RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 TACO1Q9BSH4 297 aaKnown RBP12.35□□□□□ -0.43
LRAT-201ENST00000336356 TPCN1Q9ULQ1 816 aa12.35□□□□□ -0.43
LRAT-201ENST00000336356 IKBKBO14920 756 aa12.35□□□□□ -0.43
LRAT-201ENST00000336356 CLSTN1O94985 981 aa12.35□□□□□ -0.43
LRAT-201ENST00000336356 HOXD10P28358 340 aa12.35□□□□□ -0.43
LRAT-201ENST00000336356 NUP133Q8WUM0 1156 aa12.35□□□□□ -0.43
LRAT-201ENST00000336356 PPFIA3O75145 1194 aa12.35□□□□□ -0.43
LRAT-201ENST00000336356 GUCY2CP25092 1073 aa12.35□□□□□ -0.43
LRAT-201ENST00000336356 TRIM28Q13263 835 aaKnown RBP12.35□□□□□ -0.43
LRAT-201ENST00000336356 CDK5RAP3Q96JB5 506 aa12.35□□□□□ -0.43
LRAT-201ENST00000336356 LUC7L2Q9Y383 392 aaKnown RBP12.35□□□□□ -0.43
LRAT-201ENST00000336356 LOC102724159A0A0B4J2E5 919 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 PNMA6EA0A0J9YXQ4 647 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 KCNJ6P48051 423 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 PWP2Q15269 919 aaKnown RBP12.34□□□□□ -0.43
LRAT-201ENST00000336356 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 AP1ARQ63HQ0 302 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 LSG1Q9H089 658 aaKnown RBP12.34□□□□□ -0.43
LRAT-201ENST00000336356 NFE2L3Q9Y4A8 694 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 CEP83Q9Y592 693 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 A0A1W2PQ27 194 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 A0A1W2PQ64 194 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 A0A1W2PQD8 194 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 A0A0G2JLW4 131 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 NEURL1BA8MQ27 555 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 CYP7A1P22680 504 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 SLC12A7Q9Y666 1083 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 CCDC144BQ3MJ40 725 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 C9orf131Q5VYM1 1079 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 CCDC144CPQ8IYA2 1237 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 CUL5Q93034 780 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 ARHGEF10LQ9HCE6 1279 aa12.34□□□□□ -0.43
LRAT-201ENST00000336356 JAK2O60674 1132 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 RNF40O75150 1001 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 MTIF2P46199 727 aaKnown RBP12.33□□□□□ -0.44
LRAT-201ENST00000336356 SSBP05455 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
LRAT-201ENST00000336356 GTF2IP78347 998 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 KRI1Q8N9T8 703 aaKnown RBP12.33□□□□□ -0.44
LRAT-201ENST00000336356 USP28Q96RU2 1077 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 TSGA10Q9BZW7 698 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.44
LRAT-201ENST00000336356 GCKP35557 465 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 PAIP2Q9BPZ3 127 aaKnown RBP12.33□□□□□ -0.44
LRAT-201ENST00000336356 RCOR1Q9UKL0 485 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 CDHR2Q9BYE9 1310 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 TDRD12Q587J7 1177 aaKnown RBP12.33□□□□□ -0.44
LRAT-201ENST00000336356 RRAGBQ5VZM2 374 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 SND1Q7KZF4 910 aaKnown RBP eCLIP12.33□□□□□ -0.44
LRAT-201ENST00000336356 SMARCC2Q8TAQ2 1214 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 CCDC113Q9H0I3 377 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
LRAT-201ENST00000336356 ST7Q9NRC1 585 aa12.33□□□□□ -0.44
LRAT-201ENST00000336356 BUB1BO60566 1050 aaPredicted RBP12.32□□□□□ -0.44
LRAT-201ENST00000336356 CCNA1P78396 465 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 ARID5BQ14865 1188 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 MFSD14BQ5SR56 506 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 TBC1D9BQ66K14 1250 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 G2E3Q7L622 706 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 BICC1Q9H694 974 aaKnown RBP12.32□□□□□ -0.44
LRAT-201ENST00000336356 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.32□□□□□ -0.44
LRAT-201ENST00000336356 MYO1AQ9UBC5 1043 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 ODF2LQ9ULJ1 636 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 CWF19L2Q2TBE0 894 aaKnown RBP12.32□□□□□ -0.44
LRAT-201ENST00000336356 SLC10A4Q96EP9 437 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 SPATS2LQ9NUQ6 558 aaKnown RBP12.32□□□□□ -0.44
LRAT-201ENST00000336356 KCNH3Q9ULD8 1083 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 USP27XA6NNY8 438 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 TRIM66O15016 1216 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 IDEP14735 1019 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 CASP8Q14790 479 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 TEX11Q8IYF3 940 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 CCDC42Q96M95 316 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 ARHGEF28Q8N1W1 1705 aaKnown RBP12.32□□□□□ -0.44
LRAT-201ENST00000336356 CUTAO60888 179 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 SSH3Q8TE77 659 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 SAR1BQ9Y6B6 198 aa12.32□□□□□ -0.44
LRAT-201ENST00000336356 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 PRR5LQ6MZQ0 368 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 SWAP70Q9UH65 585 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 PNMA3Q9UL41 463 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 ZNF853P0CG23 659 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 ADKP55263 362 aaKnown RBP12.31□□□□□ -0.44
LRAT-201ENST00000336356 PPP2R5AQ15172 486 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 MYO5BQ9ULV0 1848 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 CHUKO15111 745 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 TADA3O75528 432 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 GYS1P13807 737 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 IFI16Q16666 785 aaKnown RBP12.31□□□□□ -0.44
LRAT-201ENST00000336356 IFT20Q8IY31 132 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 SMCR8Q8TEV9 937 aaPredicted RBP12.31□□□□□ -0.44
LRAT-201ENST00000336356 RABEP2Q9H5N1 569 aa12.31□□□□□ -0.44
LRAT-201ENST00000336356 ERCC3P19447 782 aa12.3□□□□□ -0.44
LRAT-201ENST00000336356 LACTBP83111 547 aaPredicted RBP12.3□□□□□ -0.44
LRAT-201ENST00000336356 RBBP5Q15291 538 aaKnown RBP12.3□□□□□ -0.44
LRAT-201ENST00000336356 TRIM47Q96LD4 638 aa12.3□□□□□ -0.44
LRAT-201ENST00000336356 SAMD15Q9P1V8 674 aa12.3□□□□□ -0.44
LRAT-201ENST00000336356 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms