RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 TCHHQ07283 1943 aa11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 B4DLN1 442 aa11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 PCCAP05165 728 aaPredicted RBP11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 LDHBP07195 334 aaKnown RBP11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 HIBADHP31937 336 aaKnown RBP11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 GIGYF2Q6Y7W6 1299 aaKnown RBP11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 C8orf37Q96NL8 207 aa11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 ZBTB21Q9ULJ3 1066 aa11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 GNAT2P19087 354 aa11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 AMPD3Q01432 767 aa11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 FMR1Q06787 632 aaKnown RBP eCLIP11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 FCHSD1Q86WN1 690 aa11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 VSTM4Q8IW00 320 aa11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SMARCC2Q8TAQ2 1214 aa11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 STRBPQ96SI9 672 aaKnown RBP11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 KANSL2Q9H9L4 492 aa11.01□□□□□ -0.65
CSGALNACT1-201ENST00000332246 CEP170BQ9Y4F5 1589 aaPredicted RBP11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 PSDA5PKW4 1024 aaPredicted RBP11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 TCP10Q12799 353 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 CYP26C1Q6V0L0 522 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 RDH13Q8NBN7 331 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 DYDC1Q8WWB3 177 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 ZSCAN10Q96SZ4 725 aaPredicted RBP11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 HDAC6Q9UBN7 1215 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 MAGEA1P43355 309 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SLC7A5Q01650 507 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 TBC1D10BQ4KMP7 808 aaPredicted RBP11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 UHMK1Q8TAS1 419 aaKnown RBP11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 RAB34Q9BZG1 259 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 EFCAB8A8MWE9 144 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 CHMP2AO43633 222 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 HSF2BPO75031 334 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 USP17L8P0C7I0 530 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 KRT83P78385 493 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 EXOSC10Q01780 885 aaKnown RBP11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 FNBP4Q8N3X1 1017 aaPredicted RBP11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SAMM50Q9Y512 469 aa11□□□□□ -0.65
CSGALNACT1-201ENST00000332246 CALML3P27482 149 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 ANTXR2P58335 489 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 ZYXQ15942 572 aaKnown RBP10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SPATA1Q5VX52 437 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 KRT79Q5XKE5 535 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 METTL16Q86W50 562 aaKnown RBP10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 MB21D2Q8IYB1 491 aaPredicted RBP10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 TEX11Q8IYF3 940 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 GPR161Q8N6U8 529 aaKnown RBP10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 EPN1Q9Y6I3 576 aaPredicted RBP10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 RTL9Q8NET4 1388 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 NRXN1Q9ULB1 1477 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 MROH2AA6NES4 1674 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 MMP1P03956 469 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 GJC1P36383 396 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 TMTC1Q8IUR5 882 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 MARCH10Q8NA82 808 aaPredicted RBP10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SLC44A5Q8NCS7 719 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 OR8K1Q8NGG5 319 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 HPS3Q969F9 1004 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 VWDEQ8N2E2 1590 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 USP17L3A6NCW0 530 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 USP17L4A6NCW7 530 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 PLCD1P51178 756 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 ST5P78524 1137 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SUSD4Q5VX71 490 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 USP17L1Q7RTZ2 530 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 NBPF11Q86T75 865 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 CCDC25Q86WR0 208 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 LRRC47Q8N1G4 583 aaKnown RBP10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 PNMA1Q8ND90 353 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 RASSF4Q9H2L5 321 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 ABCB6Q9NP58 842 aa10.99□□□□□ -0.65
CSGALNACT1-201ENST00000332246 MROH7-TTC4A0A0A0MT08 1334 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SMIM22K7EJ46 135 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 STX10O60499 249 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 BMP15O95972 392 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SP4Q02446 784 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 CUL4BQ13620 913 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 NAA35Q5VZE5 725 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 C6orf50Q9HD87 102 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 TRIM10Q9UDY6 481 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 MYO6Q9UM54 1294 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SAR1BQ9Y6B6 198 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 MAP3K15Q6ZN16 1313 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 UBN2Q6ZU65 1347 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 COPB1P53618 953 aaKnown RBP10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 HERC4Q5GLZ8 1057 aaPredicted RBP10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 CABP7Q86V35 215 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SYCP3Q8IZU3 236 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SLAIN2Q9P270 581 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 TTF2Q9UNY4 1162 aaKnown RBP10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 PIK3C2BO00750 1634 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 FRMPD1Q5SYB0 1578 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 EBAG9O00559 213 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 RFX5P48382 616 aaPredicted RBP10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 UBE3CQ15386 1083 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 CEP57Q86XR8 500 aa10.98□□□□□ -0.65
CSGALNACT1-201ENST00000332246 SNX29Q8TEQ0 813 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms