RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 CLPPQ16740 277 aaPredicted RBP10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 THEMIS2Q5TEJ8 643 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 CCDC73Q6ZRK6 1079 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 TTC6Q86TZ1 520 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 DHX40Q8IX18 779 aaKnown RBP10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 ARFGAP2Q8N6H7 521 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 EHBP1Q8NDI1 1231 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 RSPH1Q8WYR4 309 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 SPATA32Q96LK8 384 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 GDAP1L1Q96MZ0 367 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 UPF3BQ9BZI7 483 aaKnown RBP10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 TPCN1Q9ULQ1 816 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 PAIP2BQ9ULR5 123 aaKnown RBP10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 TMED5Q9Y3A6 229 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 ASB3Q9Y575 518 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 UTRNP46939 3433 aa10.39□□□□□ -0.75
NPIPA1-201ENST00000328085 DLC1Q96QB1 1528 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 TMEM221A6NGB7 291 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 SMIM24O75264 130 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 FAM107AO95990 144 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 GNAT1P11488 350 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 CCND1P24385 295 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 MRPS25P82663 173 aaKnown RBP10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 NEXNQ0ZGT2 675 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 IFT88Q13099 833 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 NNTQ13423 1086 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 ARID5BQ14865 1188 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 ENOX2Q16206 610 aaKnown RBP10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 PPP4R3AQ6IN85 833 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 IQCEQ6IPM2 695 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 CCDC70Q6NSX1 233 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 KDM7AQ6ZMT4 941 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 PTF1AQ7RTS3 328 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 TMC6Q7Z403 805 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 ARHGEF25Q86VW2 580 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 LMNTD2Q8IXW0 634 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 NSMCE1Q8WV22 266 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 FAM81BQ96LP2 452 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 SCLT1Q96NL6 688 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 SGIP1Q9BQI5 828 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 FAM192AQ9GZU8 254 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 PCDH18Q9HCL0 1135 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 DMAP1Q9NPF5 467 aaPredicted RBP10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 WDR35Q9P2L0 1181 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 TECPR2O15040 1411 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 SHANK3Q9BYB0 1731 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 KIAA1210Q9ULL0 1709 aa10.38□□□□□ -0.75
NPIPA1-201ENST00000328085 RGPD8O14715 1765 aaPredicted RBP10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 LRRIQ3A6PVS8 624 aaPredicted RBP10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 GOLGA8AA7E2F4 631 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 PLSCR1O15162 318 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 BIRC5O15392 142 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 PFKFB2O60825 505 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 FCHSD2O94868 740 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 ATP6V1G2O95670 118 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 ALADP13716 330 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 ATP4AP20648 1035 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 PHEXP78562 749 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 CCDC15Q0P6D6 951 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 CUL4BQ13620 913 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 MYBPC3Q14896 1274 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 KRT72Q14CN4 511 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 IFI16Q16666 785 aaKnown RBP10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 RSPH3Q86UC2 560 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 FAM228AQ86W67 206 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 CCDC65Q8IXS2 484 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 CCDC155Q8N6L0 562 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 WDR66Q8TBY9 1149 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 IRGQQ8WZA9 623 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 OPTNQ96CV9 577 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 MAML3Q96JK9 1138 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 SMC6Q96SB8 1091 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 MTA3Q9BTC8 594 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 BCL2L13Q9BXK5 485 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 ALDH8A1Q9H2A2 487 aaPredicted RBP10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 VCXQ9H320 206 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 GOLPH3LQ9H4A5 285 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 NOD2Q9HC29 1040 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 QPCTLQ9NXS2 382 aa10.37□□□□□ -0.75
NPIPA1-201ENST00000328085 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 CPSF1Q10570 1443 aaKnown RBP10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 CCDC162PA2VCL2 907 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 CTAGE9A4FU28 777 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 RGL2O15211 777 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 PRPF3O43395 683 aaKnown RBP10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 FLOT1O75955 427 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 CCDC175P0C221 793 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 LINGO3P0C6S8 592 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 FAM200BP0CF97 657 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 TROVE2P10155 538 aaKnown RBP eCLIP10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 BCRP11274 1271 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 TOP1P11387 765 aaKnown RBP10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 NAT1P18440 290 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 CCT6AP40227 531 aaKnown RBP10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 VSNL1P62760 191 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 CKAP4Q07065 602 aaKnown RBP10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 KIF5AQ12840 1032 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 PABPC1LQ4VXU2 614 aaKnown RBP10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 TMEM132EQ6IEE7 984 aa10.36□□□□□ -0.75
NPIPA1-201ENST00000328085 BARGINQ6ZT62 677 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms