RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 ZFPM1Q8IX07 1006 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 MKNK2Q9HBH9 465 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 TAOK2Q9UL54 1235 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 NAP1L2Q9ULW6 460 aaPredicted RBP24.37■■□□□ 1.49
DUSP28-201ENST00000343217 CCDC69A6NI79 296 aa24.36■■□□□ 1.49
DUSP28-201ENST00000343217 PPIL2Q13356 520 aa24.36■■□□□ 1.49
DUSP28-201ENST00000343217 DHX36Q9H2U1 1008 aaKnown RBP24.36■■□□□ 1.49
DUSP28-201ENST00000343217 DDX4Q9NQI0 724 aaKnown RBP24.36■■□□□ 1.49
DUSP28-201ENST00000343217 BRPF3Q9ULD4 1205 aa24.36■■□□□ 1.49
DUSP28-201ENST00000343217 ATRNL1Q5VV63 1379 aa24.35■■□□□ 1.49
DUSP28-201ENST00000343217 GOLGA8BA8MQT2 603 aa24.35■■□□□ 1.49
DUSP28-201ENST00000343217 ENTPD3O75355 529 aa24.35■■□□□ 1.49
DUSP28-201ENST00000343217 HLA-DOAP06340 250 aa24.35■■□□□ 1.49
DUSP28-201ENST00000343217 INPP5BP32019 993 aa24.35■■□□□ 1.49
DUSP28-201ENST00000343217 RCAN1P53805 252 aa24.35■■□□□ 1.49
DUSP28-201ENST00000343217 CCDC178Q5BJE1 867 aa24.35■■□□□ 1.49
DUSP28-201ENST00000343217 SYNE3Q6ZMZ3 975 aa24.35■■□□□ 1.49
DUSP28-201ENST00000343217 NFXL1Q6ZNB6 911 aa24.35■■□□□ 1.49
DUSP28-201ENST00000343217 ZSCAN10Q96SZ4 725 aaPredicted RBP24.35■■□□□ 1.49
DUSP28-201ENST00000343217 TNKSO95271 1327 aa24.34■■□□□ 1.49
DUSP28-201ENST00000343217 TSPY2A6NKD2 308 aa24.34■■□□□ 1.49
DUSP28-201ENST00000343217 IRF6O14896 467 aa24.34■■□□□ 1.49
DUSP28-201ENST00000343217 GJB2P29033 226 aa24.34■■□□□ 1.49
DUSP28-201ENST00000343217 EVX2Q03828 476 aa24.34■■□□□ 1.49
DUSP28-201ENST00000343217 SLC4A8Q2Y0W8 1093 aa24.34■■□□□ 1.49
DUSP28-201ENST00000343217 APOA5Q6Q788 366 aa24.34■■□□□ 1.49
DUSP28-201ENST00000343217 ZNF444Q8N0Y2 327 aaPredicted RBP24.34■■□□□ 1.49
DUSP28-201ENST00000343217 DYNLL2Q96FJ2 89 aa24.34■■□□□ 1.49
DUSP28-201ENST00000343217 HMGN5P82970 282 aaKnown RBP24.33■■□□□ 1.49
DUSP28-201ENST00000343217 PPATQ06203 517 aa24.33■■□□□ 1.49
DUSP28-201ENST00000343217 FAM43AQ8N2R8 423 aa24.33■■□□□ 1.49
DUSP28-201ENST00000343217 SLC12A7Q9Y666 1083 aa24.33■■□□□ 1.49
DUSP28-201ENST00000343217 CETPP11597 493 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 PDCP20941 246 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 CDK8P49336 464 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 SNAPC2Q13487 334 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 SEC23AQ15436 765 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 NOL9Q5SY16 702 aaKnown RBP24.33■■□□□ 1.48
DUSP28-201ENST00000343217 OTOP1Q7RTM1 612 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 ERO1AQ96HE7 468 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 ZKSCAN3Q9BRR0 538 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 EHD4Q9H223 541 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 SWAP70Q9UH65 585 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 KIF3AQ9Y496 699 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 HTTP42858 3142 aa24.33■■□□□ 1.48
DUSP28-201ENST00000343217 COL2A1P02458 1487 aaPredicted RBP24.32■■□□□ 1.48
DUSP28-201ENST00000343217 ZBTB43O43298 467 aa24.32■■□□□ 1.48
DUSP28-201ENST00000343217 SOX10P56693 466 aa24.32■■□□□ 1.48
DUSP28-201ENST00000343217 CCT2P78371 535 aaKnown RBP24.32■■□□□ 1.48
DUSP28-201ENST00000343217 TAF1CQ15572 869 aaPredicted RBP24.32■■□□□ 1.48
DUSP28-201ENST00000343217 SH3BP5LQ7L8J4 393 aa24.32■■□□□ 1.48
DUSP28-201ENST00000343217 ZCCHC17Q9NP64 241 aaKnown RBP24.32■■□□□ 1.48
DUSP28-201ENST00000343217 SERPINB13Q9UIV8 391 aa24.32■■□□□ 1.48
DUSP28-201ENST00000343217 NID2Q14112 1375 aa24.31■■□□□ 1.48
DUSP28-201ENST00000343217 METAP2P50579 478 aaKnown RBP eCLIP24.31■■□□□ 1.48
DUSP28-201ENST00000343217 SP3Q02447 781 aa24.31■■□□□ 1.48
DUSP28-201ENST00000343217 MAP3K10Q02779 954 aa24.31■■□□□ 1.48
DUSP28-201ENST00000343217 GABPAQ06546 454 aa24.31■■□□□ 1.48
DUSP28-201ENST00000343217 ENAHQ8N8S7 591 aaPredicted RBP24.31■■□□□ 1.48
DUSP28-201ENST00000343217 SMARCC2Q8TAQ2 1214 aa24.31■■□□□ 1.48
DUSP28-201ENST00000343217 ZFYVE28Q9HCC9 887 aa24.31■■□□□ 1.48
DUSP28-201ENST00000343217 TCP11L1Q9NUJ3 509 aa24.31■■□□□ 1.48
DUSP28-201ENST00000343217 TRIM17Q9Y577 477 aa24.31■■□□□ 1.48
DUSP28-201ENST00000343217 TSPY3P0CV98 308 aa24.3■■□□□ 1.48
DUSP28-201ENST00000343217 TSPY8P0CW00 308 aa24.3■■□□□ 1.48
DUSP28-201ENST00000343217 RASA1P20936 1047 aa24.3■■□□□ 1.48
DUSP28-201ENST00000343217 TFAP4Q01664 338 aa24.3■■□□□ 1.48
DUSP28-201ENST00000343217 IFIT1BQ5T764 474 aaKnown RBP24.3■■□□□ 1.48
DUSP28-201ENST00000343217 CD99L2Q8TCZ2 262 aa24.3■■□□□ 1.48
DUSP28-201ENST00000343217 PHF20L1A8MW92 1017 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 BTBD19C9JJ37 291 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 PPP2R5BQ15173 497 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 FAM47AQ5JRC9 791 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 CPLX2Q6PUV4 134 aaKnown RBP24.29■■□□□ 1.48
DUSP28-201ENST00000343217 NSUN7Q8NE18 718 aaKnown RBP24.29■■□□□ 1.48
DUSP28-201ENST00000343217 SENP2Q9HC62 589 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 KCNH4Q9UQ05 1017 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 DDTLA6NHG4 134 aaPredicted RBP24.29■■□□□ 1.48
DUSP28-201ENST00000343217 CPLX1O14810 134 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 BRD1O95696 1058 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 CAP1Q01518 475 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 DGKHQ86XP1 1220 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 SLC44A5Q8NCS7 719 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 NCOA5Q9HCD5 579 aaKnown RBP24.29■■□□□ 1.48
DUSP28-201ENST00000343217 PI4KBQ9UBF8 816 aa24.29■■□□□ 1.48
DUSP28-201ENST00000343217 MYH8P13535 1937 aa24.28■■□□□ 1.48
DUSP28-201ENST00000343217 TNRC18O15417 2968 aaPredicted RBP24.28■■□□□ 1.48
DUSP28-201ENST00000343217 GOLGA8AA7E2F4 631 aa24.28■■□□□ 1.48
DUSP28-201ENST00000343217 CDKL5O76039 1030 aa24.28■■□□□ 1.48
DUSP28-201ENST00000343217 MICU3Q86XE3 530 aa24.28■■□□□ 1.48
DUSP28-201ENST00000343217 ZNF654Q8IZM8 581 aa24.28■■□□□ 1.48
DUSP28-201ENST00000343217 TNPO1Q92973 898 aaKnown RBP24.28■■□□□ 1.48
DUSP28-201ENST00000343217 CCDC196A0A1B0GTZ2 297 aa24.27■■□□□ 1.48
DUSP28-201ENST00000343217 STX6O43752 255 aa24.27■■□□□ 1.48
DUSP28-201ENST00000343217 SYT1P21579 422 aa24.27■■□□□ 1.48
DUSP28-201ENST00000343217 CATIPQ7Z7H3 387 aa24.27■■□□□ 1.48
DUSP28-201ENST00000343217 NEDD1Q8NHV4 660 aa24.27■■□□□ 1.48
DUSP28-201ENST00000343217 ANKS1AQ92625 1134 aa24.27■■□□□ 1.48
DUSP28-201ENST00000343217 PTPDC1A2A3K4 754 aa24.26■■□□□ 1.47
DUSP28-201ENST00000343217 CTDNEP1O95476 244 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms