RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 CHP1Q99653 195 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 CNNM2Q9H8M5 875 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 RIPOR2Q9Y4F9 1068 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 TCRBV5S4A2TA0A5A2 114 aa16.3■□□□□ 0.2
SNX20-202ENST00000330943 CORO7P57737 925 aa16.3■□□□□ 0.2
SNX20-202ENST00000330943 SART3Q15020 963 aaKnown RBP16.3■□□□□ 0.2
SNX20-202ENST00000330943 COPB1P53618 953 aaKnown RBP16.3■□□□□ 0.2
SNX20-202ENST00000330943 USP14P54578 494 aa16.3■□□□□ 0.2
SNX20-202ENST00000330943 EVA1CP58658 441 aa16.3■□□□□ 0.2
SNX20-202ENST00000330943 ICE2Q659A1 982 aa16.3■□□□□ 0.2
SNX20-202ENST00000330943 RIN2Q8WYP3 895 aaPredicted RBP16.3■□□□□ 0.2
SNX20-202ENST00000330943 KRT23Q9C075 422 aa16.3■□□□□ 0.2
SNX20-202ENST00000330943 BLZF1Q9H2G9 400 aa16.3■□□□□ 0.2
SNX20-202ENST00000330943 ARMT1Q9H993 441 aa16.3■□□□□ 0.2
SNX20-202ENST00000330943 ERICH2A1L162 156 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 PATL2C9JE40 543 aaKnown RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 PPFIA4O75335 1185 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 GTF2A1P52655 376 aaPredicted RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 EARS2Q5JPH6 523 aaKnown RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 RRAGBQ5VZM2 374 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 CTCFLQ8NI51 663 aaPredicted RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 PPM1EQ8WY54 764 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 VIPAS39Q9H9C1 493 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 VPS54Q9P1Q0 977 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 LIMA1Q9UHB6 759 aaKnown RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 LRP6O75581 1613 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 PARP4Q9UKK3 1724 aaKnown RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 ITGA6P23229 1130 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 ALX1Q15699 326 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 TRAPPC11Q7Z392 1133 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 CAPZA3Q96KX2 299 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 MMS19Q96T76 1030 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 GREM2Q9H772 168 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 HPCAL4Q9UM19 191 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 REXO2Q9Y3B8 237 aaKnown RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 EPN1Q9Y6I3 576 aaPredicted RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 CHD4Q14839 1912 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 CCDC196A0A1B0GTZ2 297 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 SRGAP2O75044 1071 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 ZMYND10O75800 440 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 PRPF6O94906 941 aaKnown RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 NDUFA10O95299 355 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 PCCAP05165 728 aaPredicted RBP16.29■□□□□ 0.2
SNX20-202ENST00000330943 CSF1RP07333 972 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 AARSP49588 968 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNX20-202ENST00000330943 MAP9Q49MG5 647 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 NID2Q14112 1375 aa16.29■□□□□ 0.2
SNX20-202ENST00000330943 SPATA31A3Q5VYP0 1347 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 ZNF654Q8IZM8 581 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 MAGEB6Q8N7X4 407 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 FANCBQ8NB91 859 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 ANKRD20A12PQ8NF67 263 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 TTLL11Q8NHH1 800 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
SNX20-202ENST00000330943 SHISA4Q96DD7 197 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 SLAIN2Q9P270 581 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 hCG_1642624A0A1W2PR95 340 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 WNT7AO00755 349 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 PRKAB2O43741 272 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 ATP1A1P05023 1023 aaKnown RBP16.28■□□□□ 0.2
SNX20-202ENST00000330943 TDO2P48775 406 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
SNX20-202ENST00000330943 TRIM14Q14142 442 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 GSPT2Q8IYD1 628 aaKnown RBP16.28■□□□□ 0.2
SNX20-202ENST00000330943 JRKLQ9Y4A0 524 aa16.28■□□□□ 0.2
SNX20-202ENST00000330943 KCNJ18B7U540 433 aa16.27■□□□□ 0.2
SNX20-202ENST00000330943 UBXN1Q04323 297 aa16.27■□□□□ 0.2
SNX20-202ENST00000330943 STIM1Q13586 685 aa16.27■□□□□ 0.2
SNX20-202ENST00000330943 KCNJ12Q14500 433 aa16.27■□□□□ 0.2
SNX20-202ENST00000330943 ZNF512BQ96KM6 892 aaPredicted RBP16.27■□□□□ 0.2
SNX20-202ENST00000330943 PRDM1O75626 825 aa16.27■□□□□ 0.19
SNX20-202ENST00000330943 PAK1Q13153 545 aa16.27■□□□□ 0.19
SNX20-202ENST00000330943 ZNF174Q15697 407 aa16.27■□□□□ 0.19
SNX20-202ENST00000330943 TCP11X2Q5H9J9 407 aa16.27■□□□□ 0.19
SNX20-202ENST00000330943 MAPK8IP1Q9UQF2 711 aa16.27■□□□□ 0.19
SNX20-202ENST00000330943 SAR1BQ9Y6B6 198 aa16.27■□□□□ 0.19
SNX20-202ENST00000330943 XDHP47989 1333 aa16.27■□□□□ 0.19
SNX20-202ENST00000330943 STRCP1A6NGW2 1772 aa16.27■□□□□ 0.19
SNX20-202ENST00000330943 PES1O00541 588 aaKnown RBP16.26■□□□□ 0.19
SNX20-202ENST00000330943 MCM3P25205 808 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 SPAG1Q07617 926 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 ZBTB38Q8NAP3 1195 aaPredicted RBP16.26■□□□□ 0.19
SNX20-202ENST00000330943 COG1Q8WTW3 980 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 LRRC10BA6NIK2 292 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 GSG1L2A8MUP6 293 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 PSMD14O00487 310 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 KRT2P35908 639 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 GGCXP38435 758 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 DNAJC21Q5F1R6 531 aaKnown RBP16.26■□□□□ 0.19
SNX20-202ENST00000330943 CCDC122Q5T0U0 273 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 NELFBQ8WX92 580 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 FERMT2Q96AC1 680 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 PLA2G12BQ9BX93 195 aa16.26■□□□□ 0.19
SNX20-202ENST00000330943 XBP1P17861 261 aa16.25■□□□□ 0.19
SNX20-202ENST00000330943 GPTP24298 496 aa16.25■□□□□ 0.19
SNX20-202ENST00000330943 VGLL2Q8N8G2 317 aa16.25■□□□□ 0.19
SNX20-202ENST00000330943 HAUS4Q9H6D7 363 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms