RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 ZNF530Q6P9A1 599 aaPredicted RBP10.57□□□□□ -0.72
NECAP1-201ENST00000339754 ATG9AQ7Z3C6 839 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 NOSTRINQ8IVI9 506 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 HDAC7Q8WUI4 952 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 LRRC59Q96AG4 307 aaKnown RBP10.57□□□□□ -0.72
NECAP1-201ENST00000339754 NUP88Q99567 741 aaPredicted RBP10.57□□□□□ -0.72
NECAP1-201ENST00000339754 VEZTQ9HBM0 779 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 DENND2AQ9ULE3 1009 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 TMEM94Q12767 1356 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 BTBD18B2RXH4 712 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 PPP1R12AO14974 1030 aaPredicted RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 ZEB2O60315 1214 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 RANBP6O60518 1105 aaKnown RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 CDKL5O76039 1030 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 CASP1P29466 404 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 RDXP35241 583 aaKnown RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 DPYDQ12882 1025 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 SH3RF1Q7Z6J0 888 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 SMYD4Q8IYR2 804 aaPredicted RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 TSEN2Q8NCE0 465 aaKnown RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 N4BP2L2Q92802 583 aaPredicted RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 VCPKMTQ9H867 229 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 FAM217BQ9NTX9 383 aaPredicted RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 SRPRBQ9Y5M8 271 aaKnown RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 UBN2Q6ZU65 1347 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 ECM29Q5VYK3 1845 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 N4BP3O15049 544 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 C2orf54Q08AI8 447 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 EZH2Q15910 746 aaKnown RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 CCDC122Q5T0U0 273 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 ALS2CLQ60I27 953 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 ZNF662Q6ZS27 426 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 RALYLQ86SE5 291 aaKnown RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 MMGT1Q8N4V1 131 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 VPS16Q9H269 839 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 SENP2Q9HC62 589 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 DMGDHQ9UI17 866 aaKnown RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 ODF2LQ9ULJ1 636 aa10.56□□□□□ -0.72
NECAP1-201ENST00000339754 ANGEL1Q9UNK9 670 aaKnown RBP10.56□□□□□ -0.72
NECAP1-201ENST00000339754 A0A087X0B3 334 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 COBLO75128 1261 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 IFIT1P09914 478 aaKnown RBP10.55□□□□□ -0.72
NECAP1-201ENST00000339754 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
NECAP1-201ENST00000339754 MRPL12P52815 198 aaKnown RBP10.55□□□□□ -0.72
NECAP1-201ENST00000339754 COPB1P53618 953 aaKnown RBP10.55□□□□□ -0.72
NECAP1-201ENST00000339754 TRIM29Q14134 588 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 TRIM14Q14142 442 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 CCDC40Q4G0X9 1142 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 EMC10Q5UCC4 262 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 NAA35Q5VZE5 725 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 APOA5Q6Q788 366 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 CYB5R4Q7L1T6 521 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 COPS6Q7L5N1 327 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 XAGE3Q8WTP9 111 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 LRRC1Q9BTT6 524 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 EPN3Q9H201 632 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 GPR108Q9NPR9 543 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 PCDHB6Q9Y5E3 794 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 LSP1P33241 339 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 NF2P35240 595 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 IARSP41252 1262 aaKnown RBP10.55□□□□□ -0.72
NECAP1-201ENST00000339754 AFMP43652 599 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 PLCB4Q15147 1175 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 PPP2R5AQ15172 486 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 WDR59Q6PJI9 974 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 IQCA1Q86XH1 822 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 CEP120Q8N960 986 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 PAGE5Q96GU1 130 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 CSRNP2Q9H175 543 aa10.55□□□□□ -0.72
NECAP1-201ENST00000339754 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
NECAP1-201ENST00000339754 RCCD1A6NED2 376 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 TMCO5BA8MYB1 307 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 ZNF213O14771 459 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 MYL6BP14649 208 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 LRCH2Q5VUJ6 765 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 C6orf89Q6UWU4 347 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 MICALCLQ6ZW33 695 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 FAM228AQ86W67 206 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 CREG2Q8IUH2 290 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 CCDC13Q8IYE1 715 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 SH2D3CQ8N5H7 860 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 OR8K1Q8NGG5 319 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 ZNF473Q8WTR7 871 aaKnown RBP10.54□□□□□ -0.72
NECAP1-201ENST00000339754 TBC1D22AQ8WUA7 517 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 AIDAQ96BJ3 306 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 RNPC3Q96LT9 517 aaKnown RBP10.54□□□□□ -0.72
NECAP1-201ENST00000339754 LACRTQ9GZZ8 138 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 SLC40A1Q9NP59 571 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 BCL9LQ86UU0 1499 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 TTC26A0AVF1 554 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 CAPN15O75808 1086 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 PAX7P23759 505 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 ATP1A2P50993 1020 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 CASP7P55210 303 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 KDM7AQ6ZMT4 941 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 CAGE1Q8TC20 777 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 GSDMAQ96QA5 445 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 STRN4Q9NRL3 753 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 TAB2Q9NYJ8 693 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms