RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 USP17L3A6NCW0 530 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 USP17L4A6NCW7 530 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 SERPINC1P01008 464 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 USP5P45974 858 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 GOLGA8FQ08AF8 430 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 GOLGA8DPQ0D2H9 430 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 USP17L1Q7RTZ2 530 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 PKNOX2Q96KN3 472 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 PLCD1P51178 756 aa23.54■■□□□ 1.36
TTC39C-202ENST00000317571 CEP135Q66GS9 1140 aa23.54■■□□□ 1.36
TTC39C-202ENST00000317571 SH3RF1Q7Z6J0 888 aa23.54■■□□□ 1.36
TTC39C-202ENST00000317571 FAM205AQ6ZU69 1335 aa23.54■■□□□ 1.36
TTC39C-202ENST00000317571 ZNF18P17022 549 aa23.54■■□□□ 1.36
TTC39C-202ENST00000317571 SFPQP23246 707 aaKnown RBP eCLIP23.54■■□□□ 1.36
TTC39C-202ENST00000317571 IL17AQ16552 155 aa23.54■■□□□ 1.36
TTC39C-202ENST00000317571 CFAP100Q494V2 611 aa23.54■■□□□ 1.36
TTC39C-202ENST00000317571 TYW1BQ6NUM6 668 aa23.54■■□□□ 1.36
TTC39C-202ENST00000317571 PIK3AP1Q6ZUJ8 805 aa23.54■■□□□ 1.36
TTC39C-202ENST00000317571 ATP2C1P98194 919 aaPredicted RBP23.53■■□□□ 1.36
TTC39C-202ENST00000317571 PTGDRQ13258 359 aa23.53■■□□□ 1.36
TTC39C-202ENST00000317571 TMED8Q6PL24 325 aaPredicted RBP23.53■■□□□ 1.36
TTC39C-202ENST00000317571 VSTM4Q8IW00 320 aa23.53■■□□□ 1.36
TTC39C-202ENST00000317571 TGFBRAP1Q8WUH2 860 aa23.53■■□□□ 1.36
TTC39C-202ENST00000317571 RTFDC1Q9BY42 306 aaPredicted RBP23.53■■□□□ 1.36
TTC39C-202ENST00000317571 HOOK1Q9UJC3 728 aaKnown RBP23.53■■□□□ 1.36
TTC39C-202ENST00000317571 RASGRP2Q7LDG7 609 aa23.53■■□□□ 1.36
TTC39C-202ENST00000317571 GPKOWQ92917 476 aaPredicted RBP eCLIP23.53■■□□□ 1.36
TTC39C-202ENST00000317571 SPATA31A6Q5VVP1 1343 aa23.53■■□□□ 1.36
TTC39C-202ENST00000317571 GYS1P13807 737 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 AFMP43652 599 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 PNMA1Q8ND90 353 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 ZNF592Q92610 1267 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 CCDC94Q9BW85 323 aaPredicted RBP23.52■■□□□ 1.36
TTC39C-202ENST00000317571 BRMS1Q9HCU9 246 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 NFE2L3Q9Y4A8 694 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 DDX60LQ5H9U9 1706 aaKnown RBP23.52■■□□□ 1.36
TTC39C-202ENST00000317571 VWA3AA6NCI4 1184 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 NLRP5P59047 1200 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 PPP4CP60510 307 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 PTPN14Q15678 1187 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 CRY2Q49AN0 593 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 C15orf52Q6ZUT6 534 aaKnown RBP23.52■■□□□ 1.36
TTC39C-202ENST00000317571 MAPKAPK5Q8IW41 473 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 MLKLQ8NB16 471 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 PAGE5Q96GU1 130 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 KAT14Q9H8E8 782 aa23.52■■□□□ 1.36
TTC39C-202ENST00000317571 SAP30BPQ9UHR5 308 aaKnown RBP23.52■■□□□ 1.36
TTC39C-202ENST00000317571 CD44P16070 742 aaKnown RBP23.51■■□□□ 1.35
TTC39C-202ENST00000317571 ZNF804AQ7Z570 1209 aa23.51■■□□□ 1.35
TTC39C-202ENST00000317571 DGKHQ86XP1 1220 aa23.51■■□□□ 1.35
TTC39C-202ENST00000317571 ANKS1AQ92625 1134 aa23.51■■□□□ 1.35
TTC39C-202ENST00000317571 FERMT2Q96AC1 680 aa23.51■■□□□ 1.35
TTC39C-202ENST00000317571 MAD2L2Q9UI95 211 aa23.51■■□□□ 1.35
TTC39C-202ENST00000317571 SLFN14P0C7P3 912 aa23.51■■□□□ 1.35
TTC39C-202ENST00000317571 NAA30Q147X3 362 aaPredicted RBP23.51■■□□□ 1.35
TTC39C-202ENST00000317571 TRIML1Q8N9V2 468 aa23.51■■□□□ 1.35
TTC39C-202ENST00000317571 ENOX1Q8TC92 643 aaKnown RBP23.51■■□□□ 1.35
TTC39C-202ENST00000317571 CERKQ8TCT0 537 aa23.51■■□□□ 1.35
TTC39C-202ENST00000317571 CD209Q9NNX6 404 aa23.51■■□□□ 1.35
TTC39C-202ENST00000317571 SAMSN1Q9NSI8 373 aaKnown RBP23.51■■□□□ 1.35
TTC39C-202ENST00000317571 SNED1Q8TER0 1413 aa23.5■■□□□ 1.35
TTC39C-202ENST00000317571 RASGRP4Q8TDF6 673 aa23.5■■□□□ 1.35
TTC39C-202ENST00000317571 PPP1R13BQ96KQ4 1090 aa23.5■■□□□ 1.35
TTC39C-202ENST00000317571 CYTH3O43739 400 aa23.5■■□□□ 1.35
TTC39C-202ENST00000317571 UFL1O94874 794 aa23.5■■□□□ 1.35
TTC39C-202ENST00000317571 KANK3Q6NY19 840 aa23.5■■□□□ 1.35
TTC39C-202ENST00000317571 PAXBP1Q9Y5B6 917 aa23.5■■□□□ 1.35
TTC39C-202ENST00000317571 CBFA2T2O43439 604 aa23.49■■□□□ 1.35
TTC39C-202ENST00000317571 GRM4Q14833 912 aa23.49■■□□□ 1.35
TTC39C-202ENST00000317571 E2F4Q16254 413 aa23.49■■□□□ 1.35
TTC39C-202ENST00000317571 SEPT12Q8IYM1 358 aa23.49■■□□□ 1.35
TTC39C-202ENST00000317571 ANKRD7Q92527 254 aa23.49■■□□□ 1.35
TTC39C-202ENST00000317571 STAMQ92783 540 aa23.49■■□□□ 1.35
TTC39C-202ENST00000317571 RPGRQ92834 1020 aaKnown RBP23.49■■□□□ 1.35
TTC39C-202ENST00000317571 TMX1Q9H3N1 280 aa23.49■■□□□ 1.35
TTC39C-202ENST00000317571 RASA1P20936 1047 aa23.49■■□□□ 1.35
TTC39C-202ENST00000317571 MCM7P33993 719 aa23.49■■□□□ 1.35
TTC39C-202ENST00000317571 NCBP1Q09161 790 aaKnown RBP23.49■■□□□ 1.35
TTC39C-202ENST00000317571 DPYDQ12882 1025 aa23.49■■□□□ 1.35
TTC39C-202ENST00000317571 MYO1BO43795 1136 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 ONECUT3O60422 494 aaPredicted RBP23.48■■□□□ 1.35
TTC39C-202ENST00000317571 BMP15O95972 392 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 KIF5BP33176 963 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 BTDP43251 543 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 SMYD4Q8IYR2 804 aaPredicted RBP23.48■■□□□ 1.35
TTC39C-202ENST00000317571 MTRQ99707 1265 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 MKNK2Q9HBH9 465 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 AFF2P51816 1311 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 M0R2N6 131 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 SERPINB2P05120 415 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 TMEM139Q8IV31 216 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 C4orf32Q8N8J7 132 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 MTMR7Q9Y216 660 aa23.48■■□□□ 1.35
TTC39C-202ENST00000317571 KCNJ6P48051 423 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 GSTO1P78417 241 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 DDR1Q08345 913 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 CCDC112Q8NEF3 446 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 BCL11BQ9C0K0 894 aaPredicted RBP23.47■■□□□ 1.35
TTC39C-202ENST00000317571 BAG3O95817 575 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 IL1R1P14778 569 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms