RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PAGE5Q96GU1 130 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 RIOK1Q9BRS2 568 aaKnown RBP17.48■□□□□ 0.39
BRCC3-201ENST00000330045 GNL3LQ9NVN8 582 aaKnown RBP17.48■□□□□ 0.39
BRCC3-201ENST00000330045 ZNF804BA4D1E1 1349 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 ZNF831Q5JPB2 1677 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 AKR1B15C9JRZ8 316 aaPredicted RBP17.47■□□□□ 0.39
BRCC3-201ENST00000330045 TRIM37O94972 964 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 PLEKHA8P1O95397 391 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 GYG1P46976 350 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 MAP3K9P80192 1104 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 FAM196AQ6ZSG2 479 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 CDC5LQ99459 802 aaKnown RBP17.47■□□□□ 0.39
BRCC3-201ENST00000330045 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
BRCC3-201ENST00000330045 ZNF652Q9Y2D9 606 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 KLHL10Q6JEL2 608 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 TMCO3Q6UWJ1 677 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 IQCA1Q86XH1 822 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 BRMS1Q9HCU9 246 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 CACNA1SQ13698 1873 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 A0A1B0GUL6 1792 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 DUOX1Q9NRD9 1551 aa17.47■□□□□ 0.39
BRCC3-201ENST00000330045 SYNRGQ9UMZ2 1314 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 TEX33O43247 280 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 CD44P16070 742 aaKnown RBP17.46■□□□□ 0.39
BRCC3-201ENST00000330045 CLEC4GQ6UXB4 293 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 APTXQ7Z2E3 356 aaKnown RBP17.46■□□□□ 0.39
BRCC3-201ENST00000330045 GSDMAQ96QA5 445 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 PANX2Q96RD6 677 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 RTCBQ9Y3I0 505 aaKnown RBP17.46■□□□□ 0.39
BRCC3-201ENST00000330045 BRWD3Q6RI45 1802 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 MYH2Q9UKX2 1941 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 CYP2D7A0A087X1C5 515 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 ZRANB2O95218 330 aaKnown RBP eCLIP17.46■□□□□ 0.39
BRCC3-201ENST00000330045 PNMA6AP0CW24 399 aaPredicted RBP17.46■□□□□ 0.39
BRCC3-201ENST00000330045 CALM1P0DP23 149 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 CALM2P0DP24 149 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 CALM3P0DP25 149 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 CASP1P29466 404 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 STX17P56962 302 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 DYNLL1P63167 89 aaKnown RBP17.46■□□□□ 0.39
BRCC3-201ENST00000330045 CUL4BQ13620 913 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 DESI2Q9BSY9 194 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 BRIP1Q9BX63 1249 aa17.46■□□□□ 0.39
BRCC3-201ENST00000330045 TROAPQ12815 778 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 DPYDQ12882 1025 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 ZNF174Q15697 407 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 RC3H1Q5TC82 1133 aaKnown RBP17.45■□□□□ 0.38
BRCC3-201ENST00000330045 ST7Q9NRC1 585 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 MRFAP1Q9Y605 127 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 COL1A1P02452 1464 aaPredicted RBP17.45■□□□□ 0.38
BRCC3-201ENST00000330045 LY75O60449 1722 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 WNT7AO00755 349 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 PPFIBP1Q86W92 1011 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 IGSF22Q8N9C0 903 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 KIFC2Q96AC6 838 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 CTAGE1Q96RT6 745 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 DLEC1Q9Y238 1755 aa17.45■□□□□ 0.38
BRCC3-201ENST00000330045 CCDC175P0C221 793 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 PCP11498 1178 aaKnown RBP17.44■□□□□ 0.38
BRCC3-201ENST00000330045 PPP2R3AQ06190 1150 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 UBE4AQ14139 1066 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 MTF1Q14872 753 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 CDKAL1Q5VV42 579 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 KRT27Q7Z3Y8 459 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 ADD3Q9UEY8 706 aaKnown RBP17.44■□□□□ 0.38
BRCC3-201ENST00000330045 SCN7AQ01118 1682 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 SOWAHDA6NJG2 315 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 ZPR1O75312 459 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 FGRP09769 529 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 RBL2Q08999 1139 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 KARSQ15046 597 aaKnown RBP17.44■□□□□ 0.38
BRCC3-201ENST00000330045 CAVIN4Q5BKX8 364 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 TTC38Q5R3I4 469 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 ANKRD18AQ8IVF6 992 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 TNFRSF25Q93038 417 aa17.44■□□□□ 0.38
BRCC3-201ENST00000330045 NAA15Q9BXJ9 866 aaKnown RBP17.44■□□□□ 0.38
BRCC3-201ENST00000330045 PPP1R3GB7ZBB8 358 aa17.43■□□□□ 0.38
BRCC3-201ENST00000330045 SEMA3EO15041 775 aa17.43■□□□□ 0.38
BRCC3-201ENST00000330045 DDAH1O94760 285 aa17.43■□□□□ 0.38
BRCC3-201ENST00000330045 GTF2E1P29083 439 aaPredicted RBP17.43■□□□□ 0.38
BRCC3-201ENST00000330045 PBX1P40424 430 aa17.43■□□□□ 0.38
BRCC3-201ENST00000330045 PTGDRQ13258 359 aa17.43■□□□□ 0.38
BRCC3-201ENST00000330045 NPY5RQ15761 445 aa17.43■□□□□ 0.38
BRCC3-201ENST00000330045 FILIP1LQ4L180 1135 aa17.43■□□□□ 0.38
BRCC3-201ENST00000330045 NOM1Q5C9Z4 860 aaKnown RBP17.43■□□□□ 0.38
BRCC3-201ENST00000330045 CTR9Q6PD62 1173 aa17.43■□□□□ 0.38
BRCC3-201ENST00000330045 TMTC3Q6ZXV5 915 aa17.43■□□□□ 0.38
BRCC3-201ENST00000330045 SMYD4Q8IYR2 804 aaPredicted RBP17.43■□□□□ 0.38
BRCC3-201ENST00000330045 MRPL44Q9H9J2 332 aaKnown RBP17.43■□□□□ 0.38
BRCC3-201ENST00000330045 BAZ2AQ9UIF9 1905 aaKnown RBP17.43■□□□□ 0.38
BRCC3-201ENST00000330045 ATP2C1P98194 919 aaPredicted RBP17.43■□□□□ 0.38
BRCC3-201ENST00000330045 GPR161Q8N6U8 529 aaKnown RBP17.43■□□□□ 0.38
BRCC3-201ENST00000330045 CPLX3Q8WVH0 158 aa17.43■□□□□ 0.38
BRCC3-201ENST00000330045 PLA2G4AP47712 749 aa17.42■□□□□ 0.38
BRCC3-201ENST00000330045 CCDC12Q8WUD4 166 aaPredicted RBP17.42■□□□□ 0.38
BRCC3-201ENST00000330045 CELF1Q92879 486 aaKnown RBP17.42■□□□□ 0.38
BRCC3-201ENST00000330045 USP17L12C9JPN9 530 aa17.42■□□□□ 0.38
BRCC3-201ENST00000330045 USP17L21D6R901 530 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms