RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 USP49Q70CQ1 688 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 STAG2Q8N3U4 1231 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 IGSF22Q8N9C0 903 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.1■□□□□ 0.49
SYNM-201ENST00000328642 PDCL3Q9H2J4 239 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 PXDNLA1KZ92 1463 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 SPATA31A5Q5VU36 1347 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 SPATA31A7Q8IWB4 1347 aa18.1■□□□□ 0.49
SYNM-201ENST00000328642 LIFRP42702 1097 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 TXNRD1Q16881 649 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 HS1BP3Q53T59 392 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 CCDC150Q8NCX0 1101 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 LRWD1Q9UFC0 647 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 LEMD3Q9Y2U8 911 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 COL5A2P05997 1499 aaPredicted RBP18.09■□□□□ 0.49
SYNM-201ENST00000328642 SORBS3O60504 671 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 WDHD1O75717 1129 aaPredicted RBP18.09■□□□□ 0.49
SYNM-201ENST00000328642 ADGRA1Q86SQ6 560 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 GUCA1BQ9UMX6 200 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 DLG5Q8TDM6 1919 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 POLR3GO15318 223 aaPredicted RBP18.09■□□□□ 0.49
SYNM-201ENST00000328642 AKR1B10O60218 316 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 MIGA2Q7L4E1 593 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 NLGN1Q8N2Q7 840 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 SNX29Q8TEQ0 813 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 PLA2G12BQ9BX93 195 aa18.09■□□□□ 0.49
SYNM-201ENST00000328642 PUF60Q9UHX1 559 aaKnown RBP18.09■□□□□ 0.49
SYNM-201ENST00000328642 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
SYNM-201ENST00000328642 C21orf2O43822 256 aa18.08■□□□□ 0.49
SYNM-201ENST00000328642 NEMFO60524 1076 aa18.08■□□□□ 0.49
SYNM-201ENST00000328642 CCDC181Q5TID7 509 aa18.08■□□□□ 0.49
SYNM-201ENST00000328642 POLR3EQ9NVU0 708 aa18.08■□□□□ 0.49
SYNM-201ENST00000328642 REREQ9P2R6 1566 aa18.08■□□□□ 0.49
SYNM-201ENST00000328642 CHRNA5P30532 468 aa18.08■□□□□ 0.49
SYNM-201ENST00000328642 TSGA10IPQ3SY00 556 aa18.08■□□□□ 0.49
SYNM-201ENST00000328642 TSG101Q99816 390 aa18.08■□□□□ 0.49
SYNM-201ENST00000328642 HDAC9Q9UKV0 1011 aa18.08■□□□□ 0.49
SYNM-201ENST00000328642 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.48
SYNM-201ENST00000328642 SPA17Q15506 151 aa18.08■□□□□ 0.48
SYNM-201ENST00000328642 KIFC2Q96AC6 838 aa18.08■□□□□ 0.48
SYNM-201ENST00000328642 CAMTA1Q9Y6Y1 1673 aa18.07■□□□□ 0.48
SYNM-201ENST00000328642 IGDCC4Q8TDY8 1250 aa18.07■□□□□ 0.48
SYNM-201ENST00000328642 TBC1D22AQ8WUA7 517 aa18.07■□□□□ 0.48
SYNM-201ENST00000328642 NSUN4Q96CB9 384 aaKnown RBP18.07■□□□□ 0.48
SYNM-201ENST00000328642 BCS1LQ9Y276 419 aa18.07■□□□□ 0.48
SYNM-201ENST00000328642 ALDH1B1P30837 517 aa18.07■□□□□ 0.48
SYNM-201ENST00000328642 PRR5LQ6MZQ0 368 aa18.07■□□□□ 0.48
SYNM-201ENST00000328642 CDK8P49336 464 aa18.07■□□□□ 0.48
SYNM-201ENST00000328642 MRPL12P52815 198 aaKnown RBP18.07■□□□□ 0.48
SYNM-201ENST00000328642 WWC2Q6AWC2 1192 aa18.07■□□□□ 0.48
SYNM-201ENST00000328642 ZNF397Q8NF99 534 aaPredicted RBP18.07■□□□□ 0.48
SYNM-201ENST00000328642 BAG1Q99933 345 aaPredicted RBP18.07■□□□□ 0.48
SYNM-201ENST00000328642 PIK3C2AO00443 1686 aa18.07■□□□□ 0.48
SYNM-201ENST00000328642 SYNRGQ9UMZ2 1314 aa18.07■□□□□ 0.48
SYNM-201ENST00000328642 TBC1D10BQ4KMP7 808 aaPredicted RBP18.06■□□□□ 0.48
SYNM-201ENST00000328642 CLEC17AQ6ZS10 378 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 SAMSN1Q9NSI8 373 aaKnown RBP18.06■□□□□ 0.48
SYNM-201ENST00000328642 ERICH4A6NGS2 130 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 PP2D1A8MPX8 630 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 UBE2SQ16763 222 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 SYCP3Q8IZU3 236 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 RNF26Q9BY78 433 aaPredicted RBP18.06■□□□□ 0.48
SYNM-201ENST00000328642 TRAF5O00463 557 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 CYP4A11Q02928 519 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 EVX2Q03828 476 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 GRIN1Q05586 938 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 NCAPH2Q6IBW4 605 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 CABP7Q86V35 215 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 CENPHQ9H3R5 247 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 CSGALNACT2Q8N6G5 542 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 STAG1Q8WVM7 1258 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 CAPZA3Q96KX2 299 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 RMND1Q9NWS8 449 aa18.06■□□□□ 0.48
SYNM-201ENST00000328642 BBOX1O75936 387 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 PLCD1P51178 756 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 ADCY7P51828 1080 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 CERKLQ49MI3 558 aaPredicted RBP18.05■□□□□ 0.48
SYNM-201ENST00000328642 HINFPQ9BQA5 517 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 JADE2Q9NQC1 790 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 HPS5Q9UPZ3 1129 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 TBC1D8BQ0IIM8 1120 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 DLGAP5Q15398 846 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 LRP10Q7Z4F1 713 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 SERPINB13Q9UIV8 391 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 CALCRLQ16602 461 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 HSP90B2PQ58FF3 399 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 PSMB7Q99436 277 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 SRRTQ9BXP5 876 aaKnown RBP18.05■□□□□ 0.48
SYNM-201ENST00000328642 SLC39A2Q9NP94 309 aa18.05■□□□□ 0.48
SYNM-201ENST00000328642 PDE6BP35913 854 aa18.04■□□□□ 0.48
SYNM-201ENST00000328642 ZNF569Q5MCW4 686 aa18.04■□□□□ 0.48
SYNM-201ENST00000328642 TMEM87AQ8NBN3 555 aa18.04■□□□□ 0.48
SYNM-201ENST00000328642 TDRD3Q9H7E2 651 aaKnown RBP18.04■□□□□ 0.48
SYNM-201ENST00000328642 NELFBQ8WX92 580 aa18.04■□□□□ 0.48
SYNM-201ENST00000328642 TMEM47Q9BQJ4 181 aa18.04■□□□□ 0.48
SYNM-201ENST00000328642 KIF13AQ9H1H9 1805 aa18.04■□□□□ 0.48
SYNM-201ENST00000328642 SV2BQ7L1I2 683 aa18.04■□□□□ 0.48
SYNM-201ENST00000328642 TBCAO75347 108 aaKnown RBP18.03■□□□□ 0.48
SYNM-201ENST00000328642 NOP2P46087 812 aaKnown RBP18.03■□□□□ 0.48
SYNM-201ENST00000328642 SYCP1Q15431 976 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms