RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBE2D3-202ENST00000338145 DNAAF2Q9NVR5 837 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-202ENST00000338145 PCDHAC2Q9Y5I4 1007 aa11.8□□□□□ -0.52
UBE2D3-202ENST00000338145 NEURL1BA8MQ27 555 aa11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 IL2RAP01589 272 aa11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 CSF1RP07333 972 aa11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 GJB1P08034 283 aa11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 CTSOP43234 321 aaPredicted RBP11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 GDF10P55107 478 aa11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 FOXD4L5Q5VV16 416 aaPredicted RBP11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 UBE3BQ7Z3V4 1068 aa11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 SHISA4Q96DD7 197 aa11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 ETNK1Q9HBU6 452 aa11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 ZNF70Q9UC06 446 aaPredicted RBP11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 IRS2Q9Y4H2 1338 aa11.79□□□□□ -0.52
UBE2D3-202ENST00000338145 ANKRD18BA2A2Z9 1011 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 MEN1O00255 615 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 GRK4P32298 578 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 UBXN2AP68543 259 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 CLDN10P78369 228 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 SNAPC2Q13487 334 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 UBE2Q1Q7Z7E8 422 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 ERO1BQ86YB8 467 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 RAET1EQ8TD07 263 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 HOOK2Q96ED9 719 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 TEPSINQ96N21 525 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 ARHGAP39Q9C0H5 1083 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 SRRDQ9UH36 339 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 SPEF2Q9C093 1822 aa11.78□□□□□ -0.52
UBE2D3-202ENST00000338145 BTBD19C9JJ37 291 aa11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 M0R2N6 131 aa11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 BACH1O14867 736 aa11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 ZBTB7BO15156 539 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 MAN1A2O60476 641 aa11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 MTFR1Q15390 333 aa11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 CWF19L2Q2TBE0 894 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 C17orf99Q6UX52 265 aa11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 STK31Q9BXU1 1019 aa11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 MYH16Q9H6N6 1097 aa11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 TDRD3Q9H7E2 651 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 RIPOR2Q9Y4F9 1068 aa11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 FAM205AQ6ZU69 1335 aa11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 RANBP2P49792 3224 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-202ENST00000338145 TMEM229AB2RXF0 380 aa11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 TAF5LO75529 589 aa11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 SNRPBP14678 240 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 RASA1P20936 1047 aa11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 PSMC4P43686 418 aa11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 GCKRQ14397 625 aa11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 DZIP1LQ8IYY4 767 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 C8orf58Q8NAV2 365 aa11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 GRIP2Q9C0E4 1043 aa11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 RNF208Q9H0X6 261 aa11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 RAB6BQ9NRW1 208 aa11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 DNMT3LQ9UJW3 386 aa11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 TTF2Q9UNY4 1162 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-202ENST00000338145 COL6A3P12111 3177 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 CEP290O15078 2479 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 TCP10L2B9ZVM9 353 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 CCL5P13501 91 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 PPIL2Q13356 520 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 WDR44Q5JSH3 913 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 MFSD14BQ5SR56 506 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 CCDC102BQ68D86 513 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 PBXIP1Q96AQ6 731 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 TMEM39BQ9GZU3 492 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 BIN2Q9UBW5 565 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 OTOFQ9HC10 1997 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 AOX1Q06278 1338 aa11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 MYBBP1AQ9BQG0 1328 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-202ENST00000338145 SNAP23O00161 211 aa11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 FARP2O94887 1054 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 CASP7P55210 303 aa11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 CENPCQ03188 943 aa11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 PPATQ06203 517 aa11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 PTK7Q13308 1070 aa11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 LYSMD3Q7Z3D4 306 aa11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 ANKRD23Q86SG2 305 aa11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 TDRD7Q8NHU6 1098 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 KIAA1024Q9UPX6 916 aa11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 SNCAIPQ9Y6H5 919 aa11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 MYPNQ86TC9 1320 aa11.74□□□□□ -0.53
UBE2D3-202ENST00000338145 A0A0C4DFX4 3053 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 SPATA31C2B4DYI2 1134 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L15C9J2P7 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L10C9JJH3 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L13C9JLJ4 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L12C9JPN9 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L11C9JVI0 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L21D6R901 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L18D6R9N7 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L22D6RA61 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L17D6RBQ6 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L19D6RCP7 530 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms