RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ENGASEQ8NFI3 743 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 CEP95Q96GE4 821 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 SPZ1Q9BXG8 430 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 MTMR4Q9NYA4 1195 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 HDAC9Q9UKV0 1011 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 CEP131Q9UPN4 1083 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 MYH8P13535 1937 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 ADAMTSL1Q8N6G6 1762 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 CMA1P23946 247 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 NFIAQ12857 509 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 DALRD3Q5D0E6 543 aaKnown RBP18.72■□□□□ 0.59
HPS1-202ENST00000338546 GALNT17Q6IS24 598 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 METTL16Q86W50 562 aaKnown RBP18.72■□□□□ 0.59
HPS1-202ENST00000338546 GMLQ99445 158 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 BMP15O95972 392 aa18.71■□□□□ 0.59
HPS1-202ENST00000338546 PARP1P09874 1014 aaKnown RBP18.71■□□□□ 0.59
HPS1-202ENST00000338546 SHMT1P34896 483 aa18.71■□□□□ 0.59
HPS1-202ENST00000338546 SNW1Q13573 536 aaKnown RBP18.71■□□□□ 0.59
HPS1-202ENST00000338546 CFAP100Q494V2 611 aa18.71■□□□□ 0.59
HPS1-202ENST00000338546 AXDND1Q5T1B0 1012 aaPredicted RBP18.71■□□□□ 0.59
HPS1-202ENST00000338546 FSIP1Q8NA03 581 aa18.71■□□□□ 0.59
HPS1-202ENST00000338546 VPS54Q9P1Q0 977 aa18.71■□□□□ 0.59
HPS1-202ENST00000338546 ZNRF3Q9ULT6 936 aa18.71■□□□□ 0.59
HPS1-202ENST00000338546 ATRNL1Q5VV63 1379 aa18.71■□□□□ 0.59
HPS1-202ENST00000338546 FAM237AA0A1B0GTK4 181 aa18.7■□□□□ 0.58
HPS1-202ENST00000338546 KINO60870 393 aaKnown RBP18.7■□□□□ 0.58
HPS1-202ENST00000338546 ZBTB7AO95365 584 aa18.7■□□□□ 0.58
HPS1-202ENST00000338546 CAVIN2O95810 425 aa18.7■□□□□ 0.58
HPS1-202ENST00000338546 TTLL1O95922 423 aa18.7■□□□□ 0.58
HPS1-202ENST00000338546 TPRNQ4KMQ1 711 aa18.7■□□□□ 0.58
HPS1-202ENST00000338546 AGBL3Q8NEM8 1001 aa18.7■□□□□ 0.58
HPS1-202ENST00000338546 FAM198AQ9UFP1 575 aa18.7■□□□□ 0.58
HPS1-202ENST00000338546 CD2APQ9Y5K6 639 aa18.7■□□□□ 0.58
HPS1-202ENST00000338546 GREB1LQ9C091 1923 aaPredicted RBP18.7■□□□□ 0.58
HPS1-202ENST00000338546 CUTAO60888 179 aa18.69■□□□□ 0.58
HPS1-202ENST00000338546 TRAPPC10P48553 1259 aa18.69■□□□□ 0.58
HPS1-202ENST00000338546 CCDC173Q0VFZ6 552 aa18.69■□□□□ 0.58
HPS1-202ENST00000338546 NIM1KQ8IY84 436 aa18.69■□□□□ 0.58
HPS1-202ENST00000338546 FMR1NBQ8N0W7 255 aaPredicted RBP18.69■□□□□ 0.58
HPS1-202ENST00000338546 MTMR14Q8NCE2 650 aa18.69■□□□□ 0.58
HPS1-202ENST00000338546 CCDC148Q8NFR7 591 aa18.69■□□□□ 0.58
HPS1-202ENST00000338546 NOL7Q9UMY1 257 aaKnown RBP18.69■□□□□ 0.58
HPS1-202ENST00000338546 SNHG28P0DPA3 235 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 AKR1B1P15121 316 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 TOB1P50616 345 aaPredicted RBP18.68■□□□□ 0.58
HPS1-202ENST00000338546 ASPRV1Q53RT3 343 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 STAG2Q8N3U4 1231 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 OGFOD1Q8N543 542 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 SHISA4Q96DD7 197 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 PANK2Q9BZ23 570 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 GOLPH3LQ9H4A5 285 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 ZNF277Q9NRM2 450 aaPredicted RBP18.68■□□□□ 0.58
HPS1-202ENST00000338546 TMOD2Q9NZR1 351 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 BRCA1P38398 1863 aaKnown RBP18.68■□□□□ 0.58
HPS1-202ENST00000338546 KLRF2D3W0D1 207 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 hCG_1984214I3L0E3 225 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 PSMD14O00487 310 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 NR5A1Q13285 461 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 NPY5RQ15761 445 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 FKBP1CQ5VVH2 108 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 TATDN1Q6P1N9 297 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 ZNF713Q8N859 430 aaPredicted RBP18.68■□□□□ 0.58
HPS1-202ENST00000338546 ZNF579Q8NAF0 562 aaKnown RBP18.68■□□□□ 0.58
HPS1-202ENST00000338546 CCDC12Q8WUD4 166 aaPredicted RBP18.68■□□□□ 0.58
HPS1-202ENST00000338546 TNFRSF25Q93038 417 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 TIGD1Q96MW7 591 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 PPP1R9BQ96SB3 815 aa18.68■□□□□ 0.58
HPS1-202ENST00000338546 SPDYE2BA6NHP3 402 aa18.67■□□□□ 0.58
HPS1-202ENST00000338546 SPDYE6P0CI01 402 aa18.67■□□□□ 0.58
HPS1-202ENST00000338546 NLRP5P59047 1200 aa18.67■□□□□ 0.58
HPS1-202ENST00000338546 KRI1Q8N9T8 703 aaKnown RBP18.67■□□□□ 0.58
HPS1-202ENST00000338546 DAGLBQ8NCG7 672 aa18.67■□□□□ 0.58
HPS1-202ENST00000338546 OXER1Q8TDS5 423 aa18.67■□□□□ 0.58
HPS1-202ENST00000338546 MKL1Q969V6 931 aa18.67■□□□□ 0.58
HPS1-202ENST00000338546 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
HPS1-202ENST00000338546 FER1L6Q2WGJ9 1857 aa18.67■□□□□ 0.58
HPS1-202ENST00000338546 ZFPM1Q8IX07 1006 aa18.66■□□□□ 0.58
HPS1-202ENST00000338546 PRMT6Q96LA8 375 aaPredicted RBP18.66■□□□□ 0.58
HPS1-202ENST00000338546 SGIP1Q9BQI5 828 aa18.66■□□□□ 0.58
HPS1-202ENST00000338546 TRIM34Q9BYJ4 488 aa18.66■□□□□ 0.58
HPS1-202ENST00000338546 TAOK3Q9H2K8 898 aa18.66■□□□□ 0.58
HPS1-202ENST00000338546 RIOX1Q9H6W3 641 aa18.66■□□□□ 0.58
HPS1-202ENST00000338546 CABP5Q9NP86 173 aa18.66■□□□□ 0.58
HPS1-202ENST00000338546 BARHL2Q9NY43 387 aa18.66■□□□□ 0.58
HPS1-202ENST00000338546 SIPA1L1O43166 1804 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 hCG_1642624A0A1W2PR95 340 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 DDTLA6NHG4 134 aaPredicted RBP18.65■□□□□ 0.58
HPS1-202ENST00000338546 TRIM75PA6NK02 468 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 CYTH3O43739 400 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 PDHBP11177 359 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 PTPREP23469 700 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 DLGAP5Q15398 846 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 CAMK4Q16566 473 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 SASS6Q6UVJ0 657 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 ELOA2Q8IYF1 753 aaPredicted RBP18.65■□□□□ 0.58
HPS1-202ENST00000338546 RRP36Q96EU6 259 aaKnown RBP18.65■□□□□ 0.58
HPS1-202ENST00000338546 TDRD3Q9H7E2 651 aaKnown RBP18.65■□□□□ 0.58
HPS1-202ENST00000338546 KANSL2Q9H9L4 492 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 NYAP2Q9P242 653 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 HERC5Q9UII4 1024 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms