RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 MYH4Q9Y623 1939 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 SLC4A4Q9Y6R1 1079 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 ROBO3Q96MS0 1386 aa16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 PEX10O60683 326 aa16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 TFRCP02786 760 aaKnown RBP16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 AKR1B1P15121 316 aa16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 CYP2B6P20813 491 aa16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 COG2Q14746 738 aa16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 LRRFIP1Q32MZ4 808 aaKnown RBP16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 SIAH1Q8IUQ4 282 aa16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 CCAR1Q8IX12 1150 aaKnown RBP16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
GTF3C6-201ENST00000329970 SLC15A5A6NIM6 579 aa16.3■□□□□ 0.2
GTF3C6-201ENST00000329970 ERC2O15083 957 aa16.3■□□□□ 0.2
GTF3C6-201ENST00000329970 HOXC6P09630 235 aa16.3■□□□□ 0.2
GTF3C6-201ENST00000329970 ICA1Q05084 483 aa16.3■□□□□ 0.2
GTF3C6-201ENST00000329970 MAP2K5Q13163 448 aa16.3■□□□□ 0.2
GTF3C6-201ENST00000329970 MB21D1Q8N884 522 aa16.3■□□□□ 0.2
GTF3C6-201ENST00000329970 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
GTF3C6-201ENST00000329970 BTBD7Q9P203 1132 aa16.3■□□□□ 0.2
GTF3C6-201ENST00000329970 TRIOBPQ9H2D6 2365 aa16.3■□□□□ 0.2
GTF3C6-201ENST00000329970 GSG1L2A8MUP6 293 aa16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 RNF113AO15541 343 aaKnown RBP16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 ZKSCAN1P17029 563 aaPredicted RBP16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 GNAT2P19087 354 aa16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 PTPREP23469 700 aa16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 TRIM32Q13049 653 aa16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 GRB14Q14449 540 aa16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 SHCBP1Q8NEM2 672 aa16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 DPF3Q92784 378 aa16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 OSBP2Q969R2 916 aa16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 KANSL2Q9H9L4 492 aa16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 PCDH10Q9P2E7 1040 aa16.29■□□□□ 0.2
GTF3C6-201ENST00000329970 CYP2D7A0A087X1C5 515 aa16.28■□□□□ 0.2
GTF3C6-201ENST00000329970 H0YGN5 161 aa16.28■□□□□ 0.2
GTF3C6-201ENST00000329970 WDR46O15213 610 aaKnown RBP16.28■□□□□ 0.2
GTF3C6-201ENST00000329970 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
GTF3C6-201ENST00000329970 DSG3P32926 999 aa16.28■□□□□ 0.2
GTF3C6-201ENST00000329970 PI4K2BQ8TCG2 481 aa16.28■□□□□ 0.2
GTF3C6-201ENST00000329970 OGDHLQ9ULD0 1010 aa16.28■□□□□ 0.2
GTF3C6-201ENST00000329970 PLXNA1Q9UIW2 1896 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 SALL3Q9BXA9 1300 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 SMIM22K7EJ46 135 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 GPAA1O43292 621 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 STRNO43815 780 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 IGHA2P01877 340 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 CACNB2Q08289 660 aaPredicted RBP16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 KIAA1755Q5JYT7 1200 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 NECAB2Q7Z6G3 386 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 ADAMTS5Q9UNA0 930 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 NR2E3Q9Y5X4 410 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 IVNS1ABPQ9Y6Y0 642 aa16.27■□□□□ 0.2
GTF3C6-201ENST00000329970 RANBP2P49792 3224 aaKnown RBP16.26■□□□□ 0.19
GTF3C6-201ENST00000329970 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
GTF3C6-201ENST00000329970 AAMPQ13685 434 aa16.26■□□□□ 0.19
GTF3C6-201ENST00000329970 TSHZ3Q63HK5 1081 aa16.26■□□□□ 0.19
GTF3C6-201ENST00000329970 PAWRQ96IZ0 340 aaKnown RBP16.26■□□□□ 0.19
GTF3C6-201ENST00000329970 SPATC1LQ9H0A9 340 aa16.26■□□□□ 0.19
GTF3C6-201ENST00000329970 COLQQ9Y215 455 aaPredicted RBP16.26■□□□□ 0.19
GTF3C6-201ENST00000329970 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 MX1P20591 662 aa16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 RASA1P20936 1047 aa16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 HDAC1Q13547 482 aaPredicted RBP16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 CCL14Q16627 93 aa16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 CLEC10AQ8IUN9 316 aa16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 ABRAQ8N0Z2 381 aa16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 ZNF287Q9HBT7 754 aa16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 EPB41L4AQ9HCS5 686 aaPredicted RBP16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
GTF3C6-201ENST00000329970 PATL2C9JE40 543 aaKnown RBP16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 FLOT1O75955 427 aa16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 MFSD14CQ5VZR4 134 aa16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 TICAM2Q86XR7 235 aa16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 DIS3LQ8TF46 1054 aaKnown RBP16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 NBPF3Q9H094 633 aa16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 PRO3102Q9H379 93 aa16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 MROH8Q9H579 483 aa16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 NYAP2Q9P242 653 aa16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 SYNPO2Q9UMS6 1093 aa16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 PLIN4Q96Q06 1357 aa16.24■□□□□ 0.19
GTF3C6-201ENST00000329970 M0R2C6 588 aa16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 EVI5O60447 810 aa16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 MSCO60682 206 aa16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 SLC25A27O95847 323 aa16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 FXR1P51114 621 aaKnown RBP eCLIP16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 ZMYM1Q5SVZ6 1142 aa16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 WDR78Q5VTH9 848 aa16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 OLFML2BQ68BL8 750 aa16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 LHX8Q68G74 356 aa16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 SPICE1Q8N0Z3 855 aa16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 FLRT1Q9NZU1 646 aa16.23■□□□□ 0.19
GTF3C6-201ENST00000329970 IGKV6D-41A0A0C4DH26 115 aa16.22■□□□□ 0.19
GTF3C6-201ENST00000329970 COL6A1P12109 1028 aa16.22■□□□□ 0.19
GTF3C6-201ENST00000329970 ERCC3P19447 782 aa16.22■□□□□ 0.19
GTF3C6-201ENST00000329970 CCND3P30281 292 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms