RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 CTR9Q6PD62 1173 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 IL17RAQ96F46 866 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 ASCC2Q9H1I8 757 aaPredicted RBP11.52□□□□□ -0.57
SYN3-201ENST00000332840 ARHGEF10LQ9HCE6 1279 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 HELLSQ9NRZ9 838 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 COLQQ9Y215 455 aaPredicted RBP11.52□□□□□ -0.57
SYN3-201ENST00000332840 ROBO3Q96MS0 1386 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 DOCK3Q8IZD9 2030 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 A0A0D9SFI3 127 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 USP17L15C9J2P7 530 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 USP17L13C9JLJ4 530 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 USP17L11C9JVI0 530 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 USP17L18D6R9N7 530 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 USP17L22D6RA61 530 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 USP17L17D6RBQ6 530 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 USP17L19D6RCP7 530 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 USP17L20D6RJB6 530 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 CHGBP05060 677 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 CYP2D6P10635 497 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 SLC4A3P48751 1232 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 CDK8P49336 464 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 ICA1Q05084 483 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 USP17L24Q0WX57 530 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 SLC9C1Q4G0N8 1177 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 LPAR1Q92633 364 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 ARMC5Q96C12 935 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 NAPBQ9H115 298 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 KANSL2Q9H9L4 492 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 MKNK2Q9HBH9 465 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 SRRDQ9UH36 339 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 CCDC171Q6TFL3 1326 aa11.51□□□□□ -0.57
SYN3-201ENST00000332840 DDX60LQ5H9U9 1706 aaKnown RBP11.5□□□□□ -0.57
SYN3-201ENST00000332840 M0R2C6 588 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 TNPO2O14787 897 aaKnown RBP11.5□□□□□ -0.57
SYN3-201ENST00000332840 SEPT2Q15019 361 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 ANKRD13CQ8N6S4 541 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 SLC44A5Q8NCS7 719 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 RAET1EQ8TD07 263 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 MAP4K1Q92918 833 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 COA7Q96BR5 231 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 DYNLL2Q96FJ2 89 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 TRIM47Q96LD4 638 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 MORF4L1Q9UBU8 362 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 MYH7P12883 1935 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 ALPK3Q96L96 1907 aa11.5□□□□□ -0.57
SYN3-201ENST00000332840 RANBP2P49792 3224 aaKnown RBP11.5□□□□□ -0.57
SYN3-201ENST00000332840 FOCADQ5VW36 1801 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 CYP2D7A0A087X1C5 515 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 MINDY4BA8MYZ0 360 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 ST18O60284 1047 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 VCAM1P19320 739 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 GUCY1A2P33402 732 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 HERVK_113P62684 666 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 CCNA1P78396 465 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 PTH1RQ03431 593 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 PDE4BQ07343 736 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 SHROOM1Q2M3G4 852 aaPredicted RBP11.49□□□□□ -0.57
SYN3-201ENST00000332840 CCAR1Q8IX12 1150 aaKnown RBP11.49□□□□□ -0.57
SYN3-201ENST00000332840 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 GPRC5AQ8NFJ5 357 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 ARHGAP39Q9C0H5 1083 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 EPB41L4AQ9HCS5 686 aaPredicted RBP11.49□□□□□ -0.57
SYN3-201ENST00000332840 TMX2Q9Y320 296 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 PTCH2Q9Y6C5 1203 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 MYPNQ86TC9 1320 aa11.49□□□□□ -0.57
SYN3-201ENST00000332840 AKR1B1P15121 316 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 MAPK4P31152 587 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 ZYXQ15942 572 aaKnown RBP11.48□□□□□ -0.57
SYN3-201ENST00000332840 RNF20Q5VTR2 975 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 ZNF444Q8N0Y2 327 aaPredicted RBP11.48□□□□□ -0.57
SYN3-201ENST00000332840 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 ACER1Q8TDN7 264 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 KCNB2Q92953 911 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 ZNF333Q96JL9 665 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 P2RX7Q99572 595 aaKnown RBP11.48□□□□□ -0.57
SYN3-201ENST00000332840 GOPCQ9HD26 462 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 HOXC10Q9NYD6 342 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 SYNPO2Q9UMS6 1093 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 RABGAP1Q9Y3P9 1069 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 RBM8AQ9Y5S9 174 aaKnown RBP11.48□□□□□ -0.57
SYN3-201ENST00000332840 SIPA1L1O43166 1804 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 COL6A3P12111 3177 aa11.48□□□□□ -0.57
SYN3-201ENST00000332840 NAV1Q8NEY1 1877 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 ZMYM6O95789 1325 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 H0YGN5 161 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 K7ELQ4 463 aaPredicted RBP11.47□□□□□ -0.57
SYN3-201ENST00000332840 WDR46O15213 610 aaKnown RBP11.47□□□□□ -0.57
SYN3-201ENST00000332840 ZKSCAN1P17029 563 aaPredicted RBP11.47□□□□□ -0.57
SYN3-201ENST00000332840 RASA1P20936 1047 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 MCM2P49736 904 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 EVX2Q03828 476 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 PRKCZQ05513 592 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 IRF5Q13568 498 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 NECTIN1Q15223 517 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 CATSPERGQ6ZRH7 1159 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 ZNF589Q86UQ0 364 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms