RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 LAMB2P55268 1798 aa14.01□□□□□ -0.17
VPS33B-201ENST00000333371 AKR1B15C9JRZ8 316 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-201ENST00000333371 TBC1D8O95759 1140 aa14.01□□□□□ -0.17
VPS33B-201ENST00000333371 FUT2Q10981 343 aa14.01□□□□□ -0.17
VPS33B-201ENST00000333371 CUL4BQ13620 913 aa14.01□□□□□ -0.17
VPS33B-201ENST00000333371 ELOA2Q8IYF1 753 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-201ENST00000333371 CDC5LQ99459 802 aaKnown RBP14.01□□□□□ -0.17
VPS33B-201ENST00000333371 ARGLU1Q9NWB6 273 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-201ENST00000333371 MAGEB6P1A0A0J9YX57 407 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 GNAT2P19087 354 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 CASP14P31944 242 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 KRT2P35908 639 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 PHF20Q9BVI0 1012 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 SRRTQ9BXP5 876 aaKnown RBP14□□□□□ -0.17
VPS33B-201ENST00000333371 PARD6BQ9BYG5 372 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 PUF60Q9UHX1 559 aaKnown RBP14□□□□□ -0.17
VPS33B-201ENST00000333371 CEP131Q9UPN4 1083 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 CTNND2Q9UQB3 1225 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 COL1A1P02452 1464 aaPredicted RBP14□□□□□ -0.17
VPS33B-201ENST00000333371 BCL9LQ86UU0 1499 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 RNF225M0QZC1 329 aaPredicted RBP14□□□□□ -0.17
VPS33B-201ENST00000333371 CC2D1AQ6P1N0 951 aaPredicted RBP14□□□□□ -0.17
VPS33B-201ENST00000333371 C3orf67Q6ZVT6 689 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 TRIML1Q8N9V2 468 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 ZNF384Q8TF68 577 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 ESR2Q92731 530 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 ZSCAN10Q96SZ4 725 aaPredicted RBP14□□□□□ -0.17
VPS33B-201ENST00000333371 RNF26Q9BY78 433 aaPredicted RBP14□□□□□ -0.17
VPS33B-201ENST00000333371 RNF41Q9H4P4 317 aaPredicted RBP14□□□□□ -0.17
VPS33B-201ENST00000333371 AATFQ9NY61 560 aaKnown RBP eCLIP14□□□□□ -0.17
VPS33B-201ENST00000333371 MAPK8IP1Q9UQF2 711 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 RTL9Q8NET4 1388 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 PPP1R3GB7ZBB8 358 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 FXR1P51114 621 aaKnown RBP eCLIP14□□□□□ -0.17
VPS33B-201ENST00000333371 NPY5RQ15761 445 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 IFIT1BQ5T764 474 aaKnown RBP14□□□□□ -0.17
VPS33B-201ENST00000333371 SPATA1Q5VX52 437 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 ACRBPQ8NEB7 543 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 ADD3Q9UEY8 706 aaKnown RBP14□□□□□ -0.17
VPS33B-201ENST00000333371 USP21Q9UK80 565 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 ADGRG1Q9Y653 693 aa14□□□□□ -0.17
VPS33B-201ENST00000333371 GYS2P54840 703 aa13.99□□□□□ -0.17
VPS33B-201ENST00000333371 PTGDRQ13258 359 aa13.99□□□□□ -0.17
VPS33B-201ENST00000333371 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
VPS33B-201ENST00000333371 RSRC2Q7L4I2 434 aaKnown RBP13.99□□□□□ -0.17
VPS33B-201ENST00000333371 TMTC2Q8N394 836 aa13.99□□□□□ -0.17
VPS33B-201ENST00000333371 CCDC175P0C221 793 aa13.99□□□□□ -0.17
VPS33B-201ENST00000333371 ERCC5P28715 1186 aaPredicted RBP13.99□□□□□ -0.17
VPS33B-201ENST00000333371 FAM47AQ5JRC9 791 aa13.99□□□□□ -0.17
VPS33B-201ENST00000333371 KANK3Q6NY19 840 aa13.99□□□□□ -0.17
VPS33B-201ENST00000333371 SMIM5Q71RC9 77 aa13.99□□□□□ -0.17
VPS33B-201ENST00000333371 SH3RF1Q7Z6J0 888 aa13.99□□□□□ -0.17
VPS33B-201ENST00000333371 ANKRD18AQ8IVF6 992 aa13.99□□□□□ -0.17
VPS33B-201ENST00000333371 RIOK1Q9BRS2 568 aaKnown RBP13.99□□□□□ -0.17
VPS33B-201ENST00000333371 XDHP47989 1333 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 ZBTB22O15209 634 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 ST5P78524 1137 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 CACNA1SQ13698 1873 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 PPFIBP1Q86W92 1011 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 MTRQ99707 1265 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 VPS16Q9H269 839 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 JAG2Q9Y219 1238 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 GYPCP04921 128 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 PBX1P40424 430 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 TROAPQ12815 778 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 IL17AQ16552 155 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 TTC38Q5R3I4 469 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 CDKAL1Q5VV42 579 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 PIK3AP1Q6ZUJ8 805 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 CNTNAP4Q9C0A0 1308 aa13.98□□□□□ -0.17
VPS33B-201ENST00000333371 GOLGA6L9A6NEM1 432 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 KLRK1P26718 216 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 MCM7P33993 719 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 ZNF569Q5MCW4 686 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 PTF1AQ7RTS3 328 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 CATIPQ7Z7H3 387 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 SRBD1Q8N5C6 995 aaKnown RBP13.97□□□□□ -0.17
VPS33B-201ENST00000333371 NEK11Q8NG66 645 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 ZNF831Q5JPB2 1677 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 DUOX1Q9NRD9 1551 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 USP17L21D6R901 530 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 MFAP3LO75121 409 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 GPR161Q8N6U8 529 aaKnown RBP13.97□□□□□ -0.17
VPS33B-201ENST00000333371 TNFRSF25Q93038 417 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 PANX2Q96RD6 677 aa13.97□□□□□ -0.17
VPS33B-201ENST00000333371 PRPF3O43395 683 aaKnown RBP13.96□□□□□ -0.17
VPS33B-201ENST00000333371 CYP2D6P10635 497 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 XBP1P17861 261 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 OAS2P29728 719 aaKnown RBP13.96□□□□□ -0.17
VPS33B-201ENST00000333371 RRAGBQ5VZM2 374 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 FNBP4Q8N3X1 1017 aaPredicted RBP13.96□□□□□ -0.17
VPS33B-201ENST00000333371 TAB2Q9NYJ8 693 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 GNPATO15228 680 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 ZPR1O75312 459 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 ERVK-24P63145 666 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 KRT31Q15323 416 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 FAM182BQ5T319 152 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.17
VPS33B-201ENST00000333371 TBC1D9BQ66K14 1250 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms