RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 NEDD9Q14511 834 aa23.31■■□□□ 1.32
SPNS1-203ENST00000334536 RILPL1Q5EBL4 403 aa23.31■■□□□ 1.32
SPNS1-203ENST00000334536 DOT1LQ8TEK3 1739 aa23.31■■□□□ 1.32
SPNS1-203ENST00000334536 VWA3AA6NCI4 1184 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 PRKAB2O43741 272 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 CRKLP46109 303 aaKnown RBP23.3■■□□□ 1.32
SPNS1-203ENST00000334536 CRACR2BQ8N4Y2 399 aaPredicted RBP23.3■■□□□ 1.32
SPNS1-203ENST00000334536 CEP112Q8N8E3 955 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 CTCFLQ8NI51 663 aaPredicted RBP23.3■■□□□ 1.32
SPNS1-203ENST00000334536 CLIC6Q96NY7 704 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 CDC5LQ99459 802 aaKnown RBP23.3■■□□□ 1.32
SPNS1-203ENST00000334536 ANAPC4Q9UJX5 808 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 LAMB2P55268 1798 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 ADAMTS2O95450 1211 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 NTSR2O95665 410 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 SRGAP1Q7Z6B7 1085 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 METTL16Q86W50 562 aaKnown RBP23.3■■□□□ 1.32
SPNS1-203ENST00000334536 DIS3L2Q8IYB7 885 aaKnown RBP23.3■■□□□ 1.32
SPNS1-203ENST00000334536 ZNF579Q8NAF0 562 aaKnown RBP23.3■■□□□ 1.32
SPNS1-203ENST00000334536 KAT2BQ92831 832 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 HSD3B7Q9H2F3 369 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 BSDC1Q9NW68 430 aaPredicted RBP23.3■■□□□ 1.32
SPNS1-203ENST00000334536 LRP2BPQ9P2M1 347 aa23.3■■□□□ 1.32
SPNS1-203ENST00000334536 PTPREP23469 700 aa23.29■■□□□ 1.32
SPNS1-203ENST00000334536 PNOCQ13519 176 aa23.29■■□□□ 1.32
SPNS1-203ENST00000334536 MAP9Q49MG5 647 aa23.29■■□□□ 1.32
SPNS1-203ENST00000334536 EPC1Q9H2F5 836 aa23.29■■□□□ 1.32
SPNS1-203ENST00000334536 SNAP23O00161 211 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 LMOD1P29536 600 aaPredicted RBP23.28■■□□□ 1.32
SPNS1-203ENST00000334536 AARSP49588 968 aaKnown RBP eCLIP23.28■■□□□ 1.32
SPNS1-203ENST00000334536 IRX1P78414 480 aaPredicted RBP23.28■■□□□ 1.32
SPNS1-203ENST00000334536 MCM6Q14566 821 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 LONRF3Q496Y0 759 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 RRP12Q5JTH9 1297 aaKnown RBP23.28■■□□□ 1.32
SPNS1-203ENST00000334536 KCNV1Q6PIU1 500 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 KIFC2Q96AC6 838 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 CEP131Q9UPN4 1083 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 CICQ96RK0 1608 aaPredicted RBP23.28■■□□□ 1.32
SPNS1-203ENST00000334536 BTBD18B2RXH4 712 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 CHRNDQ07001 517 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 PPARAQ07869 468 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 STK11IPQ8N1F8 1099 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 PRPF38AQ8NAV1 312 aaKnown RBP23.28■■□□□ 1.32
SPNS1-203ENST00000334536 AFAP1L1Q8TED9 768 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 MIEF2Q96C03 454 aa23.28■■□□□ 1.32
SPNS1-203ENST00000334536 SHOX2O60902 331 aaPredicted RBP23.27■■□□□ 1.32
SPNS1-203ENST00000334536 TOB1P50616 345 aaPredicted RBP23.27■■□□□ 1.32
SPNS1-203ENST00000334536 CHMP4BP1P59074 171 aa23.27■■□□□ 1.32
SPNS1-203ENST00000334536 MDM2Q00987 491 aaPredicted RBP23.27■■□□□ 1.32
SPNS1-203ENST00000334536 ZNF654Q8IZM8 581 aa23.27■■□□□ 1.32
SPNS1-203ENST00000334536 FANCBQ8NB91 859 aa23.27■■□□□ 1.32
SPNS1-203ENST00000334536 FBXO2Q9UK22 296 aaPredicted RBP23.27■■□□□ 1.32
SPNS1-203ENST00000334536 THRAP3Q9Y2W1 955 aaKnown RBP23.27■■□□□ 1.32
SPNS1-203ENST00000334536 NUTM2BA6NNL0 878 aaPredicted RBP23.26■■□□□ 1.31
SPNS1-203ENST00000334536 NUTM2EB1AL46 878 aaPredicted RBP23.26■■□□□ 1.31
SPNS1-203ENST00000334536 CYP7A1P22680 504 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 GUCY1A2P33402 732 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 UBASH3AP57075 661 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 SF3B2Q13435 895 aaKnown RBP23.26■■□□□ 1.31
SPNS1-203ENST00000334536 NUTM2AQ8IVF1 878 aaPredicted RBP23.26■■□□□ 1.31
SPNS1-203ENST00000334536 FMNL3Q8IVF7 1028 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 SGSM3Q96HU1 749 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 UBAC1Q9BSL1 405 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 PPP2R2CQ9Y2T4 447 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 PCDHA5Q9Y5H7 936 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 ZNF804BA4D1E1 1349 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 ISM2Q6H9L7 571 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 NIP7Q9Y221 180 aaKnown RBP eCLIP23.26■■□□□ 1.31
SPNS1-203ENST00000334536 BCL9LQ86UU0 1499 aa23.26■■□□□ 1.31
SPNS1-203ENST00000334536 LOC102724428A0A0B4J2F2 783 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 ELF1P32519 619 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 SIK1P57059 783 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 GNG11P61952 73 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 KANK3Q6NY19 840 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 ESR2Q92731 530 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 CABS1Q96KC9 395 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 RNF26Q9BY78 433 aaPredicted RBP23.25■■□□□ 1.31
SPNS1-203ENST00000334536 FAM204AQ9H8W3 233 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 ANKZF1Q9H8Y5 726 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 DACH1Q9UI36 760 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 UBE2Q2LH0YL09 131 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 SERPINC1P01008 464 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 CASP8Q14790 479 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 NT5DC1Q5TFE4 455 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 FOXP4Q8IVH2 680 aaPredicted RBP23.25■■□□□ 1.31
SPNS1-203ENST00000334536 KCNJ14Q9UNX9 436 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 ZNF652Q9Y2D9 606 aa23.25■■□□□ 1.31
SPNS1-203ENST00000334536 SRPRBQ9Y5M8 271 aaKnown RBP23.25■■□□□ 1.31
SPNS1-203ENST00000334536 MAGEB6P1A0A0J9YX57 407 aa23.24■■□□□ 1.31
SPNS1-203ENST00000334536 KLHL33A6NCF5 533 aa23.24■■□□□ 1.31
SPNS1-203ENST00000334536 EBAG9O00559 213 aa23.24■■□□□ 1.31
SPNS1-203ENST00000334536 ATP1A3P13637 1013 aa23.24■■□□□ 1.31
SPNS1-203ENST00000334536 SEC23AQ15436 765 aa23.24■■□□□ 1.31
SPNS1-203ENST00000334536 TRIML1Q8N9V2 468 aa23.24■■□□□ 1.31
SPNS1-203ENST00000334536 ZKSCAN3Q9BRR0 538 aa23.24■■□□□ 1.31
SPNS1-203ENST00000334536 MCM8Q9UJA3 840 aa23.24■■□□□ 1.31
SPNS1-203ENST00000334536 UBE4AQ14139 1066 aa23.23■■□□□ 1.31
SPNS1-203ENST00000334536 PPP2R5AQ15172 486 aa23.23■■□□□ 1.31
SPNS1-203ENST00000334536 VSTM4Q8IW00 320 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms