RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 ZNF174Q15697 407 aa17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 FAM47AQ5JRC9 791 aa17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 TTC38Q5R3I4 469 aa17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 SH3RF1Q7Z6J0 888 aa17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 NBPF5PQ86XG9 351 aaPredicted RBP17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 TMEM139Q8IV31 216 aa17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 MED15Q96RN5 788 aa17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 NARFQ9UHQ1 456 aa17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 V9GYY5 206 aaPredicted RBP17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 PHLPP2Q6ZVD8 1323 aa17.16■□□□□ 0.34
TNFSF13-201ENST00000338784 SCN7AQ01118 1682 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 NHSQ6T4R5 1651 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 PRDX5P30044 214 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 AFMP43652 599 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 EVX2Q03828 476 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 SBK1Q52WX2 424 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 CCDC93Q567U6 631 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 ZNF397Q8NF99 534 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 BAG1Q99933 345 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 SAMSN1Q9NSI8 373 aaKnown RBP17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 OGFRQ9NZT2 677 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 WNT7AO00755 349 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 STX10O60499 249 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 SCG2P13521 617 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 ATP2C1P98194 919 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 SMIM5Q71RC9 77 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 REXO1L1PQ8IX06 675 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 GSDMAQ96QA5 445 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 DNAI1Q9UI46 699 aa17.15■□□□□ 0.34
TNFSF13-201ENST00000338784 BRWD3Q6RI45 1802 aa17.14■□□□□ 0.33
TNFSF13-201ENST00000338784 TSPY2A6NKD2 308 aa17.14■□□□□ 0.33
TNFSF13-201ENST00000338784 TRAPPC10P48553 1259 aa17.14■□□□□ 0.33
TNFSF13-201ENST00000338784 NLRP5P59047 1200 aa17.14■□□□□ 0.33
TNFSF13-201ENST00000338784 PTGDRQ13258 359 aa17.14■□□□□ 0.33
TNFSF13-201ENST00000338784 NR1I3Q14994 352 aa17.14■□□□□ 0.33
TNFSF13-201ENST00000338784 ELF2Q15723 593 aa17.14■□□□□ 0.33
TNFSF13-201ENST00000338784 A0A1B0GUL6 1792 aa17.14■□□□□ 0.33
TNFSF13-201ENST00000338784 VWA3AA6NCI4 1184 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 ZPR1O75312 459 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 DPYDQ12882 1025 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 PFKFB3Q16875 520 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 NOM1Q5C9Z4 860 aaKnown RBP17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 SPATA1Q5VX52 437 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 TRIM65Q6PJ69 517 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 TPTE2Q6XPS3 522 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 SEPT12Q8IYM1 358 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 TC2NQ8N9U0 490 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 SRP68Q9UHB9 627 aaKnown RBP17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 PPP2R2CQ9Y2T4 447 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 A0A1B0GTH6 734 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 CYP2D6P10635 497 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 KIF5BP33176 963 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 KMT5BQ4FZB7 885 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 SPTY2D1Q68D10 685 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 PIK3AP1Q6ZUJ8 805 aa17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.13■□□□□ 0.33
TNFSF13-201ENST00000338784 GOLGA6L9A6NEM1 432 aa17.12■□□□□ 0.33
TNFSF13-201ENST00000338784 ADKP55263 362 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-201ENST00000338784 CUL4BQ13620 913 aa17.12■□□□□ 0.33
TNFSF13-201ENST00000338784 DZIP1Q86YF9 867 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-201ENST00000338784 PYM1Q9BRP8 204 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-201ENST00000338784 PRDM10Q9NQV6 1147 aa17.12■□□□□ 0.33
TNFSF13-201ENST00000338784 MCM9Q9NXL9 1143 aa17.12■□□□□ 0.33
TNFSF13-201ENST00000338784 DDX41Q9UJV9 622 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-201ENST00000338784 BTAF1O14981 1849 aa17.12■□□□□ 0.33
TNFSF13-201ENST00000338784 SYNRGQ9UMZ2 1314 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 CD44P16070 742 aaKnown RBP17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 SF3B2Q13435 895 aaKnown RBP17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 KLHL10Q6JEL2 608 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 IQUBQ8NA54 791 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 TAF1P21675 1872 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 ZBTB22O15209 634 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 CASP1P29466 404 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 NT5C2P49902 561 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 RCSD1Q6JBY9 416 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 TXNRD3Q86VQ6 643 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 CTAGE1Q96RT6 745 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
TNFSF13-201ENST00000338784 MYH2Q9UKX2 1941 aa17.1■□□□□ 0.33
TNFSF13-201ENST00000338784 GNPATO15228 680 aa17.1■□□□□ 0.33
TNFSF13-201ENST00000338784 ZSCAN20P17040 1043 aaPredicted RBP17.1■□□□□ 0.33
TNFSF13-201ENST00000338784 CALML3P27482 149 aa17.1■□□□□ 0.33
TNFSF13-201ENST00000338784 FBXO38Q6PIJ6 1188 aa17.1■□□□□ 0.33
TNFSF13-201ENST00000338784 APTXQ7Z2E3 356 aaKnown RBP17.1■□□□□ 0.33
TNFSF13-201ENST00000338784 CCDC24Q8N4L8 307 aa17.1■□□□□ 0.33
TNFSF13-201ENST00000338784 SRRTQ9BXP5 876 aaKnown RBP17.1■□□□□ 0.33
TNFSF13-201ENST00000338784 JAG2Q9Y219 1238 aa17.1■□□□□ 0.33
TNFSF13-201ENST00000338784 DLEC1Q9Y238 1755 aa17.1■□□□□ 0.33
TNFSF13-201ENST00000338784 PPP1R3GB7ZBB8 358 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 TM4SF1P30408 202 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 MCM7P33993 719 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 STX17P56962 302 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 TFAP4Q01664 338 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 E2F4Q16254 413 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 ERCC6LQ2NKX8 1250 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms