RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 NCOA5Q9HCD5 579 aaKnown RBP21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 CLIP2Q9UDT6 1046 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 TOP1P11387 765 aaKnown RBP21.84■■□□□ 1.09
EXOSC3-201ENST00000327304 EEF2P13639 858 aaKnown RBP21.84■■□□□ 1.09
EXOSC3-201ENST00000327304 DEKP35659 375 aaKnown RBP21.84■■□□□ 1.09
EXOSC3-201ENST00000327304 HMGN5P82970 282 aaKnown RBP21.84■■□□□ 1.09
EXOSC3-201ENST00000327304 CATIPQ7Z7H3 387 aa21.84■■□□□ 1.09
EXOSC3-201ENST00000327304 CCDC144CPQ8IYA2 1237 aa21.84■■□□□ 1.09
EXOSC3-201ENST00000327304 LRRC47Q8N1G4 583 aaKnown RBP21.84■■□□□ 1.09
EXOSC3-201ENST00000327304 PNMA1Q8ND90 353 aa21.84■■□□□ 1.09
EXOSC3-201ENST00000327304 ZKSCAN4Q969J2 545 aaPredicted RBP21.84■■□□□ 1.09
EXOSC3-201ENST00000327304 GPBP1L1Q9HC44 474 aaPredicted RBP21.84■■□□□ 1.09
EXOSC3-201ENST00000327304 NF2P35240 595 aa21.83■■□□□ 1.09
EXOSC3-201ENST00000327304 SYNE3Q6ZMZ3 975 aa21.83■■□□□ 1.09
EXOSC3-201ENST00000327304 CCDC84Q86UT8 332 aaPredicted RBP21.83■■□□□ 1.09
EXOSC3-201ENST00000327304 NYAP2Q9P242 653 aa21.83■■□□□ 1.09
EXOSC3-201ENST00000327304 DOCK1Q14185 1865 aa21.83■■□□□ 1.09
EXOSC3-201ENST00000327304 MYH4Q9Y623 1939 aa21.83■■□□□ 1.08
EXOSC3-201ENST00000327304 DTNBO60941 627 aa21.83■■□□□ 1.08
EXOSC3-201ENST00000327304 ASNSP08243 561 aa21.83■■□□□ 1.08
EXOSC3-201ENST00000327304 METAP2P50579 478 aaKnown RBP eCLIP21.83■■□□□ 1.08
EXOSC3-201ENST00000327304 TROAPQ12815 778 aa21.83■■□□□ 1.08
EXOSC3-201ENST00000327304 KLHL40Q2TBA0 621 aa21.83■■□□□ 1.08
EXOSC3-201ENST00000327304 NSUN7Q8NE18 718 aaKnown RBP21.83■■□□□ 1.08
EXOSC3-201ENST00000327304 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.83■■□□□ 1.08
EXOSC3-201ENST00000327304 NUP133Q8WUM0 1156 aa21.83■■□□□ 1.08
EXOSC3-201ENST00000327304 PAPPA2Q9BXP8 1791 aa21.82■■□□□ 1.08
EXOSC3-201ENST00000327304 GOLGA8AA7E2F4 631 aa21.82■■□□□ 1.08
EXOSC3-201ENST00000327304 PPP1R12BO60237 982 aaPredicted RBP21.82■■□□□ 1.08
EXOSC3-201ENST00000327304 MOB2Q70IA6 237 aa21.82■■□□□ 1.08
EXOSC3-201ENST00000327304 RASGRP2Q7LDG7 609 aa21.82■■□□□ 1.08
EXOSC3-201ENST00000327304 KIF3AQ9Y496 699 aa21.82■■□□□ 1.08
EXOSC3-201ENST00000327304 NID2Q14112 1375 aa21.81■■□□□ 1.08
EXOSC3-201ENST00000327304 DDAH1O94760 285 aa21.81■■□□□ 1.08
EXOSC3-201ENST00000327304 PPP4R3BQ5MIZ7 849 aa21.81■■□□□ 1.08
EXOSC3-201ENST00000327304 CHADLQ6NUI6 762 aa21.81■■□□□ 1.08
EXOSC3-201ENST00000327304 SCYL3Q8IZE3 742 aa21.81■■□□□ 1.08
EXOSC3-201ENST00000327304 MTMR7Q9Y216 660 aa21.81■■□□□ 1.08
EXOSC3-201ENST00000327304 OTOFQ9HC10 1997 aa21.81■■□□□ 1.08
EXOSC3-201ENST00000327304 DHX16O60231 1041 aaKnown RBP21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 JAK2O60674 1132 aa21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 CDC27P30260 824 aa21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 RCAN1P53805 252 aa21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 ACER1Q8TDN7 264 aa21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 MKL1Q969V6 931 aa21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 FAM217BQ9NTX9 383 aaPredicted RBP21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 GINM1Q9NU53 330 aa21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 A0A1W2PRG0 241 aa21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 VPS37CA5D8V6 355 aaPredicted RBP21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 PRPF40AO75400 957 aaKnown RBP21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 CTDNEP1O95476 244 aa21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 ZNF408Q9H9D4 720 aa21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 DDX49Q9Y6V7 483 aaKnown RBP21.8■■□□□ 1.08
EXOSC3-201ENST00000327304 ADD1P35611 737 aaKnown RBP21.79■■□□□ 1.08
EXOSC3-201ENST00000327304 ECE1P42892 770 aa21.79■■□□□ 1.08
EXOSC3-201ENST00000327304 MAP3K9P80192 1104 aa21.79■■□□□ 1.08
EXOSC3-201ENST00000327304 TTLL12Q14166 644 aaPredicted RBP21.79■■□□□ 1.08
EXOSC3-201ENST00000327304 RTN1Q16799 776 aa21.79■■□□□ 1.08
EXOSC3-201ENST00000327304 NOL9Q5SY16 702 aaKnown RBP21.79■■□□□ 1.08
EXOSC3-201ENST00000327304 FAM184AQ8NB25 1140 aa21.79■■□□□ 1.08
EXOSC3-201ENST00000327304 FANCBQ8NB91 859 aa21.79■■□□□ 1.08
EXOSC3-201ENST00000327304 PTPDC1A2A3K4 754 aa21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 KIF3CO14782 793 aa21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 CALM1P0DP23 149 aa21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 CALM2P0DP24 149 aa21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 CALM3P0DP25 149 aa21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 IREB2P48200 963 aaKnown RBP21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 VGLL4Q14135 290 aa21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 TMEM87AQ8NBN3 555 aa21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 PICK1Q9NRD5 415 aa21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 ITGBL1O95965 494 aaPredicted RBP21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 ARHGEF10LQ9HCE6 1279 aa21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 SNCAIPQ9Y6H5 919 aa21.78■■□□□ 1.08
EXOSC3-201ENST00000327304 USP17L5A8MUK1 530 aa21.77■■□□□ 1.08
EXOSC3-201ENST00000327304 PTPRAP18433 802 aa21.77■■□□□ 1.08
EXOSC3-201ENST00000327304 GRM4Q14833 912 aa21.77■■□□□ 1.08
EXOSC3-201ENST00000327304 PPFIA3O75145 1194 aa21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 MAP3K11Q16584 847 aa21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 CTCFLQ8NI51 663 aaPredicted RBP21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 CHAMP1Q96JM3 812 aa21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 PDHBP11177 359 aa21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 ARMC9Q7Z3E5 817 aa21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 CMTR1Q8N1G2 835 aaKnown RBP21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 CLMNQ96JQ2 1002 aa21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 MAP3K14Q99558 947 aa21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 TMX2Q9Y320 296 aa21.76■■□□□ 1.07
EXOSC3-201ENST00000327304 UBE2Q2LH0YL09 131 aa21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 CPLX1O14810 134 aa21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 RAD21O60216 631 aa21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 CELF2O95319 508 aaKnown RBP21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 PLEKHA8P1O95397 391 aa21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 MBD3O95983 291 aa21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 CSPP1Q1MSJ5 1256 aa21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 USP17L2Q6R6M4 530 aa21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 STAG2Q8N3U4 1231 aa21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 DDX11Q96FC9 970 aa21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 MAD2L2Q9UI95 211 aa21.75■■□□□ 1.07
EXOSC3-201ENST00000327304 CSADQ9Y600 493 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms