RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 KIAA1468Q9P260 1216 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 ELP1O95163 1332 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 AHDC1Q5TGY3 1603 aaPredicted RBP10.31□□□□□ -0.76
COPB2-201ENST00000333188 ECE2O60344 883 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 CCNT1O60563 726 aaKnown RBP10.31□□□□□ -0.76
COPB2-201ENST00000333188 TOB1P50616 345 aaPredicted RBP10.31□□□□□ -0.76
COPB2-201ENST00000333188 TPM4P67936 248 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 PRAMEF18Q5VWM3 479 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 ZNF287Q9HBT7 754 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 SALL1Q9NSC2 1324 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 PRR29P0C7W0 189 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 TXKP42681 527 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 RILPL1Q5EBL4 403 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 TMTC3Q6ZXV5 915 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 RTFDC1Q9BY42 306 aaPredicted RBP10.31□□□□□ -0.76
COPB2-201ENST00000333188 POLR3EQ9NVU0 708 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 TMEM260Q9NX78 707 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 ZKSCAN5Q9Y2L8 839 aa10.31□□□□□ -0.76
COPB2-201ENST00000333188 GLI3P10071 1580 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 PLEKHG2Q9H7P9 1386 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 SMCO2A6NFE2 343 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 YEATS4O95619 227 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 RASA1P20936 1047 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 UBE2SQ16763 222 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 FMR1NBQ8N0W7 255 aaPredicted RBP10.3□□□□□ -0.76
COPB2-201ENST00000333188 OGFOD1Q8N543 542 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
COPB2-201ENST00000333188 SERPINB13Q9UIV8 391 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 PYCARDQ9ULZ3 195 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 CRYBG1Q9Y4K1 1723 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 CRKP46108 304 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 KARSQ15046 597 aaKnown RBP10.3□□□□□ -0.76
COPB2-201ENST00000333188 FCHSD1Q86WN1 690 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 SMARCE1Q969G3 411 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 PPP1R9BQ96SB3 815 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 ADAMTS7Q9UKP4 1686 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 ABCA3Q99758 1704 aa10.3□□□□□ -0.76
COPB2-201ENST00000333188 UBA7P41226 1012 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 SP8Q8IXZ3 490 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 TBC1D22AQ8WUA7 517 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 PKD2L1Q9P0L9 805 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 MYO5AQ9Y4I1 1855 aaKnown RBP10.29□□□□□ -0.76
COPB2-201ENST00000333188 IDEP14735 1019 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 UBXN2AP68543 259 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 SLC15A2Q16348 729 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 CDC42EP5Q6NZY7 148 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 CALM1P0DP23 149 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 CALM2P0DP24 149 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 CALM3P0DP25 149 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 PLCG2P16885 1265 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 CMA1P23946 247 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 SLC1A4P43007 532 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 PKN1Q16512 942 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 AXDND1Q5T1B0 1012 aaPredicted RBP10.29□□□□□ -0.76
COPB2-201ENST00000333188 TYW1BQ6NUM6 668 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 RRP36Q96EU6 259 aaKnown RBP10.29□□□□□ -0.76
COPB2-201ENST00000333188 RNF26Q9BY78 433 aaPredicted RBP10.29□□□□□ -0.76
COPB2-201ENST00000333188 RBM28Q9NW13 759 aaKnown RBP10.29□□□□□ -0.76
COPB2-201ENST00000333188 FZD1Q9UP38 647 aa10.29□□□□□ -0.76
COPB2-201ENST00000333188 CTAGE5O15320 804 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 TECP42680 631 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 SEPT2Q15019 361 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 RCSD1Q6JBY9 416 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 BLIDQ8IZY5 108 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 CSRNP1Q96S65 589 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 COA1Q9GZY4 146 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 FANCLQ9NW38 375 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 TMOD2Q9NZR1 351 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 CEP131Q9UPN4 1083 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 PLCH1Q4KWH8 1693 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 EVCP57679 992 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 WWC2Q6AWC2 1192 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 NOC3LQ8WTT2 800 aaKnown RBP10.28□□□□□ -0.76
COPB2-201ENST00000333188 PCMTD1Q96MG8 357 aaPredicted RBP10.28□□□□□ -0.76
COPB2-201ENST00000333188 HOOK1Q9UJC3 728 aaKnown RBP10.28□□□□□ -0.76
COPB2-201ENST00000333188 DDTLA6NHG4 134 aaPredicted RBP10.28□□□□□ -0.76
COPB2-201ENST00000333188 CLCN1P35523 988 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 SLC30A10Q6XR72 485 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 SHANK3Q9BYB0 1731 aa10.28□□□□□ -0.76
COPB2-201ENST00000333188 XPO4Q9C0E2 1151 aaKnown RBP10.28□□□□□ -0.76
COPB2-201ENST00000333188 TJP1Q07157 1748 aa10.27□□□□□ -0.76
COPB2-201ENST00000333188 CCT6AP40227 531 aaKnown RBP10.27□□□□□ -0.77
COPB2-201ENST00000333188 BAG6P46379 1132 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 ZNF75DP51815 510 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 UBASH3AP57075 661 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 R3HDM1Q15032 1099 aaKnown RBP10.27□□□□□ -0.77
COPB2-201ENST00000333188 CERKLQ49MI3 558 aaPredicted RBP10.27□□□□□ -0.77
COPB2-201ENST00000333188 SHISA4Q96DD7 197 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 CDK5RAP3Q96JB5 506 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 PRMT6Q96LA8 375 aaPredicted RBP10.27□□□□□ -0.77
COPB2-201ENST00000333188 CRAMP1Q96RY5 1269 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 FEZ1Q99689 392 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 HOMER2Q9NSB8 354 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 LAMB4A4D0S4 1761 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 USP17L15C9J2P7 530 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 USP17L13C9JLJ4 530 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 USP17L11C9JVI0 530 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 USP17L18D6R9N7 530 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 USP17L22D6RA61 530 aa10.27□□□□□ -0.77
COPB2-201ENST00000333188 USP17L17D6RBQ6 530 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms