RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 RXRAP19793 462 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 PDIA3P30101 505 aaKnown RBP17.24■□□□□ 0.35
CSRP1-201ENST00000340006 ECE1P42892 770 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 CCT2P78371 535 aaKnown RBP17.24■□□□□ 0.35
CSRP1-201ENST00000340006 SPP2Q13103 211 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 ZYXQ15942 572 aaKnown RBP17.24■□□□□ 0.35
CSRP1-201ENST00000340006 ME3Q16798 604 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 NOL9Q5SY16 702 aaKnown RBP17.24■□□□□ 0.35
CSRP1-201ENST00000340006 APOA5Q6Q788 366 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 MICU3Q86XE3 530 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 ACER1Q8TDN7 264 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 GOLGA8BA8MQT2 603 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 LDLRAD1Q5T700 205 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 ZNF280CQ8ND82 737 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 TMX3Q96JJ7 454 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 SH2D4AQ9H788 454 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 ISY1Q9ULR0 285 aaKnown RBP17.24■□□□□ 0.35
CSRP1-201ENST00000340006 SNCAIPQ9Y6H5 919 aa17.24■□□□□ 0.35
CSRP1-201ENST00000340006 GREB1LQ9C091 1923 aaPredicted RBP17.23■□□□□ 0.35
CSRP1-201ENST00000340006 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
CSRP1-201ENST00000340006 TRIM75PA6NK02 468 aa17.23■□□□□ 0.35
CSRP1-201ENST00000340006 CALM1P0DP23 149 aa17.23■□□□□ 0.35
CSRP1-201ENST00000340006 CALM2P0DP24 149 aa17.23■□□□□ 0.35
CSRP1-201ENST00000340006 CALM3P0DP25 149 aa17.23■□□□□ 0.35
CSRP1-201ENST00000340006 NOVP48745 357 aa17.23■□□□□ 0.35
CSRP1-201ENST00000340006 METAP2P50579 478 aaKnown RBP eCLIP17.23■□□□□ 0.35
CSRP1-201ENST00000340006 EVCP57679 992 aa17.23■□□□□ 0.35
CSRP1-201ENST00000340006 FSTL1Q12841 308 aa17.23■□□□□ 0.35
CSRP1-201ENST00000340006 NECAB1Q8N987 351 aa17.23■□□□□ 0.35
CSRP1-201ENST00000340006 USP17L10C9JJH3 530 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 F5H6K3 240 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 HSP90AA1P07900 732 aaKnown RBP17.22■□□□□ 0.35
CSRP1-201ENST00000340006 HUNKP57058 714 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 KLRC3Q07444 240 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 ERO1BQ86YB8 467 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 SH2B1Q9NRF2 756 aaPredicted RBP17.22■□□□□ 0.35
CSRP1-201ENST00000340006 TMX2Q9Y320 296 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 PASKQ96RG2 1323 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 UNCXA6NJT0 531 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 GOLGA8AA7E2F4 631 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
CSRP1-201ENST00000340006 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
CSRP1-201ENST00000340006 LARGE1O95461 756 aa17.21■□□□□ 0.35
CSRP1-201ENST00000340006 PPATQ06203 517 aa17.21■□□□□ 0.35
CSRP1-201ENST00000340006 TROAPQ12815 778 aa17.21■□□□□ 0.35
CSRP1-201ENST00000340006 SLFN13Q68D06 897 aa17.21■□□□□ 0.35
CSRP1-201ENST00000340006 SPICE1Q8N0Z3 855 aa17.21■□□□□ 0.35
CSRP1-201ENST00000340006 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
CSRP1-201ENST00000340006 OPTNQ96CV9 577 aa17.21■□□□□ 0.35
CSRP1-201ENST00000340006 WDR18Q9BV38 432 aa17.21■□□□□ 0.35
CSRP1-201ENST00000340006 AFG3L2Q9Y4W6 797 aa17.21■□□□□ 0.35
CSRP1-201ENST00000340006 DDAH1O94760 285 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 MTMR2Q13614 643 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 CCDC83Q8IWF9 413 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 SPRYD3Q8NCJ5 442 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 NCOA5Q9HCD5 579 aaKnown RBP17.2■□□□□ 0.34
CSRP1-201ENST00000340006 ABT1Q9ULW3 272 aaKnown RBP17.2■□□□□ 0.34
CSRP1-201ENST00000340006 PAPPA2Q9BXP8 1791 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 OTOFQ9HC10 1997 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 CCDC196A0A1B0GTZ2 297 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 TMEM88BA6NKF7 163 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 CPLX1O14810 134 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 DHX16O60231 1041 aaKnown RBP17.2■□□□□ 0.34
CSRP1-201ENST00000340006 PFKFB2O60825 505 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 PARP1P09874 1014 aaKnown RBP17.2■□□□□ 0.34
CSRP1-201ENST00000340006 KIF5BP33176 963 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 ADD1P35611 737 aaKnown RBP17.2■□□□□ 0.34
CSRP1-201ENST00000340006 SLC1A4P43007 532 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 USP14P54578 494 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 BACE1P56817 501 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 RTN1Q16799 776 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 USP17L2Q6R6M4 530 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 CCDC82Q8N4S0 544 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 HPS5Q9UPZ3 1129 aa17.2■□□□□ 0.34
CSRP1-201ENST00000340006 C19orf81C9J6K1 198 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 SCRN1Q12765 414 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 CCDC96Q2M329 555 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 GMCL1P1Q8NEA9 526 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 KIAA1683Q9H0B3 1180 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 SPDYE5A6NIY4 337 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 IRF6O14896 467 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 ZNF157P51786 506 aaPredicted RBP17.19■□□□□ 0.34
CSRP1-201ENST00000340006 PPP2R5BQ15173 497 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 SAPCD2Q86UD0 394 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 VCPKMTQ9H867 229 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 TMOD4Q9NZQ9 345 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 SYNPO2Q9UMS6 1093 aa17.19■□□□□ 0.34
CSRP1-201ENST00000340006 FRMPD2Q68DX3 1309 aaPredicted RBP17.18■□□□□ 0.34
CSRP1-201ENST00000340006 NDUFB10O96000 172 aa17.18■□□□□ 0.34
CSRP1-201ENST00000340006 PDHBP11177 359 aa17.18■□□□□ 0.34
CSRP1-201ENST00000340006 HMGCS2P54868 508 aa17.18■□□□□ 0.34
CSRP1-201ENST00000340006 MKRN3Q13064 507 aaKnown RBP17.18■□□□□ 0.34
CSRP1-201ENST00000340006 CPLX2Q6PUV4 134 aaKnown RBP17.18■□□□□ 0.34
CSRP1-201ENST00000340006 KCTD1Q719H9 257 aa17.18■□□□□ 0.34
CSRP1-201ENST00000340006 GTF3C6Q969F1 213 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms