RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 H3BS24 57 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 TLR3O15455 904 aaKnown RBP2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 GRIN3BO60391 1043 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 ITGB5P18084 799 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 ZNF76P36508 570 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 TNNI2P48788 182 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 CHMP4BP1P59074 171 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 ZP2Q05996 745 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 DNAJB8Q8NHS0 232 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 HSPA12BQ96MM6 686 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 KRTAP4-8Q9BYQ9 185 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 CEP131Q9UPN4 1083 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 POLR3KQ9Y2Y1 108 aaPredicted RBP2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 RNF114Q9Y508 228 aa2.76□□□□□ -1.97
CCDC144A-201ENST00000328495 RBM47A0AV96 593 aaKnown RBP2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 TXKP42681 527 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 FBXL19Q6PCT2 694 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 FBXO27Q8NI29 283 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 ZNF296Q8WUU4 475 aaPredicted RBP2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 MBNL3Q9NUK0 354 aaKnown RBP2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 LMCD1Q9NZU5 365 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 GAPVD1Q14C86 1478 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 KIAA0556O60303 1618 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 RNASE1P07998 156 aaKnown RBP2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 ATG4DQ86TL0 474 aaPredicted RBP2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 PHACTR4Q8IZ21 702 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 CCDC74BQ96LY2 380 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 METTL5Q9NRN9 209 aaKnown RBP2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 SEMA3GQ9NS98 782 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 ADAMTS6Q9UKP5 1117 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 KCNH3Q9ULD8 1083 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 ST14Q9Y5Y6 855 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 UNC13BO14795 1591 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 CNTNAP4Q9C0A0 1308 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 UPK3BL1B0FP48 263 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 UPK3BL2E5RIL1 263 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 GREM1O60565 184 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 TNK2Q07912 1038 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 APOBRQ0VD83 1088 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 LRRN4CLQ8ND94 238 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 RNF141Q8WVD5 230 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 TRIT1Q9H3H1 467 aaKnown RBP2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 CARS2Q9HA77 564 aaKnown RBP2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 ATP13A1Q9HD20 1204 aa2.75□□□□□ -1.97
CCDC144A-201ENST00000328495 SHANK3Q9BYB0 1731 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 KIAA0825Q8IV33 1275 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 PPP1R13LQ8WUF5 828 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 CCDC120Q96HB5 630 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 FMNL2Q96PY5 1086 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 ASPNQ9BXN1 380 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 BRMS1Q9HCU9 246 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 ADAMTS1Q9UHI8 967 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 PCDHB14Q9Y5E9 798 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 MAP3K4Q9Y6R4 1608 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 CHURC1-FNTBB4DL54 471 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 PAPLNO95428 1278 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 RAG1P15918 1043 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 TMPRSS7Q7RTY8 843 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 UBE2FQ969M7 185 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 SPON2Q9BUD6 331 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 BACH2Q9BYV9 841 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 PRDM7Q9NQW5 492 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 GPATCH2Q9NW75 528 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 GMIPQ9P107 970 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 ZSWIM5Q9P217 1185 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 SHROOM2Q13796 1616 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 ATE1O95260 518 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 VAMP1P23763 118 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 GBP1P32455 592 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 ZNF165P49910 485 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 SEZ6Q53EL9 994 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 USP48Q86UV5 1035 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 FLAD1Q8NFF5 587 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 BAHD1Q8TBE0 780 aaPredicted RBP2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 NKD1Q969G9 470 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 NT5C1AQ9BXI3 368 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 UBP1Q9NZI7 540 aa2.74□□□□□ -1.97
CCDC144A-201ENST00000328495 CRKP46108 304 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 RNF4P78317 190 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 FANCCQ00597 558 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 REXO1Q8N1G1 1221 aaKnown RBP2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 DTWD2Q8NBA8 298 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 RNF34Q969K3 372 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 Q96M66 194 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 KREMEN1Q96MU8 473 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 LRRC7Q96NW7 1537 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 RGS13O14921 159 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 DNAJA2O60884 412 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 MCM4P33991 863 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 TRIM26Q12899 539 aaPredicted RBP2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 LRRFIP1Q32MZ4 808 aaKnown RBP2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 ARSHQ5FYA8 562 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 LDLRAD1Q5T700 205 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 OVOS1Q6IE37 1185 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 GK5Q6ZS86 529 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 FAM168AQ92567 244 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 KIF2CQ99661 725 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 GPR62Q9BZJ7 368 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 EHMT1Q9H9B1 1298 aa2.73□□□□□ -1.97
CCDC144A-201ENST00000328495 CROCC2H7BZ55 1655 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms