RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 CHRNA5P30532 468 aa18.67■□□□□ 0.58
SCNN1A-202ENST00000338748 KIF5BP33176 963 aa18.67■□□□□ 0.58
SCNN1A-202ENST00000338748 GRM4Q14833 912 aa18.67■□□□□ 0.58
SCNN1A-202ENST00000338748 LONRF3Q496Y0 759 aa18.67■□□□□ 0.58
SCNN1A-202ENST00000338748 TYW1BQ6NUM6 668 aa18.67■□□□□ 0.58
SCNN1A-202ENST00000338748 POTEAQ6S8J7 498 aa18.67■□□□□ 0.58
SCNN1A-202ENST00000338748 USP49Q70CQ1 688 aa18.67■□□□□ 0.58
SCNN1A-202ENST00000338748 CPVLQ9H3G5 476 aa18.67■□□□□ 0.58
SCNN1A-202ENST00000338748 KCNH3Q9ULD8 1083 aa18.67■□□□□ 0.58
SCNN1A-202ENST00000338748 CAVIN2O95810 425 aa18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 EN1Q05925 392 aaPredicted RBP18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 METTL16Q86W50 562 aaKnown RBP18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 RGPD3A6NKT7 1758 aaPredicted RBP18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 RGPD4Q7Z3J3 1758 aa18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 FOXN1O15353 648 aa18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 GOLGA8HP0CJ92 632 aa18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 PNOCQ13519 176 aa18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 ISM2Q6H9L7 571 aa18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 PLA2G4DQ86XP0 818 aa18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 AOPEPQ8N6M6 819 aa18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 TIGD1Q96MW7 591 aa18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 PCDHAC2Q9Y5I4 1007 aa18.66■□□□□ 0.58
SCNN1A-202ENST00000338748 ZNF500O60304 480 aaPredicted RBP18.65■□□□□ 0.58
SCNN1A-202ENST00000338748 ZNF75DP51815 510 aa18.65■□□□□ 0.58
SCNN1A-202ENST00000338748 CEP57L1Q8IYX8 460 aa18.65■□□□□ 0.58
SCNN1A-202ENST00000338748 CEP95Q96GE4 821 aa18.65■□□□□ 0.58
SCNN1A-202ENST00000338748 PDGFDQ9GZP0 370 aaPredicted RBP18.65■□□□□ 0.58
SCNN1A-202ENST00000338748 SLURP2P0DP57 97 aa18.65■□□□□ 0.58
SCNN1A-202ENST00000338748 NEDD1Q8NHV4 660 aa18.65■□□□□ 0.58
SCNN1A-202ENST00000338748 TRIM5Q9C035 493 aa18.65■□□□□ 0.58
SCNN1A-202ENST00000338748 KCNF1Q9H3M0 494 aa18.65■□□□□ 0.58
SCNN1A-202ENST00000338748 TRIM75PA6NK02 468 aa18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 NT5C2P49902 561 aa18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 NLRP5P59047 1200 aa18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 SLC15A2Q16348 729 aa18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 CLEC10AQ8IUN9 316 aa18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 FOXP4Q8IVH2 680 aaPredicted RBP18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 CSRNP2Q9H175 543 aa18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 SUGT1Q9Y2Z0 365 aa18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 SRPRBQ9Y5M8 271 aaKnown RBP18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 KRBA2Q6ZNG9 492 aa18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 PIK3AP1Q6ZUJ8 805 aa18.64■□□□□ 0.57
SCNN1A-202ENST00000338748 PALM3A6NDB9 673 aaPredicted RBP18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 GOLGA6L19H0YKK7 550 aa18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 GABPAQ06546 454 aa18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 NFIAQ12857 509 aa18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 APOBEC3HQ6NTF7 200 aaKnown RBP18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 RASGRP4Q8TDF6 673 aa18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 CAMKK2Q96RR4 588 aa18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 ZNF287Q9HBT7 754 aa18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 BRMS1Q9HCU9 246 aa18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 NRBP1Q9UHY1 535 aa18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 TUBE1Q9UJT0 475 aa18.63■□□□□ 0.57
SCNN1A-202ENST00000338748 H0YIN7 160 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 POLR2DO15514 142 aaKnown RBP18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 ZNF174Q15697 407 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 CDC42EP5Q6NZY7 148 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 USP40Q9NVE5 1235 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 ZNF646O15015 1829 aaPredicted RBP18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 BECN2A8MW95 431 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 G3V3G9 751 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 NLRP12P59046 1061 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 CCDC178Q5BJE1 867 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 DCAF8Q5TAQ9 597 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 WWC2Q6AWC2 1192 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 USP17L2Q6R6M4 530 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 PDILTQ8N807 584 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 CNNM3Q8NE01 707 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 CEP131Q9UPN4 1083 aa18.62■□□□□ 0.57
SCNN1A-202ENST00000338748 A0A087X0B3 334 aa18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 TTC38Q5R3I4 469 aa18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 KIAA0825Q8IV33 1275 aa18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 GRAMD1CQ8IYS0 662 aa18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 TMX4Q9H1E5 349 aaPredicted RBP18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 PRR29P0C7W0 189 aa18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 AKR1B1P15121 316 aa18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 PTGS1P23219 599 aa18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 MDM2Q00987 491 aaPredicted RBP18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 STYK1Q6J9G0 422 aa18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 SARM1Q6SZW1 724 aa18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 ZNF579Q8NAF0 562 aaKnown RBP18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 EPSTI1Q96J88 318 aa18.61■□□□□ 0.57
SCNN1A-202ENST00000338748 KLRF2D3W0D1 207 aa18.6■□□□□ 0.57
SCNN1A-202ENST00000338748 NOVP48745 357 aa18.6■□□□□ 0.57
SCNN1A-202ENST00000338748 CACNB3P54284 484 aa18.6■□□□□ 0.57
SCNN1A-202ENST00000338748 ZRSR1Q15695 479 aaKnown RBP18.6■□□□□ 0.57
SCNN1A-202ENST00000338748 ZFPM1Q8IX07 1006 aa18.6■□□□□ 0.57
SCNN1A-202ENST00000338748 TEKT1Q969V4 418 aa18.6■□□□□ 0.57
SCNN1A-202ENST00000338748 SERTAD1Q9UHV2 236 aa18.6■□□□□ 0.57
SCNN1A-202ENST00000338748 MYH8P13535 1937 aa18.6■□□□□ 0.57
SCNN1A-202ENST00000338748 ECE2O60344 883 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 BMP6P22004 513 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 CRKP46108 304 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 EIF6P56537 245 aaKnown RBP18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 NCAPHQ15003 741 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 HEATR3Q7Z4Q2 680 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 PODNQ7Z5L7 613 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 NAT10Q9H0A0 1025 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms