16.7■□□□□ 0.26
CLCN1-201ENST00000343257 TRIM22Q8IYM9 498 aa16.7■□□□□ 0.26
CLCN1-201ENST00000343257 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
CLCN1-201ENST00000343257 TSEN2Q8NCE0 465 aaKnown RBP16.7■□□□□ 0.26
CLCN1-201ENST00000343257 GRIN2DO15399 1336 aa16.7■□□□□ 0.26
CLCN1-201ENST00000343257 ZPR1O75312 459 aa16.7■□□□□ 0.26
CLCN1-201ENST00000343257 ACTN3Q08043 901 aaPredicted RBP16.7■□□□□ 0.26
CLCN1-201ENST00000343257 CCDC57Q2TAC2 916 aa16.7■□□□□ 0.26
CLCN1-201ENST00000343257 GBP6Q6ZN66 633 aa16.7■□□□□ 0.26
CLCN1-201ENST00000343257 NELFBQ8WX92 580 aa16.7■□□□□ 0.26
CLCN1-201ENST00000343257 CCDC51Q96ER9 411 aa16.7■□□□□ 0.26
CLCN1-201ENST00000343257 CWC25Q9NXE8 425 aaPredicted RBP16.7■□□□□ 0.26
CLCN1-201ENST00000343257 KLK7P49862 253 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 MYO1AQ9UBC5 1043 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 SHOX2O60902 331 aaPredicted RBP16.69■□□□□ 0.26
CLCN1-201ENST00000343257 FMNL1O95466 1100 aaPredicted RBP16.69■□□□□ 0.26
CLCN1-201ENST00000343257 GCP02774 474 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 LRP10Q7Z4F1 713 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 STRN4Q9NRL3 753 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 LUC7L2Q9Y383 392 aaKnown RBP16.69■□□□□ 0.26
CLCN1-201ENST00000343257 CEP83Q9Y592 693 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 KRT14P02533 472 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 ZFYP08048 801 aaPredicted RBP16.69■□□□□ 0.26
CLCN1-201ENST00000343257 SCP2P22307 547 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 MCM3P25205 808 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 GSCP56915 257 aaPredicted RBP16.69■□□□□ 0.26
CLCN1-201ENST00000343257 GUCY1A3Q02108 690 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 RTN1Q16799 776 aa16.69■□□□□ 0.26
CLCN1-201ENST00000343257 H7C1W4 665 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 TTMPQ5BVD1 217 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 TCP11X2Q5H9J9 407 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 KRT26Q7Z3Y9 468 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 RAPGEF4Q8WZA2 1011 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 PLIN2Q99541 437 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 HAUS4Q9H6D7 363 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 AGPAT5Q9NUQ2 364 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 RGPD2P0DJD1 1756 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 ATP2C2O75185 946 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 MCAMP43121 646 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 SEC24CP53992 1094 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 OR8K1Q8NGG5 319 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 PLBD2Q8NHP8 589 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 SPATA20Q8TB22 786 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 TACC3Q9Y6A5 838 aa16.68■□□□□ 0.26
CLCN1-201ENST00000343257 ZNF532Q9HCE3 1301 aa16.67■□□□□ 0.26
CLCN1-201ENST00000343257 FRMD3A2A2Y4 597 aa16.67■□□□□ 0.26
CLCN1-201ENST00000343257 TRIM75PA6NK02 468 aa16.67■□□□□ 0.26
CLCN1-201ENST00000343257 PSMD14O00487 310 aa16.67■□□□□ 0.26
CLCN1-201ENST00000343257 USP8P40818 1118 aa16.67■□□□□ 0.26
CLCN1-201ENST00000343257 GIMAP7Q8NHV1 300 aa16.67■□□□□ 0.26
CLCN1-201ENST00000343257 CKAP4Q07065 602 aaKnown RBP16.67■□□□□ 0.26
CLCN1-201ENST00000343257 SF3A3Q12874 501 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLCN1-201ENST00000343257 PIH1D3Q9NQM4 214 aaKnown RBP16.67■□□□□ 0.26
CLCN1-201ENST00000343257 FAM184BQ9ULE4 1060 aa16.67■□□□□ 0.26
CLCN1-201ENST00000343257 ESYT3A0FGR9 886 aa16.67■□□□□ 0.26
CLCN1-201ENST00000343257 PAK1Q13153 545 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms