RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 BCL11BQ9C0K0 894 aaPredicted RBP16.59■□□□□ 0.25
TDP2-201ENST00000341060 WNT7AO00755 349 aa16.58■□□□□ 0.25
TDP2-201ENST00000341060 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.25
TDP2-201ENST00000341060 TC2NQ8N9U0 490 aa16.58■□□□□ 0.25
TDP2-201ENST00000341060 CTCFLQ8NI51 663 aaPredicted RBP16.58■□□□□ 0.25
TDP2-201ENST00000341060 BAG1Q99933 345 aaPredicted RBP16.58■□□□□ 0.25
TDP2-201ENST00000341060 SAMSN1Q9NSI8 373 aaKnown RBP16.58■□□□□ 0.25
TDP2-201ENST00000341060 ATP8A2Q9NTI2 1148 aa16.58■□□□□ 0.25
TDP2-201ENST00000341060 ARPP21Q9UBL0 812 aaPredicted RBP16.58■□□□□ 0.25
TDP2-201ENST00000341060 MYH1P12882 1939 aa16.58■□□□□ 0.24
TDP2-201ENST00000341060 A0A1B0GTH6 734 aa16.58■□□□□ 0.24
TDP2-201ENST00000341060 RPS8P62241 208 aaKnown RBP16.58■□□□□ 0.24
TDP2-201ENST00000341060 ATP2C1P98194 919 aaPredicted RBP16.58■□□□□ 0.24
TDP2-201ENST00000341060 TTC38Q5R3I4 469 aa16.58■□□□□ 0.24
TDP2-201ENST00000341060 ZNF772Q68DY9 489 aaPredicted RBP16.58■□□□□ 0.24
TDP2-201ENST00000341060 BICDL1Q6ZP65 573 aa16.58■□□□□ 0.24
TDP2-201ENST00000341060 SRBD1Q8N5C6 995 aaKnown RBP16.58■□□□□ 0.24
TDP2-201ENST00000341060 PAGE5Q96GU1 130 aa16.58■□□□□ 0.24
TDP2-201ENST00000341060 GSDMAQ96QA5 445 aa16.58■□□□□ 0.24
TDP2-201ENST00000341060 NYXQ9GZU5 481 aa16.58■□□□□ 0.24
TDP2-201ENST00000341060 PRDM10Q9NQV6 1147 aa16.58■□□□□ 0.24
TDP2-201ENST00000341060 DNAI1Q9UI46 699 aa16.58■□□□□ 0.24
TDP2-201ENST00000341060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.58■□□□□ 0.243e-6■■□□□ 14.2
TDP2-201ENST00000341060 BTAF1O14981 1849 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 DPYDQ12882 1025 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 NR1I3Q14994 352 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 FBXO38Q6PIJ6 1188 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 PPP2R2CQ9Y2T4 447 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 NAV1Q8NEY1 1877 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 CDK5RAP2Q96SN8 1893 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 NMT2O60551 498 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 HIBADHP31937 336 aaKnown RBP16.57■□□□□ 0.24
TDP2-201ENST00000341060 AFMP43652 599 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 EVX2Q03828 476 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 CUL4BQ13620 913 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 FBXO41Q8TF61 875 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 ANKRD2Q9GZV1 360 aa16.57■□□□□ 0.24
TDP2-201ENST00000341060 SYNRGQ9UMZ2 1314 aa16.56■□□□□ 0.24
TDP2-201ENST00000341060 VWA3AA6NCI4 1184 aa16.56■□□□□ 0.24
TDP2-201ENST00000341060 GOLGA6L9A6NEM1 432 aa16.56■□□□□ 0.24
TDP2-201ENST00000341060 SCG2P13521 617 aa16.56■□□□□ 0.24
TDP2-201ENST00000341060 PRDX5P30044 214 aa16.56■□□□□ 0.24
TDP2-201ENST00000341060 TRAPPC10P48553 1259 aa16.56■□□□□ 0.24
TDP2-201ENST00000341060 PTGDRQ13258 359 aa16.56■□□□□ 0.24
TDP2-201ENST00000341060 NOM1Q5C9Z4 860 aaKnown RBP16.56■□□□□ 0.24
TDP2-201ENST00000341060 SPATA1Q5VX52 437 aa16.56■□□□□ 0.24
TDP2-201ENST00000341060 NLRP3Q96P20 1036 aa16.56■□□□□ 0.24
TDP2-201ENST00000341060 TAF1LQ8IZX4 1826 aa16.56■□□□□ 0.24
TDP2-201ENST00000341060 FANCGO15287 622 aa16.55■□□□□ 0.24
TDP2-201ENST00000341060 DMTNQ08495 405 aa16.55■□□□□ 0.24
TDP2-201ENST00000341060 ZNF174Q15697 407 aa16.55■□□□□ 0.24
TDP2-201ENST00000341060 APTXQ7Z2E3 356 aaKnown RBP16.55■□□□□ 0.24
TDP2-201ENST00000341060 NARFQ9UHQ1 456 aa16.55■□□□□ 0.24
TDP2-201ENST00000341060 TNRC6CQ9HCJ0 1690 aaKnown RBP16.55■□□□□ 0.24
TDP2-201ENST00000341060 ZBTB22O15209 634 aa16.55■□□□□ 0.24
TDP2-201ENST00000341060 CD44P16070 742 aaKnown RBP16.55■□□□□ 0.24
TDP2-201ENST00000341060 ADKP55263 362 aaKnown RBP16.55■□□□□ 0.24
TDP2-201ENST00000341060 PFKFB3Q16875 520 aaPredicted RBP16.55■□□□□ 0.24
TDP2-201ENST00000341060 ERCC6LQ2NKX8 1250 aa16.55■□□□□ 0.24
TDP2-201ENST00000341060 FAM47AQ5JRC9 791 aa16.55■□□□□ 0.24
TDP2-201ENST00000341060 UTP14CQ5TAP6 766 aaKnown RBP16.55■□□□□ 0.24
TDP2-201ENST00000341060 SRRTQ9BXP5 876 aaKnown RBP16.55■□□□□ 0.24
TDP2-201ENST00000341060 E2F4Q16254 413 aa16.54■□□□□ 0.24
TDP2-201ENST00000341060 CDKAL1Q5VV42 579 aa16.54■□□□□ 0.24
TDP2-201ENST00000341060 KRT27Q7Z3Y8 459 aa16.54■□□□□ 0.24
TDP2-201ENST00000341060 LRRN4CLQ8ND94 238 aa16.54■□□□□ 0.24
TDP2-201ENST00000341060 SETDB2Q96T68 719 aa16.54■□□□□ 0.24
TDP2-201ENST00000341060 TFCP2L1Q9NZI6 479 aa16.54■□□□□ 0.24
TDP2-201ENST00000341060 TSPY2A6NKD2 308 aa16.54■□□□□ 0.24
TDP2-201ENST00000341060 CASP1P29466 404 aa16.54■□□□□ 0.24
TDP2-201ENST00000341060 RCSD1Q6JBY9 416 aa16.54■□□□□ 0.24
TDP2-201ENST00000341060 NBPF5PQ86XG9 351 aaPredicted RBP16.54■□□□□ 0.24
TDP2-201ENST00000341060 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
TDP2-201ENST00000341060 CYP2D6P10635 497 aa16.53■□□□□ 0.24
TDP2-201ENST00000341060 H2AFXP16104 143 aaPredicted RBP16.53■□□□□ 0.24
TDP2-201ENST00000341060 KIF5BP33176 963 aa16.53■□□□□ 0.24
TDP2-201ENST00000341060 NT5C2P49902 561 aa16.53■□□□□ 0.24
TDP2-201ENST00000341060 NLRP5P59047 1200 aa16.53■□□□□ 0.24
TDP2-201ENST00000341060 PIK3AP1Q6ZUJ8 805 aa16.53■□□□□ 0.24
TDP2-201ENST00000341060 CTAGE1Q96RT6 745 aa16.53■□□□□ 0.24
TDP2-201ENST00000341060 PYM1Q9BRP8 204 aaKnown RBP16.53■□□□□ 0.24
TDP2-201ENST00000341060 GTPBP4Q9BZE4 634 aaKnown RBP16.53■□□□□ 0.24
TDP2-201ENST00000341060 XDHP47989 1333 aa16.53■□□□□ 0.24
TDP2-201ENST00000341060 IRS2Q9Y4H2 1338 aa16.53■□□□□ 0.24
TDP2-201ENST00000341060 PPP1R3GB7ZBB8 358 aa16.52■□□□□ 0.24
TDP2-201ENST00000341060 KLHL10Q6JEL2 608 aa16.52■□□□□ 0.24
TDP2-201ENST00000341060 TOGARAM2Q6ZUX3 1019 aa16.52■□□□□ 0.24
TDP2-201ENST00000341060 IQUBQ8NA54 791 aa16.52■□□□□ 0.24
TDP2-201ENST00000341060 PANX2Q96RD6 677 aa16.52■□□□□ 0.24
TDP2-201ENST00000341060 ADD3Q9UEY8 706 aaKnown RBP16.52■□□□□ 0.24
TDP2-201ENST00000341060 PRDM4Q9UKN5 801 aa16.52■□□□□ 0.24
TDP2-201ENST00000341060 RPS6KA4O75676 772 aa16.52■□□□□ 0.23
TDP2-201ENST00000341060 PBX1P40424 430 aa16.52■□□□□ 0.23
TDP2-201ENST00000341060 RC3H1Q5TC82 1133 aaKnown RBP16.52■□□□□ 0.23
TDP2-201ENST00000341060 NHSQ6T4R5 1651 aa16.51■□□□□ 0.23
TDP2-201ENST00000341060 AKR1B15C9JRZ8 316 aaPredicted RBP16.51■□□□□ 0.23
TDP2-201ENST00000341060 TEX33O43247 280 aa16.51■□□□□ 0.23
TDP2-201ENST00000341060 CALML3P27482 149 aa16.51■□□□□ 0.23
TDP2-201ENST00000341060 STX17P56962 302 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms