RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 CSADQ9Y600 493 aa21.9■■□□□ 1.1
CDK4-202ENST00000312990 PARP14Q460N5 1801 aa21.89■■□□□ 1.1
CDK4-202ENST00000312990 USP17L5A8MUK1 530 aa21.89■■□□□ 1.1
CDK4-202ENST00000312990 UBE2Q2LH0YL09 131 aa21.89■■□□□ 1.1
CDK4-202ENST00000312990 ZBTB43O43298 467 aa21.89■■□□□ 1.1
CDK4-202ENST00000312990 FKBP1BP68106 108 aa21.89■■□□□ 1.1
CDK4-202ENST00000312990 CATIPQ7Z7H3 387 aa21.89■■□□□ 1.1
CDK4-202ENST00000312990 SH2B1Q9NRF2 756 aaPredicted RBP21.89■■□□□ 1.1
CDK4-202ENST00000312990 PFKFB2O60825 505 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 DDAH1O94760 285 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 NECAB1Q8N987 351 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 ARHGEF10LQ9HCE6 1279 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 RCAN1P53805 252 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 SCRN1Q12765 414 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 BECN1Q14457 450 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 CCDC144CPQ8IYA2 1237 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 GTF3C6Q969F1 213 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 TMX2Q9Y320 296 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 LOC285556D6RIA3 1793 aa21.88■■□□□ 1.09
CDK4-202ENST00000312990 CCT2P78371 535 aaKnown RBP21.87■■□□□ 1.09
CDK4-202ENST00000312990 NUP133Q8WUM0 1156 aa21.87■■□□□ 1.09
CDK4-202ENST00000312990 CNKSR2Q8WXI2 1034 aa21.87■■□□□ 1.09
CDK4-202ENST00000312990 SLKQ9H2G2 1235 aaPredicted RBP21.87■■□□□ 1.09
CDK4-202ENST00000312990 ELP3Q9H9T3 547 aa21.87■■□□□ 1.09
CDK4-202ENST00000312990 NCOA5Q9HCD5 579 aaKnown RBP21.87■■□□□ 1.09
CDK4-202ENST00000312990 SYNPO2Q9UMS6 1093 aa21.87■■□□□ 1.09
CDK4-202ENST00000312990 ZHX2Q9Y6X8 837 aa21.87■■□□□ 1.09
CDK4-202ENST00000312990 METAP2P50579 478 aaKnown RBP eCLIP21.86■■□□□ 1.096e-6■■■■□ 19.7
CDK4-202ENST00000312990 SYNE3Q6ZMZ3 975 aa21.86■■□□□ 1.09
CDK4-202ENST00000312990 C2orf69Q8N8R5 385 aa21.86■■□□□ 1.09
CDK4-202ENST00000312990 WDR18Q9BV38 432 aa21.86■■□□□ 1.09
CDK4-202ENST00000312990 FAM217BQ9NTX9 383 aaPredicted RBP21.86■■□□□ 1.09
CDK4-202ENST00000312990 MTMR7Q9Y216 660 aa21.86■■□□□ 1.09
CDK4-202ENST00000312990 UNCXA6NJT0 531 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 GOLGA8AA7E2F4 631 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 SNHG28P0DPA3 235 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 PDHBP11177 359 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 CDC27P30260 824 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 CUL4AQ13619 759 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 CCDC83Q8IWF9 413 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 FANCBQ8NB91 859 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 GMCL1P1Q8NEA9 526 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 CHMP4CQ96CF2 233 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 CALM1P0DP23 149 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 CALM2P0DP24 149 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 CALM3P0DP25 149 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 SLC4A3P48751 1232 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 KIAA1755Q5JYT7 1200 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 ZNF280CQ8ND82 737 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 AS3MTQ9HBK9 375 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.85■■□□□ 1.09
CDK4-202ENST00000312990 AFG3L2Q9Y4W6 797 aa21.85■■□□□ 1.09
CDK4-202ENST00000312990 RLFQ13129 1914 aa21.84■■□□□ 1.09
CDK4-202ENST00000312990 SPDYE5A6NIY4 337 aa21.84■■□□□ 1.09
CDK4-202ENST00000312990 F5H6K3 240 aa21.84■■□□□ 1.09
CDK4-202ENST00000312990 KLRC3Q07444 240 aa21.84■■□□□ 1.09
CDK4-202ENST00000312990 SPP2Q13103 211 aa21.84■■□□□ 1.09
CDK4-202ENST00000312990 GRM4Q14833 912 aa21.84■■□□□ 1.09
CDK4-202ENST00000312990 MAP3K14Q99558 947 aa21.84■■□□□ 1.09
CDK4-202ENST00000312990 SH2D4AQ9H788 454 aa21.84■■□□□ 1.09
CDK4-202ENST00000312990 TRIM75PA6NK02 468 aa21.83■■□□□ 1.09
CDK4-202ENST00000312990 NDUFB10O96000 172 aa21.83■■□□□ 1.09
CDK4-202ENST00000312990 ADD1P35611 737 aaKnown RBP21.83■■□□□ 1.09
CDK4-202ENST00000312990 MTMR2Q13614 643 aa21.83■■□□□ 1.09
CDK4-202ENST00000312990 ZYXQ15942 572 aaKnown RBP21.83■■□□□ 1.09
CDK4-202ENST00000312990 RTN1Q16799 776 aa21.83■■□□□ 1.09
CDK4-202ENST00000312990 USP17L2Q6R6M4 530 aa21.83■■□□□ 1.09
CDK4-202ENST00000312990 ERO1BQ86YB8 467 aa21.83■■□□□ 1.09
CDK4-202ENST00000312990 FEZ1Q99689 392 aa21.83■■□□□ 1.09
CDK4-202ENST00000312990 KIAA1683Q9H0B3 1180 aa21.83■■□□□ 1.09
CDK4-202ENST00000312990 VCPKMTQ9H867 229 aa21.83■■□□□ 1.09
CDK4-202ENST00000312990 MAD2L2Q9UI95 211 aa21.83■■□□□ 1.09
CDK4-202ENST00000312990 USP17L10C9JJH3 530 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 BACE1P56817 501 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 PPATQ06203 517 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 FSTL1Q12841 308 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 DGKZQ13574 1117 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 SLFN13Q68D06 897 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 STAG2Q8N3U4 1231 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 OTUD5Q96G74 571 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 GOPCQ9HD26 462 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 RAD21O60216 631 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 DTNBO60941 627 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 SPICE1Q8N0Z3 855 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 CTCFLQ8NI51 663 aaPredicted RBP21.82■■□□□ 1.08
CDK4-202ENST00000312990 OPTNQ96CV9 577 aa21.82■■□□□ 1.08
CDK4-202ENST00000312990 PALM3A6NDB9 673 aaPredicted RBP21.81■■□□□ 1.08
CDK4-202ENST00000312990 IRF6O14896 467 aa21.81■■□□□ 1.08
CDK4-202ENST00000312990 CTDNEP1O95476 244 aa21.81■■□□□ 1.08
CDK4-202ENST00000312990 GOLGA8HP0CJ92 632 aa21.81■■□□□ 1.08
CDK4-202ENST00000312990 GJA5P36382 358 aa21.81■■□□□ 1.08
CDK4-202ENST00000312990 NTRK3Q16288 839 aa21.81■■□□□ 1.08
CDK4-202ENST00000312990 GMCL1Q96IK5 515 aa21.81■■□□□ 1.08
CDK4-202ENST00000312990 IPO9Q96P70 1041 aaKnown RBP21.81■■□□□ 1.08
CDK4-202ENST00000312990 SMCHD1A6NHR9 2005 aa21.81■■□□□ 1.08
CDK4-202ENST00000312990 PLEKHA8P1O95397 391 aa21.8■■□□□ 1.08
CDK4-202ENST00000312990 PARP1P09874 1014 aaKnown RBP21.8■■□□□ 1.08
CDK4-202ENST00000312990 HUNKP57058 714 aa21.8■■□□□ 1.08
CDK4-202ENST00000312990 ZNF543Q08ER8 600 aa21.8■■□□□ 1.08
CDK4-202ENST00000312990 PPIL2Q13356 520 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms