RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 KIF5BP33176 963 aa21.29■■□□□ 1
USP39-201ENST00000323701 ATL3Q6DD88 541 aa21.29■■□□□ 1
USP39-201ENST00000323701 CDAN1Q8IWY9 1227 aa21.29■■□□□ 1
USP39-201ENST00000323701 MAP3K14Q99558 947 aa21.29■■□□□ 1
USP39-201ENST00000323701 DHX36Q9H2U1 1008 aaKnown RBP21.29■■□□□ 1
USP39-201ENST00000323701 PI4KBQ9UBF8 816 aa21.29■■□□□ 1
USP39-201ENST00000323701 FAM205CA6NFA0 338 aa21.29■■□□□ 1
USP39-201ENST00000323701 USP17L5A8MUK1 530 aa21.29■■□□□ 1
USP39-201ENST00000323701 NPM3O75607 178 aaKnown RBP21.29■■□□□ 1
USP39-201ENST00000323701 TOP1P11387 765 aaKnown RBP21.29■■□□□ 1
USP39-201ENST00000323701 XRCC6P12956 609 aaKnown RBP eCLIP21.29■■□□□ 1
USP39-201ENST00000323701 GNL2Q13823 731 aaKnown RBP21.29■■□□□ 1
USP39-201ENST00000323701 NOSTRINQ8IVI9 506 aa21.29■■□□□ 1
USP39-201ENST00000323701 PHF20Q9BVI0 1012 aa21.29■■□□□ 1
USP39-201ENST00000323701 POLR3EQ9NVU0 708 aa21.29■■□□□ 1
USP39-201ENST00000323701 TOB1P50616 345 aaPredicted RBP21.28■■□□□ 1
USP39-201ENST00000323701 JAG1P78504 1218 aa21.28■■□□□ 1
USP39-201ENST00000323701 DLGAP5Q15398 846 aa21.28■■□□□ 1
USP39-201ENST00000323701 NOM1Q5C9Z4 860 aaKnown RBP21.28■■□□□ 1
USP39-201ENST00000323701 EARS2Q5JPH6 523 aaKnown RBP21.28■■□□□ 1
USP39-201ENST00000323701 OGFOD1Q8N543 542 aa21.28■■□□□ 1
USP39-201ENST00000323701 ZNF70Q9UC06 446 aaPredicted RBP21.28■■□□□ 1
USP39-201ENST00000323701 PCDHA7Q9UN72 937 aa21.28■■□□□ 1
USP39-201ENST00000323701 MPHOSPH10O00566 681 aaKnown RBP21.27■■□□□ 1
USP39-201ENST00000323701 NR1I2O75469 434 aa21.27■■□□□ 1
USP39-201ENST00000323701 EGFRP00533 1210 aa21.27■■□□□ 1
USP39-201ENST00000323701 NASPP49321 788 aaPredicted RBP21.27■■□□□ 1
USP39-201ENST00000323701 RRP1BQ14684 758 aaKnown RBP21.27■■□□□ 1
USP39-201ENST00000323701 ANO1Q5XXA6 986 aa21.27■■□□□ 1
USP39-201ENST00000323701 JDP2Q8WYK2 163 aa21.27■■□□□ 1
USP39-201ENST00000323701 GOLPH3LQ9H4A5 285 aa21.27■■□□□ 1
USP39-201ENST00000323701 CLIP2Q9UDT6 1046 aa21.27■■□□□ 1
USP39-201ENST00000323701 SCAF8Q9UPN6 1271 aaKnown RBP21.27■■□□□ 1
USP39-201ENST00000323701 GREB1LQ9C091 1923 aaPredicted RBP21.27■■□□□ 1
USP39-201ENST00000323701 GOLGA6L4A6NEF3 574 aa21.27■■□□□ 1
USP39-201ENST00000323701 SF3A1Q15459 793 aaKnown RBP21.27■■□□□ 1
USP39-201ENST00000323701 CCDC183Q5T5S1 534 aa21.27■■□□□ 1
USP39-201ENST00000323701 CIAPIN1Q6FI81 312 aa21.27■■□□□ 1
USP39-201ENST00000323701 AGBL3Q8NEM8 1001 aa21.27■■□□□ 1
USP39-201ENST00000323701 GPKOWQ92917 476 aaPredicted RBP eCLIP21.27■■□□□ 1
USP39-201ENST00000323701 DACT1Q9NYF0 836 aa21.27■■□□□ 1
USP39-201ENST00000323701 ATRNL1Q5VV63 1379 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 KLRF2D3W0D1 207 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 ENTPD3O75355 529 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 SCG2P13521 617 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 ME1P48163 572 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 PFKFB3Q16875 520 aaPredicted RBP21.26■□□□□ 0.99
USP39-201ENST00000323701 NBPF9Q3BBW0 867 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 TYW1BQ6NUM6 668 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 PANK2Q9BZ23 570 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 GRPEL1Q9HAV7 217 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 CNTNAP1P78357 1384 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 BICD2Q8TD16 824 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 FOXP1Q9H334 677 aaPredicted RBP21.26■□□□□ 0.99
USP39-201ENST00000323701 HDAC9Q9UKV0 1011 aa21.26■□□□□ 0.99
USP39-201ENST00000323701 PTPAQ15257 358 aa21.25■□□□□ 0.99
USP39-201ENST00000323701 SPDYE2Q495Y8 402 aa21.25■□□□□ 0.99
USP39-201ENST00000323701 TATDN1Q6P1N9 297 aa21.25■□□□□ 0.99
USP39-201ENST00000323701 LRSAM1Q6UWE0 723 aa21.25■□□□□ 0.99
USP39-201ENST00000323701 METTL16Q86W50 562 aaKnown RBP21.25■□□□□ 0.99
USP39-201ENST00000323701 SYAP1Q96A49 352 aaPredicted RBP21.25■□□□□ 0.99
USP39-201ENST00000323701 CSRNP1Q96S65 589 aa21.25■□□□□ 0.99
USP39-201ENST00000323701 GDF11O95390 407 aa21.24■□□□□ 0.99
USP39-201ENST00000323701 PDHBP11177 359 aa21.24■□□□□ 0.99
USP39-201ENST00000323701 STK38Q15208 465 aa21.24■□□□□ 0.99
USP39-201ENST00000323701 SAFBQ15424 915 aaKnown RBP eCLIP21.24■□□□□ 0.99
USP39-201ENST00000323701 CAMK4Q16566 473 aa21.24■□□□□ 0.99
USP39-201ENST00000323701 ZBED3Q96IU2 234 aaPredicted RBP21.24■□□□□ 0.99
USP39-201ENST00000323701 FRMPD2Q68DX3 1309 aaPredicted RBP21.24■□□□□ 0.99
USP39-201ENST00000323701 SPTLC2O15270 562 aa21.24■□□□□ 0.99
USP39-201ENST00000323701 YEATS4O95619 227 aa21.24■□□□□ 0.99
USP39-201ENST00000323701 TTLL1O95922 423 aa21.24■□□□□ 0.99
USP39-201ENST00000323701 PARP1P09874 1014 aaKnown RBP21.24■□□□□ 0.99
USP39-201ENST00000323701 MARCKSP29966 332 aaPredicted RBP21.24■□□□□ 0.99
USP39-201ENST00000323701 CERKLQ49MI3 558 aaPredicted RBP21.24■□□□□ 0.99
USP39-201ENST00000323701 SIAH1Q8IUQ4 282 aa21.24■□□□□ 0.99
USP39-201ENST00000323701 RBSNQ9H1K0 784 aa21.24■□□□□ 0.99
USP39-201ENST00000323701 WNT10BO00744 389 aa21.23■□□□□ 0.99
USP39-201ENST00000323701 CCAR1Q8IX12 1150 aaKnown RBP21.23■□□□□ 0.99
USP39-201ENST00000323701 TNFRSF25Q93038 417 aa21.23■□□□□ 0.99
USP39-201ENST00000323701 UBA5Q9GZZ9 404 aa21.23■□□□□ 0.99
USP39-201ENST00000323701 VEZTQ9HBM0 779 aa21.23■□□□□ 0.99
USP39-201ENST00000323701 WNT7AO00755 349 aa21.23■□□□□ 0.99
USP39-201ENST00000323701 ATP2B2Q01814 1243 aa21.23■□□□□ 0.99
USP39-201ENST00000323701 SLC39A14Q15043 492 aa21.23■□□□□ 0.99
USP39-201ENST00000323701 AXDND1Q5T1B0 1012 aaPredicted RBP21.23■□□□□ 0.99
USP39-201ENST00000323701 FOXP4Q8IVH2 680 aaPredicted RBP21.23■□□□□ 0.99
USP39-201ENST00000323701 TMEM39BQ9GZU3 492 aa21.23■□□□□ 0.99
USP39-201ENST00000323701 CABP5Q9NP86 173 aa21.23■□□□□ 0.99
USP39-201ENST00000323701 LTBP3Q9NS15 1303 aa21.22■□□□□ 0.99
USP39-201ENST00000323701 SNW1Q13573 536 aaKnown RBP21.22■□□□□ 0.99
USP39-201ENST00000323701 SEPT2Q15019 361 aa21.22■□□□□ 0.99
USP39-201ENST00000323701 MTMR14Q8NCE2 650 aa21.22■□□□□ 0.99
USP39-201ENST00000323701 PCDHB6Q9Y5E3 794 aa21.22■□□□□ 0.99
USP39-201ENST00000323701 SNHG28P0DPA3 235 aa21.21■□□□□ 0.99
USP39-201ENST00000323701 GNAQP50148 359 aa21.21■□□□□ 0.99
USP39-201ENST00000323701 WWC2Q6AWC2 1192 aa21.21■□□□□ 0.99
USP39-201ENST00000323701 CCDC17Q96LX7 622 aa21.21■□□□□ 0.99
USP39-201ENST00000323701 MYOZ2Q9NPC6 264 aa21.21■□□□□ 0.99
USP39-201ENST00000323701 XBP1P17861 261 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms