RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 COG2Q14746 738 aa16.07■□□□□ 0.16
NUDCD3-201ENST00000338427 C16orf86Q6ZW13 317 aa16.07■□□□□ 0.16
NUDCD3-201ENST00000338427 NPLOC4Q8TAT6 608 aa16.07■□□□□ 0.16
NUDCD3-201ENST00000338427 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.07■□□□□ 0.16
NUDCD3-201ENST00000338427 CWC22Q9HCG8 908 aaKnown RBP16.07■□□□□ 0.16
NUDCD3-201ENST00000338427 XRCC5P13010 732 aaKnown RBP16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 PTPREP23469 700 aa16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 RGS2P41220 211 aa16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 MAP2K5Q13163 448 aa16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 MAP3K21Q5TCX8 1036 aa16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 CHRDL2Q6WN34 429 aa16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 LBX2Q6XYB7 198 aa16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 MOV10L1Q9BXT6 1211 aaKnown RBP16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 TANGO6Q9C0B7 1094 aa16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 TMX2Q9Y320 296 aa16.06■□□□□ 0.16
NUDCD3-201ENST00000338427 CEP290O15078 2479 aa16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 ZKSCAN1P17029 563 aaPredicted RBP16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 DSG3P32926 999 aa16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 ICA1Q05084 483 aa16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 PI4K2BQ8TCG2 481 aa16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 GTF3C2Q8WUA4 911 aaPredicted RBP16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 ATG4CQ96DT6 458 aa16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 HTATIP2Q9BUP3 242 aa16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 EPB41L4AQ9HCS5 686 aaPredicted RBP16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 FBXO28Q9NVF7 368 aa16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 HOXC10Q9NYD6 342 aa16.05■□□□□ 0.16
NUDCD3-201ENST00000338427 GPAA1O43292 621 aa16.04■□□□□ 0.16
NUDCD3-201ENST00000338427 RAD21O60216 631 aa16.04■□□□□ 0.16
NUDCD3-201ENST00000338427 PLS1Q14651 629 aa16.04■□□□□ 0.16
NUDCD3-201ENST00000338427 ANKRD45Q5TZF3 282 aa16.04■□□□□ 0.16
NUDCD3-201ENST00000338427 LHX8Q68G74 356 aa16.04■□□□□ 0.16
NUDCD3-201ENST00000338427 SOCS4Q8WXH5 440 aa16.04■□□□□ 0.16
NUDCD3-201ENST00000338427 APPBP2Q92624 585 aa16.04■□□□□ 0.16
NUDCD3-201ENST00000338427 CCDC17Q96LX7 622 aa16.04■□□□□ 0.16
NUDCD3-201ENST00000338427 VCPKMTQ9H867 229 aa16.04■□□□□ 0.16
NUDCD3-201ENST00000338427 ARHGEF10LQ9HCE6 1279 aa16.04■□□□□ 0.16
NUDCD3-201ENST00000338427 SLC15A5A6NIM6 579 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 COBLO75128 1261 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 PRDM1O75626 825 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 FLOT1O75955 427 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 APPP05067 770 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 ERCC3P19447 782 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 RASA1P20936 1047 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 CYP2C19P33261 490 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 FXR1P51114 621 aaKnown RBP eCLIP16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 CCNA1P78396 465 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 NECAB2Q7Z6G3 386 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 AMOTL1Q8IY63 956 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 TRPV1Q8NER1 839 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 DDRGK1Q96HY6 314 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 INCENPQ9NQS7 918 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 RBM27Q9P2N5 1060 aaKnown RBP16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 OGDHLQ9ULD0 1010 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 MYH7P12883 1935 aa16.03■□□□□ 0.16
NUDCD3-201ENST00000338427 RLFQ13129 1914 aa16.02■□□□□ 0.16
NUDCD3-201ENST00000338427 EVI5O60447 810 aa16.02■□□□□ 0.16
NUDCD3-201ENST00000338427 CCDC129Q6ZRS4 1044 aa16.02■□□□□ 0.16
NUDCD3-201ENST00000338427 IFNL3Q8IZI9 196 aa16.02■□□□□ 0.16
NUDCD3-201ENST00000338427 NUP88Q99567 741 aaPredicted RBP16.02■□□□□ 0.16
NUDCD3-201ENST00000338427 SPATC1LQ9H0A9 340 aa16.02■□□□□ 0.16
NUDCD3-201ENST00000338427 KANSL2Q9H9L4 492 aa16.02■□□□□ 0.16
NUDCD3-201ENST00000338427 MKNK2Q9HBH9 465 aa16.02■□□□□ 0.16
NUDCD3-201ENST00000338427 STAP2Q9UGK3 403 aa16.02■□□□□ 0.16
NUDCD3-201ENST00000338427 PATL2C9JE40 543 aaKnown RBP16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 GLRX3O76003 335 aaKnown RBP16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 GRB14Q14449 540 aa16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 TMEM132BQ14DG7 1078 aa16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 PRAMEF19Q5SWL8 479 aa16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 FAM83BQ5T0W9 1011 aa16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 NCAPG2Q86XI2 1143 aa16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 CHMP4CQ96CF2 233 aa16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 APBA2Q99767 749 aa16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 ZMYND8Q9ULU4 1186 aaPredicted RBP16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 NR2E3Q9Y5X4 410 aa16.01■□□□□ 0.15
NUDCD3-201ENST00000338427 ADORA2AP29274 412 aa16■□□□□ 0.15
NUDCD3-201ENST00000338427 CNGA1P29973 690 aa16■□□□□ 0.15
NUDCD3-201ENST00000338427 ANO1Q5XXA6 986 aa16■□□□□ 0.15
NUDCD3-201ENST00000338427 DPP9Q86TI2 863 aa16■□□□□ 0.15
NUDCD3-201ENST00000338427 TRMT44Q8IYL2 757 aaKnown RBP16■□□□□ 0.15
NUDCD3-201ENST00000338427 C7orf61Q8IZ16 206 aa16■□□□□ 0.15
NUDCD3-201ENST00000338427 FSD1Q9BTV5 496 aa16■□□□□ 0.15
NUDCD3-201ENST00000338427 NBPF3Q9H094 633 aa16■□□□□ 0.15
NUDCD3-201ENST00000338427 C11orf49Q9H6J7 331 aa16■□□□□ 0.15
NUDCD3-201ENST00000338427 ARPP21Q9UBL0 812 aaPredicted RBP16■□□□□ 0.15
NUDCD3-201ENST00000338427 CLIP2Q9UDT6 1046 aa16■□□□□ 0.15
NUDCD3-201ENST00000338427 IVNS1ABPQ9Y6Y0 642 aa16■□□□□ 0.15
NUDCD3-201ENST00000338427 TTC41PQ6P2S7 1318 aa15.99■□□□□ 0.15
NUDCD3-201ENST00000338427 SALL3Q9BXA9 1300 aa15.99■□□□□ 0.15
NUDCD3-201ENST00000338427 ZFYP08048 801 aaPredicted RBP15.99■□□□□ 0.15
NUDCD3-201ENST00000338427 SYN1P17600 705 aa15.99■□□□□ 0.15
NUDCD3-201ENST00000338427 MX1P20591 662 aa15.99■□□□□ 0.15
NUDCD3-201ENST00000338427 TDO2P48775 406 aa15.99■□□□□ 0.15
NUDCD3-201ENST00000338427 FAM47AQ5JRC9 791 aa15.99■□□□□ 0.15
NUDCD3-201ENST00000338427 ZMYM1Q5SVZ6 1142 aa15.99■□□□□ 0.15
NUDCD3-201ENST00000338427 MFSD14CQ5VZR4 134 aa15.99■□□□□ 0.15
NUDCD3-201ENST00000338427 GIMAP6Q6P9H5 292 aa15.99■□□□□ 0.15
NUDCD3-201ENST00000338427 LPAR1Q92633 364 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms