RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 A0A087X0B3 334 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 FAM205CA6NFA0 338 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 KRT9P35527 623 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 DPYDQ12882 1025 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 TRIM14Q14142 442 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 KRT31Q15323 416 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 ZNF174Q15697 407 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 ZFP91Q96JP5 570 aaPredicted RBP16.51■□□□□ 0.23
SSBP3-201ENST00000326956 ABHD10Q9NUJ1 306 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 PPP1R3GB7ZBB8 358 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 COBLO75128 1261 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 IL2RBP14784 551 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 FAM71BQ8TC56 605 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 LRP2BPQ9P2M1 347 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 GUCA1BQ9UMX6 200 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 RTL9Q8NET4 1388 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 AKAP11Q9UKA4 1901 aa16.51■□□□□ 0.23
SSBP3-201ENST00000326956 PDE8AO60658 829 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 N4BP1O75113 896 aaKnown RBP16.5■□□□□ 0.23
SSBP3-201ENST00000326956 RCAN1P53805 252 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 PPP2R5BQ15173 497 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 HLFQ16534 295 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 IQUBQ8NA54 791 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 MIGA1Q8NAN2 632 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 ESR2Q92731 530 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 MTA3Q9BTC8 594 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 TAB2Q9NYJ8 693 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 RRP15Q9Y3B9 282 aaKnown RBP16.5■□□□□ 0.23
SSBP3-201ENST00000326956 ALS2Q96Q42 1657 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 hCG_1642624A0A1W2PR95 340 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 COPB1P53618 953 aaKnown RBP16.5■□□□□ 0.23
SSBP3-201ENST00000326956 RASGRF1Q13972 1273 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 LCORLQ8N3X6 602 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 MSL3Q8N5Y2 521 aaKnown RBP16.5■□□□□ 0.23
SSBP3-201ENST00000326956 BLZF1Q9H2G9 400 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 TACC3Q9Y6A5 838 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 NID2Q14112 1375 aa16.5■□□□□ 0.23
SSBP3-201ENST00000326956 TFRCP02786 760 aaKnown RBP16.49■□□□□ 0.23
SSBP3-201ENST00000326956 PAK1Q13153 545 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 MROH5Q6ZUA9 1318 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 KCPQ6ZWJ8 1503 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 ECM29Q5VYK3 1845 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 PRDM1O75626 825 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 ERVK-24P63145 666 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 MAP9Q49MG5 647 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 TTC38Q5R3I4 469 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 CATIPQ7Z7H3 387 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 SRLQ86TD4 932 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
SSBP3-201ENST00000326956 TNKSO95271 1327 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 TNS3Q68CZ2 1445 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 MCM3P25205 808 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 CDC25AP30304 524 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 UBXN1Q04323 297 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 PPARAQ07869 468 aa16.49■□□□□ 0.23
SSBP3-201ENST00000326956 NKX1-1Q15270 411 aaPredicted RBP16.49■□□□□ 0.23
SSBP3-201ENST00000326956 PYM1Q9BRP8 204 aaKnown RBP16.49■□□□□ 0.23
SSBP3-201ENST00000326956 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
SSBP3-201ENST00000326956 ZNF142P52746 1687 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-201ENST00000326956 NCAPH2Q6IBW4 605 aa16.48■□□□□ 0.23
SSBP3-201ENST00000326956 MED4Q9NPJ6 270 aa16.48■□□□□ 0.23
SSBP3-201ENST00000326956 LIMA1Q9UHB6 759 aaKnown RBP16.48■□□□□ 0.23
SSBP3-201ENST00000326956 EPN1Q9Y6I3 576 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-201ENST00000326956 KCNJ18B7U540 433 aa16.48■□□□□ 0.23
SSBP3-201ENST00000326956 TRIM66O15016 1216 aa16.48■□□□□ 0.23
SSBP3-201ENST00000326956 KCNJ12Q14500 433 aa16.48■□□□□ 0.23
SSBP3-201ENST00000326956 NOA1Q8NC60 698 aaKnown RBP16.48■□□□□ 0.23
SSBP3-201ENST00000326956 RSPH14Q9UHP6 348 aa16.48■□□□□ 0.23
SSBP3-201ENST00000326956 LCMT1Q9UIC8 334 aa16.48■□□□□ 0.23
SSBP3-201ENST00000326956 RWDD2AQ9UIY3 292 aa16.48■□□□□ 0.23
SSBP3-201ENST00000326956 COL18A1P39060 1754 aa16.48■□□□□ 0.23
SSBP3-201ENST00000326956 PTGDRQ13258 359 aa16.47■□□□□ 0.23
SSBP3-201ENST00000326956 NELFBQ8WX92 580 aa16.47■□□□□ 0.23
SSBP3-201ENST00000326956 RMND1Q9NWS8 449 aa16.47■□□□□ 0.23
SSBP3-201ENST00000326956 ABL1P00519 1130 aa16.47■□□□□ 0.23
SSBP3-201ENST00000326956 IFIT1BQ5T764 474 aaKnown RBP16.47■□□□□ 0.23
SSBP3-201ENST00000326956 PHF20Q9BVI0 1012 aa16.47■□□□□ 0.23
SSBP3-201ENST00000326956 MYO5AQ9Y4I1 1855 aaKnown RBP16.47■□□□□ 0.23
SSBP3-201ENST00000326956 IPO7O95373 1038 aaKnown RBP16.46■□□□□ 0.23
SSBP3-201ENST00000326956 TCP11X2Q5H9J9 407 aa16.46■□□□□ 0.23
SSBP3-201ENST00000326956 RASSF8Q8NHQ8 419 aa16.46■□□□□ 0.23
SSBP3-201ENST00000326956 ASAP1Q9ULH1 1129 aa16.46■□□□□ 0.23
SSBP3-201ENST00000326956 SNAP23O00161 211 aa16.46■□□□□ 0.23
SSBP3-201ENST00000326956 NDUFA10O95299 355 aa16.46■□□□□ 0.23
SSBP3-201ENST00000326956 CYP7A1P22680 504 aa16.46■□□□□ 0.23
SSBP3-201ENST00000326956 FECHP22830 423 aa16.46■□□□□ 0.23
SSBP3-201ENST00000326956 EARS2Q5JPH6 523 aaKnown RBP16.46■□□□□ 0.23
SSBP3-201ENST00000326956 CTCFLQ8NI51 663 aaPredicted RBP16.46■□□□□ 0.23
SSBP3-201ENST00000326956 MKRN1Q9UHC7 482 aaKnown RBP16.46■□□□□ 0.23
SSBP3-201ENST00000326956 MAPK8IP1Q9UQF2 711 aa16.46■□□□□ 0.23
SSBP3-201ENST00000326956 LUC7L2Q9Y383 392 aaKnown RBP16.46■□□□□ 0.23
SSBP3-201ENST00000326956 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.23
SSBP3-201ENST00000326956 PRPF3O43395 683 aaKnown RBP16.46■□□□□ 0.22
SSBP3-201ENST00000326956 GTPBP6O43824 516 aaPredicted RBP16.46■□□□□ 0.22
SSBP3-201ENST00000326956 ARHGAP25P42331 645 aa16.46■□□□□ 0.22
SSBP3-201ENST00000326956 KIAA1328Q86T90 577 aa16.46■□□□□ 0.22
SSBP3-201ENST00000326956 IQCA1Q86XH1 822 aa16.46■□□□□ 0.22
SSBP3-201ENST00000326956 OR8K1Q8NGG5 319 aa16.46■□□□□ 0.22
SSBP3-201ENST00000326956 CAGE1Q8TC20 777 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms