RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 hCG_1642624A0A1W2PR95 340 aa17.05■□□□□ 0.32
CBX3-201ENST00000337620 LMOD1P29536 600 aaPredicted RBP17.05■□□□□ 0.32
CBX3-201ENST00000337620 FUT2Q10981 343 aa17.05■□□□□ 0.32
CBX3-201ENST00000337620 RRP1BQ14684 758 aaKnown RBP17.05■□□□□ 0.32
CBX3-201ENST00000337620 PPP4R3BQ5MIZ7 849 aa17.05■□□□□ 0.32
CBX3-201ENST00000337620 ANGEL2Q5VTE6 544 aaKnown RBP17.05■□□□□ 0.32
CBX3-201ENST00000337620 TMEM179Q6ZVK1 233 aa17.05■□□□□ 0.32
CBX3-201ENST00000337620 RNF26Q9BY78 433 aaPredicted RBP17.05■□□□□ 0.32
CBX3-201ENST00000337620 DEFB129Q9H1M3 183 aa17.05■□□□□ 0.32
CBX3-201ENST00000337620 KANSL2Q9H9L4 492 aa17.05■□□□□ 0.32
CBX3-201ENST00000337620 GRIN3BO60391 1043 aa17.04■□□□□ 0.32
CBX3-201ENST00000337620 GH2P01242 217 aa17.04■□□□□ 0.32
CBX3-201ENST00000337620 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
CBX3-201ENST00000337620 TRIM29Q14134 588 aa17.04■□□□□ 0.32
CBX3-201ENST00000337620 USP17L2Q6R6M4 530 aa17.04■□□□□ 0.32
CBX3-201ENST00000337620 RASGRP2Q7LDG7 609 aa17.04■□□□□ 0.32
CBX3-201ENST00000337620 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
CBX3-201ENST00000337620 TBC1D12O60347 775 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 NCLP19338 710 aaKnown RBP17.03■□□□□ 0.32
CBX3-201ENST00000337620 GNAQP50148 359 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 JAG1P78504 1218 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 FAM173BQ6P4H8 233 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 ZSCAN16Q9H4T2 348 aaPredicted RBP17.03■□□□□ 0.32
CBX3-201ENST00000337620 USP17L5A8MUK1 530 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 PARP1P09874 1014 aaKnown RBP17.03■□□□□ 0.32
CBX3-201ENST00000337620 EEF2P13639 858 aaKnown RBP17.03■□□□□ 0.32
CBX3-201ENST00000337620 HIRAP54198 1017 aaPredicted RBP17.03■□□□□ 0.32
CBX3-201ENST00000337620 ICA1Q05084 483 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 DNM1Q05193 864 aaKnown RBP17.03■□□□□ 0.32
CBX3-201ENST00000337620 RESTQ13127 1097 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 TEPSINQ96N21 525 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
CBX3-201ENST00000337620 PALM3A6NDB9 673 aaPredicted RBP17.02■□□□□ 0.32
CBX3-201ENST00000337620 KRT40Q6A162 431 aa17.02■□□□□ 0.32
CBX3-201ENST00000337620 NYAP2Q9P242 653 aa17.02■□□□□ 0.32
CBX3-201ENST00000337620 CNPY2Q9Y2B0 182 aa17.02■□□□□ 0.32
CBX3-201ENST00000337620 GREB1LQ9C091 1923 aaPredicted RBP17.02■□□□□ 0.32
CBX3-201ENST00000337620 KLRF2D3W0D1 207 aa17.02■□□□□ 0.31
CBX3-201ENST00000337620 RAD21O60216 631 aa17.02■□□□□ 0.31
CBX3-201ENST00000337620 PRPF40AO75400 957 aaKnown RBP17.02■□□□□ 0.31
CBX3-201ENST00000337620 PDHBP11177 359 aa17.02■□□□□ 0.31
CBX3-201ENST00000337620 APOBEC3FQ8IUX4 373 aaKnown RBP17.02■□□□□ 0.31
CBX3-201ENST00000337620 GDPD2Q9HCC8 539 aa17.02■□□□□ 0.31
CBX3-201ENST00000337620 ADARB2Q9NS39 739 aaKnown RBP17.02■□□□□ 0.31
CBX3-201ENST00000337620 GGA3Q9NZ52 723 aa17.02■□□□□ 0.31
CBX3-201ENST00000337620 PKN1Q16512 942 aa17.01■□□□□ 0.31
CBX3-201ENST00000337620 FRMPD2Q68DX3 1309 aaPredicted RBP17.01■□□□□ 0.31
CBX3-201ENST00000337620 BAZ2BQ9UIF8 2168 aaKnown RBP17.01■□□□□ 0.31
CBX3-201ENST00000337620 MAP3K10Q02779 954 aa17■□□□□ 0.31
CBX3-201ENST00000337620 SIAH1Q8IUQ4 282 aa17■□□□□ 0.31
CBX3-201ENST00000337620 MKL1Q969V6 931 aa17■□□□□ 0.31
CBX3-201ENST00000337620 LZTS2Q9BRK4 669 aa17■□□□□ 0.31
CBX3-201ENST00000337620 MYH4Q9Y623 1939 aa17■□□□□ 0.31
CBX3-201ENST00000337620 PTMSP20962 102 aa17■□□□□ 0.31
CBX3-201ENST00000337620 NBPF12Q5TAG4 269 aaPredicted RBP17■□□□□ 0.31
CBX3-201ENST00000337620 PRAMEF18Q5VWM3 479 aa17■□□□□ 0.31
CBX3-201ENST00000337620 CPVLQ9H3G5 476 aa17■□□□□ 0.31
CBX3-201ENST00000337620 KCNJ14Q9UNX9 436 aa17■□□□□ 0.31
CBX3-201ENST00000337620 MYH6P13533 1939 aa17■□□□□ 0.31
CBX3-201ENST00000337620 TCHHQ07283 1943 aa17■□□□□ 0.31
CBX3-201ENST00000337620 FIBPO43427 364 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 XBP1P17861 261 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 GNL2Q13823 731 aaKnown RBP16.99■□□□□ 0.31
CBX3-201ENST00000337620 RGS22Q8NE09 1264 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 GPCPD1Q9NPB8 672 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 LMBRD1Q9NUN5 540 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 TFIP11Q9UBB9 837 aaKnown RBP16.99■□□□□ 0.31
CBX3-201ENST00000337620 ZBTB21Q9ULJ3 1066 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
CBX3-201ENST00000337620 SOCS7O14512 581 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 CYTH3O43739 400 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 SNHG28P0DPA3 235 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 CAP2P40123 477 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 KRT85P78386 507 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 ASPRV1Q53RT3 343 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 USP48Q86UV5 1035 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 UBA5Q9GZZ9 404 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 VAT1LQ9HCJ6 419 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 VPS54Q9P1Q0 977 aa16.99■□□□□ 0.31
CBX3-201ENST00000337620 SCG2P13521 617 aa16.98■□□□□ 0.31
CBX3-201ENST00000337620 KIF23Q02241 960 aaPredicted RBP16.98■□□□□ 0.31
CBX3-201ENST00000337620 SAFBQ15424 915 aaKnown RBP eCLIP16.98■□□□□ 0.31
CBX3-201ENST00000337620 CCDC96Q2M329 555 aa16.98■□□□□ 0.31
CBX3-201ENST00000337620 SLC35G1Q2M3R5 365 aa16.98■□□□□ 0.31
CBX3-201ENST00000337620 RBM27Q9P2N5 1060 aaKnown RBP16.98■□□□□ 0.31
CBX3-201ENST00000337620 KIF28PB7ZC32 967 aa16.97■□□□□ 0.31
CBX3-201ENST00000337620 TRAK2O60296 914 aa16.97■□□□□ 0.31
CBX3-201ENST00000337620 ZNF543Q08ER8 600 aa16.97■□□□□ 0.31
CBX3-201ENST00000337620 PFKFB3Q16875 520 aaPredicted RBP16.97■□□□□ 0.31
CBX3-201ENST00000337620 SLFN13Q68D06 897 aa16.97■□□□□ 0.31
CBX3-201ENST00000337620 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.97■□□□□ 0.31
CBX3-201ENST00000337620 PHF20L1A8MW92 1017 aa16.97■□□□□ 0.31
CBX3-201ENST00000337620 MMP1P03956 469 aa16.97■□□□□ 0.31
CBX3-201ENST00000337620 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
CBX3-201ENST00000337620 KCTD1Q719H9 257 aa16.97■□□□□ 0.31
CBX3-201ENST00000337620 SPZ1Q9BXG8 430 aa16.97■□□□□ 0.31
CBX3-201ENST00000337620 ARHGEF10LQ9HCE6 1279 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms