RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 PLIN4Q96Q06 1357 aa21.05■□□□□ 0.96
SYNE4-201ENST00000324444 TBC1D12O60347 775 aa21.04■□□□□ 0.96
SYNE4-201ENST00000324444 DDAH1O94760 285 aa21.04■□□□□ 0.96
SYNE4-201ENST00000324444 LARGE1O95461 756 aa21.04■□□□□ 0.96
SYNE4-201ENST00000324444 DDIT3P35638 169 aa21.04■□□□□ 0.96
SYNE4-201ENST00000324444 ENAHQ8N8S7 591 aaPredicted RBP21.04■□□□□ 0.96
SYNE4-201ENST00000324444 NECAB1Q8N987 351 aa21.04■□□□□ 0.96
SYNE4-201ENST00000324444 NKX2-3Q8TAU0 364 aa21.04■□□□□ 0.96
SYNE4-201ENST00000324444 ZKSCAN3Q9BRR0 538 aa21.04■□□□□ 0.96
SYNE4-201ENST00000324444 KAT14Q9H8E8 782 aa21.04■□□□□ 0.96
SYNE4-201ENST00000324444 BRPF3Q9ULD4 1205 aa21.04■□□□□ 0.96
SYNE4-201ENST00000324444 NID2Q14112 1375 aa21.03■□□□□ 0.96
SYNE4-201ENST00000324444 SCRN1Q12765 414 aa21.03■□□□□ 0.96
SYNE4-201ENST00000324444 SPRYD7Q5W111 196 aa21.03■□□□□ 0.96
SYNE4-201ENST00000324444 SLC44A5Q8NCS7 719 aa21.03■□□□□ 0.96
SYNE4-201ENST00000324444 SLC10A4Q96EP9 437 aa21.03■□□□□ 0.96
SYNE4-201ENST00000324444 ABHD8Q96I13 439 aa21.03■□□□□ 0.96
SYNE4-201ENST00000324444 CLMNQ96JQ2 1002 aa21.03■□□□□ 0.96
SYNE4-201ENST00000324444 MAP3K14Q99558 947 aa21.03■□□□□ 0.96
SYNE4-201ENST00000324444 RBM28Q9NW13 759 aaKnown RBP21.03■□□□□ 0.96
SYNE4-201ENST00000324444 UNCXA6NJT0 531 aa21.02■□□□□ 0.96
SYNE4-201ENST00000324444 GOLGA8AA7E2F4 631 aa21.02■□□□□ 0.96
SYNE4-201ENST00000324444 IREB2P48200 963 aaKnown RBP21.02■□□□□ 0.96
SYNE4-201ENST00000324444 MAP3K10Q02779 954 aa21.02■□□□□ 0.96
SYNE4-201ENST00000324444 TATDN1Q6P1N9 297 aa21.02■□□□□ 0.96
SYNE4-201ENST00000324444 ZNF654Q8IZM8 581 aa21.02■□□□□ 0.96
SYNE4-201ENST00000324444 GPHNQ9NQX3 736 aaPredicted RBP21.02■□□□□ 0.96
SYNE4-201ENST00000324444 USP2O75604 605 aaPredicted RBP21.01■□□□□ 0.95
SYNE4-201ENST00000324444 SHMT1P34896 483 aa21.01■□□□□ 0.95
SYNE4-201ENST00000324444 CERKLQ49MI3 558 aaPredicted RBP21.01■□□□□ 0.95
SYNE4-201ENST00000324444 FAM184AQ8NB25 1140 aa21.01■□□□□ 0.95
SYNE4-201ENST00000324444 CABP5Q9NP86 173 aa21.01■□□□□ 0.95
SYNE4-201ENST00000324444 KIF5BP33176 963 aa21■□□□□ 0.95
SYNE4-201ENST00000324444 TM4SF4P48230 202 aa21■□□□□ 0.95
SYNE4-201ENST00000324444 CCT2P78371 535 aaKnown RBP21■□□□□ 0.95
SYNE4-201ENST00000324444 SREBF2Q12772 1141 aa21■□□□□ 0.95
SYNE4-201ENST00000324444 RGS22Q8NE09 1264 aa21■□□□□ 0.95
SYNE4-201ENST00000324444 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21■□□□□ 0.95
SYNE4-201ENST00000324444 SLURP2P0DP57 97 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 TOP1P11387 765 aaKnown RBP20.99■□□□□ 0.95
SYNE4-201ENST00000324444 GJB2P29033 226 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 NOVP48745 357 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 GNAQP50148 359 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 DGKZQ13574 1117 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 RTN1Q16799 776 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 TMEM179Q6ZVK1 233 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 MICU3Q86XE3 530 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 FANCBQ8NB91 859 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 CTCFLQ8NI51 663 aaPredicted RBP20.99■□□□□ 0.95
SYNE4-201ENST00000324444 SMARCC2Q8TAQ2 1214 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 WNK4Q96J92 1243 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 GINM1Q9NU53 330 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 HPS5Q9UPZ3 1129 aa20.99■□□□□ 0.95
SYNE4-201ENST00000324444 ANKRD13AQ8IZ07 590 aa20.98■□□□□ 0.95
SYNE4-201ENST00000324444 MCOLN1Q9GZU1 580 aa20.98■□□□□ 0.95
SYNE4-201ENST00000324444 KANSL2Q9H9L4 492 aa20.98■□□□□ 0.95
SYNE4-201ENST00000324444 IL17RBQ9NRM6 502 aa20.98■□□□□ 0.95
SYNE4-201ENST00000324444 STX8Q9UNK0 236 aa20.98■□□□□ 0.95
SYNE4-201ENST00000324444 ATAD5Q96QE3 1844 aa20.98■□□□□ 0.95
SYNE4-201ENST00000324444 FAM196BA6NMK8 535 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 TBC1D8O95759 1140 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 TTLL1O95922 423 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 DCAF15Q66K64 600 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 NSUN7Q8NE18 718 aaKnown RBP20.97■□□□□ 0.95
SYNE4-201ENST00000324444 WASF1Q92558 559 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 MTMR4Q9NYA4 1195 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 SYNPO2Q9UMS6 1093 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 PTPDC1A2A3K4 754 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 MPHOSPH10O00566 681 aaKnown RBP20.97■□□□□ 0.95
SYNE4-201ENST00000324444 ZBTB48P10074 688 aaPredicted RBP20.97■□□□□ 0.95
SYNE4-201ENST00000324444 AKR1B1P15121 316 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 ST3GAL1Q11201 340 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 ABCB5Q2M3G0 1257 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 RCSD1Q6JBY9 416 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 TRIM22Q8IYM9 498 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 PNMA1Q8ND90 353 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 NUP133Q8WUM0 1156 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 LZTS2Q9BRK4 669 aa20.97■□□□□ 0.95
SYNE4-201ENST00000324444 RBM27Q9P2N5 1060 aaKnown RBP20.97■□□□□ 0.95
SYNE4-201ENST00000324444 IGKV6D-41A0A0C4DH26 115 aa20.96■□□□□ 0.95
SYNE4-201ENST00000324444 MANSC4A6NHS7 340 aaPredicted RBP20.96■□□□□ 0.95
SYNE4-201ENST00000324444 TROAPQ12815 778 aa20.96■□□□□ 0.95
SYNE4-201ENST00000324444 RAB3GAP1Q15042 981 aa20.96■□□□□ 0.95
SYNE4-201ENST00000324444 LARP1BQ659C4 914 aaKnown RBP20.96■□□□□ 0.95
SYNE4-201ENST00000324444 CEP95Q96GE4 821 aa20.96■□□□□ 0.95
SYNE4-201ENST00000324444 STK36Q9NRP7 1315 aa20.95■□□□□ 0.94
SYNE4-201ENST00000324444 NMT2O60551 498 aa20.95■□□□□ 0.94
SYNE4-201ENST00000324444 IFNAR1P17181 557 aa20.95■□□□□ 0.94
SYNE4-201ENST00000324444 TMEM47Q9BQJ4 181 aa20.95■□□□□ 0.94
SYNE4-201ENST00000324444 ELP3Q9H9T3 547 aa20.95■□□□□ 0.94
SYNE4-201ENST00000324444 SENP2Q9HC62 589 aa20.95■□□□□ 0.94
SYNE4-201ENST00000324444 NCOA5Q9HCD5 579 aaKnown RBP20.95■□□□□ 0.94
SYNE4-201ENST00000324444 NYAP2Q9P242 653 aa20.95■□□□□ 0.94
SYNE4-201ENST00000324444 ATP6V1DQ9Y5K8 247 aa20.95■□□□□ 0.94
SYNE4-201ENST00000324444 DOCK1Q14185 1865 aa20.95■□□□□ 0.94
SYNE4-201ENST00000324444 OTOFQ9HC10 1997 aa20.95■□□□□ 0.94
SYNE4-201ENST00000324444 STX6O43752 255 aa20.94■□□□□ 0.94
SYNE4-201ENST00000324444 GJA5P36382 358 aa20.94■□□□□ 0.94
SYNE4-201ENST00000324444 AKAP17AQ02040 695 aaKnown RBP20.94■□□□□ 0.94
SYNE4-201ENST00000324444 SSRP1Q08945 709 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms