RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 P2RX7Q99572 595 aaKnown RBP18.06■□□□□ 0.48
UBE3B-201ENST00000340074 RNF41Q9H4P4 317 aaPredicted RBP18.06■□□□□ 0.48
UBE3B-201ENST00000340074 RPAP3Q9H6T3 665 aaPredicted RBP18.06■□□□□ 0.48
UBE3B-201ENST00000340074 VCPKMTQ9H867 229 aa18.06■□□□□ 0.48
UBE3B-201ENST00000340074 NEDD4P46934 1319 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 HTTP42858 3142 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 USP17L15C9J2P7 530 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 USP17L13C9JLJ4 530 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 USP17L11C9JVI0 530 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 USP17L18D6R9N7 530 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 USP17L22D6RA61 530 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 USP17L17D6RBQ6 530 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 USP17L19D6RCP7 530 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 USP17L20D6RJB6 530 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 NMT2O60551 498 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 TTLL1O95922 423 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 USP17L24Q0WX57 530 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 CATSPERGQ6ZRH7 1159 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 NKX2-3Q8TAU0 364 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 LPAR1Q92633 364 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 GOPCQ9HD26 462 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 IL17RBQ9NRM6 502 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 CLIP2Q9UDT6 1046 aa18.05■□□□□ 0.48
UBE3B-201ENST00000340074 RAD21O60216 631 aa18.04■□□□□ 0.48
UBE3B-201ENST00000340074 ECM2O94769 699 aaPredicted RBP18.04■□□□□ 0.48
UBE3B-201ENST00000340074 LACTBP83111 547 aaPredicted RBP18.04■□□□□ 0.48
UBE3B-201ENST00000340074 CASC1Q6TDU7 716 aa18.04■□□□□ 0.48
UBE3B-201ENST00000340074 KIAA1211Q6ZU35 1233 aa18.04■□□□□ 0.48
UBE3B-201ENST00000340074 ANKRD13CQ8N6S4 541 aa18.04■□□□□ 0.48
UBE3B-201ENST00000340074 MAP4K1Q92918 833 aa18.04■□□□□ 0.48
UBE3B-201ENST00000340074 U3KPZ7 1027 aaPredicted RBP18.04■□□□□ 0.48
UBE3B-201ENST00000340074 GCLCP48506 637 aaPredicted RBP18.03■□□□□ 0.48
UBE3B-201ENST00000340074 HERVK_113P62684 666 aa18.03■□□□□ 0.48
UBE3B-201ENST00000340074 CTU1Q7Z7A3 348 aaKnown RBP18.03■□□□□ 0.48
UBE3B-201ENST00000340074 TNS4Q8IZW8 715 aa18.03■□□□□ 0.48
UBE3B-201ENST00000340074 MKL1Q969V6 931 aa18.03■□□□□ 0.48
UBE3B-201ENST00000340074 TANGO6Q9C0B7 1094 aa18.03■□□□□ 0.48
UBE3B-201ENST00000340074 ARHGAP39Q9C0H5 1083 aa18.03■□□□□ 0.48
UBE3B-201ENST00000340074 LSG1Q9H089 658 aaKnown RBP18.03■□□□□ 0.48
UBE3B-201ENST00000340074 A0A0G2JMZ2 1700 aa18.02■□□□□ 0.48
UBE3B-201ENST00000340074 WDR46O15213 610 aaKnown RBP18.02■□□□□ 0.48
UBE3B-201ENST00000340074 CYP21A2P08686 494 aa18.02■□□□□ 0.48
UBE3B-201ENST00000340074 LRRC47Q8N1G4 583 aaKnown RBP18.02■□□□□ 0.48
UBE3B-201ENST00000340074 STX8Q9UNK0 236 aa18.02■□□□□ 0.48
UBE3B-201ENST00000340074 TRIM17Q9Y577 477 aa18.02■□□□□ 0.48
UBE3B-201ENST00000340074 RBM8AQ9Y5S9 174 aaKnown RBP18.02■□□□□ 0.48
UBE3B-201ENST00000340074 B4E1Z4 1266 aa18.01■□□□□ 0.47
UBE3B-201ENST00000340074 F5H6K3 240 aa18.01■□□□□ 0.47
UBE3B-201ENST00000340074 CTGFP29279 349 aa18.01■□□□□ 0.47
UBE3B-201ENST00000340074 KLRC3Q07444 240 aa18.01■□□□□ 0.47
UBE3B-201ENST00000340074 KIF22Q14807 665 aa18.01■□□□□ 0.47
UBE3B-201ENST00000340074 FAM110CQ1W6H9 321 aa18.01■□□□□ 0.47
UBE3B-201ENST00000340074 ESR2Q92731 530 aa18.01■□□□□ 0.47
UBE3B-201ENST00000340074 MCOLN1Q9GZU1 580 aa18.01■□□□□ 0.47
UBE3B-201ENST00000340074 ANO2Q9NQ90 1003 aa18.01■□□□□ 0.47
UBE3B-201ENST00000340074 TCP11L1Q9NUJ3 509 aa18.01■□□□□ 0.47
UBE3B-201ENST00000340074 PEX10O60683 326 aa18■□□□□ 0.47
UBE3B-201ENST00000340074 NDUFB10O96000 172 aa18■□□□□ 0.47
UBE3B-201ENST00000340074 PPP4R3BQ5MIZ7 849 aa18■□□□□ 0.47
UBE3B-201ENST00000340074 POTEEQ6S8J3 1075 aa18■□□□□ 0.47
UBE3B-201ENST00000340074 OTOP1Q7RTM1 612 aa18■□□□□ 0.47
UBE3B-201ENST00000340074 NUP88Q99567 741 aaPredicted RBP18■□□□□ 0.47
UBE3B-201ENST00000340074 EFCC1Q9HA90 598 aa18■□□□□ 0.47
UBE3B-201ENST00000340074 TXNRD2Q9NNW7 524 aa18■□□□□ 0.47
UBE3B-201ENST00000340074 SYNPO2Q9UMS6 1093 aa18■□□□□ 0.47
UBE3B-201ENST00000340074 KDM4AO75164 1064 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 PSMC4P43686 418 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 NOVP48745 357 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 COG2Q14746 738 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 FAM83BQ5T0W9 1011 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 GMCL1P1Q8NEA9 526 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 ZKSCAN3Q9BRR0 538 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 PAGR1Q9BTK6 254 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 KRT23Q9C075 422 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 CNNM2Q9H8M5 875 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 ZSWIM5Q9P217 1185 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 RBPJLQ9UBG7 517 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 TAF6LQ9Y6J9 622 aa17.99■□□□□ 0.47
UBE3B-201ENST00000340074 SPDYE16A6NNV3 312 aaPredicted RBP17.98■□□□□ 0.47
UBE3B-201ENST00000340074 FLOT1O75955 427 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 ARHGEF6Q15052 776 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 GTF3C2Q8WUA4 911 aaPredicted RBP17.98■□□□□ 0.47
UBE3B-201ENST00000340074 TRIM47Q96LD4 638 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 HOXC10Q9NYD6 342 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 MORF4L1Q9UBU8 362 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 PLXNB2O15031 1838 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 FMNL1O95466 1100 aaPredicted RBP17.98■□□□□ 0.47
UBE3B-201ENST00000340074 NT5C2P49902 561 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 PKN2Q16513 984 aaKnown RBP17.98■□□□□ 0.47
UBE3B-201ENST00000340074 SLFN13Q68D06 897 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 SAMD1Q6SPF0 538 aaPredicted RBP17.98■□□□□ 0.47
UBE3B-201ENST00000340074 LBX2Q6XYB7 198 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 GPRC5AQ8NFJ5 357 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 FBXO28Q9NVF7 368 aa17.98■□□□□ 0.47
UBE3B-201ENST00000340074 E7EWF7 191 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 CNMDO75829 334 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 DSG3P32926 999 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 FCGRTP55899 365 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 ERVK-9P63128 1117 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 ERVK-24P63145 666 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms