RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 CERS3Q8IU89 383 aa24.46■■□□□ 1.51
LIMS2-201ENST00000324938 SEPT12Q8IYM1 358 aa24.46■■□□□ 1.51
LIMS2-201ENST00000324938 DYNLL2Q96FJ2 89 aa24.46■■□□□ 1.51
LIMS2-201ENST00000324938 PDCL3Q9H2J4 239 aa24.46■■□□□ 1.51
LIMS2-201ENST00000324938 FOCADQ5VW36 1801 aa24.46■■□□□ 1.51
LIMS2-201ENST00000324938 LTBP1Q14766 1721 aa24.46■■□□□ 1.51
LIMS2-201ENST00000324938 MYH1P12882 1939 aa24.46■■□□□ 1.51
LIMS2-201ENST00000324938 ATP2B4P23634 1241 aa24.46■■□□□ 1.51
LIMS2-201ENST00000324938 TRAPPC10P48553 1259 aa24.46■■□□□ 1.51
LIMS2-201ENST00000324938 ST5P78524 1137 aa24.46■■□□□ 1.51
LIMS2-201ENST00000324938 RTFDC1Q9BY42 306 aaPredicted RBP24.46■■□□□ 1.51
LIMS2-201ENST00000324938 USP27XA6NNY8 438 aa24.45■■□□□ 1.5
LIMS2-201ENST00000324938 UBASH3AP57075 661 aa24.45■■□□□ 1.5
LIMS2-201ENST00000324938 NLRP5P59047 1200 aa24.45■■□□□ 1.5
LIMS2-201ENST00000324938 ATP2C1P98194 919 aaPredicted RBP24.45■■□□□ 1.5
LIMS2-201ENST00000324938 GRAMD1CQ8IYS0 662 aa24.45■■□□□ 1.5
LIMS2-201ENST00000324938 PNMA1Q8ND90 353 aa24.45■■□□□ 1.5
LIMS2-201ENST00000324938 CCDC34Q96HJ3 373 aa24.45■■□□□ 1.5
LIMS2-201ENST00000324938 CD209Q9NNX6 404 aa24.45■■□□□ 1.5
LIMS2-201ENST00000324938 TCP11L1Q9NUJ3 509 aa24.45■■□□□ 1.5
LIMS2-201ENST00000324938 FANCLQ9NW38 375 aa24.45■■□□□ 1.5
LIMS2-201ENST00000324938 UFL1O94874 794 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 SERPINC1P01008 464 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 SFPQP23246 707 aaKnown RBP eCLIP24.44■■□□□ 1.5
LIMS2-201ENST00000324938 EPSTI1Q96J88 318 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 A0A087X0B3 334 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 SERPINB2P05120 415 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 IL1R1P14778 569 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 GRM4Q14833 912 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 ZNF174Q15697 407 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 NYAP1Q6ZVC0 841 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 MTERF4Q7Z6M4 381 aaKnown RBP24.44■■□□□ 1.5
LIMS2-201ENST00000324938 CCAR2Q8N163 923 aaKnown RBP24.44■■□□□ 1.5
LIMS2-201ENST00000324938 TGFBRAP1Q8WUH2 860 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 DPF2Q92785 391 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 SYMPKQ92797 1274 aaKnown RBP24.44■■□□□ 1.5
LIMS2-201ENST00000324938 RBM17Q96I25 401 aaKnown RBP24.44■■□□□ 1.5
LIMS2-201ENST00000324938 MKNK2Q9HBH9 465 aa24.44■■□□□ 1.5
LIMS2-201ENST00000324938 KCNJ6P48051 423 aa24.43■■□□□ 1.5
LIMS2-201ENST00000324938 DHX58Q96C10 678 aa24.43■■□□□ 1.5
LIMS2-201ENST00000324938 SH3GLB2Q9NR46 395 aa24.43■■□□□ 1.5
LIMS2-201ENST00000324938 GGA1Q9UJY5 639 aa24.43■■□□□ 1.5
LIMS2-201ENST00000324938 PAXBP1Q9Y5B6 917 aa24.43■■□□□ 1.5
LIMS2-201ENST00000324938 SLFN14P0C7P3 912 aa24.43■■□□□ 1.5
LIMS2-201ENST00000324938 CALML3P27482 149 aa24.43■■□□□ 1.5
LIMS2-201ENST00000324938 SH3RF1Q7Z6J0 888 aa24.43■■□□□ 1.5
LIMS2-201ENST00000324938 ENOX1Q8TC92 643 aaKnown RBP24.43■■□□□ 1.5
LIMS2-201ENST00000324938 VEGFAP15692 232 aaPredicted RBP24.42■■□□□ 1.5
LIMS2-201ENST00000324938 PTGDRQ13258 359 aa24.42■■□□□ 1.5
LIMS2-201ENST00000324938 TRPC5Q9UL62 973 aaPredicted RBP24.42■■□□□ 1.5
LIMS2-201ENST00000324938 TSPY3P0CV98 308 aa24.41■■□□□ 1.5
LIMS2-201ENST00000324938 TSPY8P0CW00 308 aa24.41■■□□□ 1.5
LIMS2-201ENST00000324938 GNAQP50148 359 aa24.41■■□□□ 1.5
LIMS2-201ENST00000324938 CFAP100Q494V2 611 aa24.41■■□□□ 1.5
LIMS2-201ENST00000324938 PIK3AP1Q6ZUJ8 805 aa24.41■■□□□ 1.5
LIMS2-201ENST00000324938 CTIFO43310 598 aaKnown RBP24.41■■□□□ 1.5
LIMS2-201ENST00000324938 BTDP43251 543 aa24.41■■□□□ 1.5
LIMS2-201ENST00000324938 FMR1Q06787 632 aaKnown RBP eCLIP24.41■■□□□ 1.5
LIMS2-201ENST00000324938 ZNF827Q17R98 1081 aa24.41■■□□□ 1.5
LIMS2-201ENST00000324938 CEP135Q66GS9 1140 aa24.41■■□□□ 1.5
LIMS2-201ENST00000324938 VSTM4Q8IW00 320 aa24.41■■□□□ 1.5
LIMS2-201ENST00000324938 PODXL2Q9NZ53 605 aa24.41■■□□□ 1.5
LIMS2-201ENST00000324938 SNED1Q8TER0 1413 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 GPR75-ASB3A0A0A6YYF3 556 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 USP17L3A6NCW0 530 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 USP17L4A6NCW7 530 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 NRDCO43847 1150 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 ZNF18P17022 549 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 SLC27A3Q5K4L6 730 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 USP17L1Q7RTZ2 530 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 MAPKAPK5Q8IW41 473 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 ZNF444Q8N0Y2 327 aaPredicted RBP24.4■■□□□ 1.5
LIMS2-201ENST00000324938 STAG2Q8N3U4 1231 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 TSC1Q92574 1164 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 MAD2L2Q9UI95 211 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 BBOX1O75936 387 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 RASA1P20936 1047 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 HOXA10P31260 410 aaPredicted RBP24.4■■□□□ 1.5
LIMS2-201ENST00000324938 PLCD1P51178 756 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 PTPN14Q15678 1187 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 CT47A1Q5JQC4 288 aaPredicted RBP24.4■■□□□ 1.5
LIMS2-201ENST00000324938 SLC44A5Q8NCS7 719 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 PAGE5Q96GU1 130 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 NFE2L3Q9Y4A8 694 aa24.4■■□□□ 1.5
LIMS2-201ENST00000324938 BRWD3Q6RI45 1802 aa24.39■■□□□ 1.5
LIMS2-201ENST00000324938 VWA3AA6NCI4 1184 aa24.39■■□□□ 1.49
LIMS2-201ENST00000324938 ERCC5P28715 1186 aaPredicted RBP24.39■■□□□ 1.49
LIMS2-201ENST00000324938 BLIDQ8IZY5 108 aa24.39■■□□□ 1.49
LIMS2-201ENST00000324938 ZNF287Q9HBT7 754 aa24.39■■□□□ 1.49
LIMS2-201ENST00000324938 ADAMTS3O15072 1205 aa24.38■■□□□ 1.49
LIMS2-201ENST00000324938 SAP30BPQ9UHR5 308 aaKnown RBP24.38■■□□□ 1.49
LIMS2-201ENST00000324938 PCDHA4Q9UN74 947 aa24.38■■□□□ 1.49
LIMS2-201ENST00000324938 ANKRD31Q8N7Z5 1873 aa24.38■■□□□ 1.49
LIMS2-201ENST00000324938 PLCG2P16885 1265 aa24.38■■□□□ 1.49
LIMS2-201ENST00000324938 E4F1Q66K89 784 aaPredicted RBP24.38■■□□□ 1.49
LIMS2-201ENST00000324938 ZNF710Q8N1W2 664 aa24.38■■□□□ 1.49
LIMS2-201ENST00000324938 INTS13Q9NVM9 706 aa24.38■■□□□ 1.49
LIMS2-201ENST00000324938 PSDA5PKW4 1024 aaPredicted RBP24.37■■□□□ 1.49
LIMS2-201ENST00000324938 DPYDQ12882 1025 aa24.37■■□□□ 1.49
LIMS2-201ENST00000324938 C16orf86Q6ZW13 317 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms