RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TRIM58Q8NG06 486 aa15.64■□□□□ 0.09
EPHB3-201ENST00000330394 ENOX1Q8TC92 643 aaKnown RBP15.64■□□□□ 0.09
EPHB3-201ENST00000330394 C6orf50Q9HD87 102 aa15.64■□□□□ 0.09
EPHB3-201ENST00000330394 SDR42E1Q8WUS8 393 aa15.64■□□□□ 0.09
EPHB3-201ENST00000330394 EFCC1Q9HA90 598 aa15.64■□□□□ 0.09
EPHB3-201ENST00000330394 PCDHB6Q9Y5E3 794 aa15.64■□□□□ 0.09
EPHB3-201ENST00000330394 PPP6R2O75170 966 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 PDE6AP16499 860 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 CTNNA1P35221 906 aaKnown RBP15.63■□□□□ 0.09
EPHB3-201ENST00000330394 CETN1Q12798 172 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 FAM47AQ5JRC9 791 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 LMBR1Q8WVP7 490 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 LRRC45Q96CN5 670 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 TBC1D31Q96DN5 1066 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 TEX13AQ9BXU3 409 aaPredicted RBP15.63■□□□□ 0.09
EPHB3-201ENST00000330394 PUS7LQ9H0K6 701 aaKnown RBP15.63■□□□□ 0.09
EPHB3-201ENST00000330394 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.63■□□□□ 0.09
EPHB3-201ENST00000330394 ZNF652Q9Y2D9 606 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 B4DLN1 442 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 TEX33O43247 280 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 CCNT1O60563 726 aaKnown RBP15.63■□□□□ 0.09
EPHB3-201ENST00000330394 MAGEA9P43362 315 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 RUFY4Q6ZNE9 571 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 ADAT2Q7Z6V5 191 aaKnown RBP15.63■□□□□ 0.09
EPHB3-201ENST00000330394 PPFIA4O75335 1185 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 KLHL30Q0D2K2 578 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 HOOK3Q86VS8 718 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 MRRFQ96E11 262 aaKnown RBP15.63■□□□□ 0.09
EPHB3-201ENST00000330394 LRRC27Q9C0I9 530 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 POLD4Q9HCU8 107 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 RASAL2Q9UJF2 1139 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 IGSF1Q8N6C5 1336 aa15.63■□□□□ 0.09
EPHB3-201ENST00000330394 CLTAP09496 248 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 CTNNA2P26232 953 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 ERCC5P28715 1186 aaPredicted RBP15.62■□□□□ 0.09
EPHB3-201ENST00000330394 IFNL3Q8IZI9 196 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 CCDC26Q8TAB7 109 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 MGARPQ8TDB4 240 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 PPP1R12CQ9BZL4 782 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 BAG3O95817 575 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 RPS6KA1Q15418 735 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 DZIP3Q86Y13 1208 aaKnown RBP15.62■□□□□ 0.09
EPHB3-201ENST00000330394 NIP7Q9Y221 180 aaKnown RBP eCLIP15.62■□□□□ 0.09
EPHB3-201ENST00000330394 A6NNZ2 444 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 CCDC172P0C7W6 258 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 DNM2P50570 870 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 ZBTB16Q05516 673 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 TUBB8Q3ZCM7 444 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 SUGCTQ9HAC7 445 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 STK38LQ9Y2H1 464 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 HYOU1Q9Y4L1 999 aa15.62■□□□□ 0.09
EPHB3-201ENST00000330394 KCNK3O14649 394 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 PDCLQ13371 301 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 SIRT1Q96EB6 747 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 DPH5Q9H2P9 285 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 PLS1Q14651 629 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 TBC1D5Q92609 795 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 RBM28Q9NW13 759 aaKnown RBP15.61■□□□□ 0.09
EPHB3-201ENST00000330394 RIPOR2Q9Y4F9 1068 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 EHHADHQ08426 723 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 CNNM4Q6P4Q7 775 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 MTRF1LQ9UGC7 380 aaKnown RBP15.61■□□□□ 0.09
EPHB3-201ENST00000330394 ATP10DQ9P241 1426 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 TNKSO95271 1327 aa15.61■□□□□ 0.09
EPHB3-201ENST00000330394 PCK1P35558 622 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 LACTBP83111 547 aaPredicted RBP15.6■□□□□ 0.09
EPHB3-201ENST00000330394 NAA35Q5VZE5 725 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 FEZ2Q9UHY8 353 aaPredicted RBP15.6■□□□□ 0.09
EPHB3-201ENST00000330394 MED14O60244 1454 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 GOLGA8KD6RF30 607 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 H7C1D1 291 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 NDUFA10O95299 355 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 VSNL1P62760 191 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 CACNA2D3Q8IZS8 1091 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 EPB41L5Q9HCM4 733 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 CPSF1Q10570 1443 aaKnown RBP15.6■□□□□ 0.09
EPHB3-201ENST00000330394 RPN1P04843 607 aaKnown RBP15.6■□□□□ 0.09
EPHB3-201ENST00000330394 RASSF7Q02833 373 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 TADA2BQ86TJ2 420 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 CCDC84Q86UT8 332 aaPredicted RBP15.6■□□□□ 0.09
EPHB3-201ENST00000330394 CCDC170Q8IYT3 715 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 GSDMAQ96QA5 445 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 TUBGCP2Q9BSJ2 902 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 FUCA2Q9BTY2 467 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 SLC39A2Q9NP94 309 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 HDAC6Q9UBN7 1215 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 TCP1P17987 556 aaKnown RBP15.6■□□□□ 0.09
EPHB3-201ENST00000330394 CALCOCO2Q13137 446 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 NYAP1Q6ZVC0 841 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 STOX1Q6ZVD7 989 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 SPATA5Q8NB90 893 aa15.6■□□□□ 0.09
EPHB3-201ENST00000330394 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.6■□□□□ 0.09
EPHB3-201ENST00000330394 PARP1P09874 1014 aaKnown RBP15.59■□□□□ 0.09
EPHB3-201ENST00000330394 GNA11P29992 359 aa15.59■□□□□ 0.09
EPHB3-201ENST00000330394 PUM3Q15397 648 aaKnown RBP15.59■□□□□ 0.09
EPHB3-201ENST00000330394 HERC4Q5GLZ8 1057 aaPredicted RBP15.59■□□□□ 0.09
EPHB3-201ENST00000330394 CABP7Q86V35 215 aa15.59■□□□□ 0.09
EPHB3-201ENST00000330394 RIN2Q8WYP3 895 aaPredicted RBP15.59■□□□□ 0.09
EPHB3-201ENST00000330394 KRT12Q99456 494 aa15.59■□□□□ 0.09
EPHB3-201ENST00000330394 F8W031 263 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms