RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 CD248Q9HCU0 757 aa10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 CHCHD3Q9NX63 227 aaKnown RBP10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 TMCO5BA8MYB1 307 aa10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 B4E1Z4 1266 aa10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 PHACTR2O75167 634 aa10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 SNUPNO95149 360 aaKnown RBP10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 MBD4O95243 580 aa10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 FAM163BP0C2L3 166 aa10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 CELF1Q92879 486 aaKnown RBP10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 TRIM5Q9C035 493 aa10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 ZSWIM5Q9P217 1185 aa10.8□□□□□ -0.68
RBFOX1-201ENST00000311745 MROH7-TTC4A0A0A0MT08 1334 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 RGL2O15211 777 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 SLC5A1P13866 664 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 CCDC152Q4G0S7 254 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 MEX3CQ5U5Q3 659 aaKnown RBP10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 APOA5Q6Q788 366 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 CEP57Q86XR8 500 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 RTEL1Q9NZ71 1219 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 PPFIA2O75334 1257 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 TBC1D25Q3MII6 688 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 CKAP2LQ8IYA6 745 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 FMR1NBQ8N0W7 255 aaPredicted RBP10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 NAV1Q8NEY1 1877 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 ZNF396Q96N95 335 aaPredicted RBP10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 MAP3K14Q99558 947 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 SRP68Q9UHB9 627 aaKnown RBP10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 MINPP1Q9UNW1 487 aa10.79□□□□□ -0.68
RBFOX1-201ENST00000311745 GOLGA8BA8MQT2 603 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 KIF23Q02241 960 aaPredicted RBP10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 IQCB1Q15051 598 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 LINC00301Q8NCQ3 95 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 BAG1Q99933 345 aaPredicted RBP10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 NUP62CLQ9H1M0 184 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 CBX8Q9HC52 389 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 PCDHA7Q9UN72 937 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 ANGEL1Q9UNK9 670 aaKnown RBP10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 A0A087WWV3 80 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 RXRAP19793 462 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 MYSM1Q5VVJ2 828 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 ZSCAN25Q6NSZ9 544 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 LUZP1Q86V48 1076 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 STAG1Q8WVM7 1258 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 FAM84BQ96KN1 310 aaPredicted RBP10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 NRXN2Q9P2S2 1712 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 SASH3O75995 380 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 GYG1P46976 350 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 MAP3K11Q16584 847 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 KCNV1Q6PIU1 500 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 C11orf57Q6ZUT1 292 aaPredicted RBP10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 C3orf20Q8ND61 904 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 TSPAN18Q96SJ8 248 aa10.78□□□□□ -0.68
RBFOX1-201ENST00000311745 GUCY1A2P33402 732 aa10.77□□□□□ -0.68
RBFOX1-201ENST00000311745 MCM6Q14566 821 aa10.77□□□□□ -0.68
RBFOX1-201ENST00000311745 PTPAQ15257 358 aa10.77□□□□□ -0.68
RBFOX1-201ENST00000311745 LRRFIP1Q32MZ4 808 aaKnown RBP10.77□□□□□ -0.68
RBFOX1-201ENST00000311745 RABEP2Q9H5N1 569 aa10.77□□□□□ -0.68
RBFOX1-201ENST00000311745 DDX19AQ9NUU7 478 aaKnown RBP10.77□□□□□ -0.68
RBFOX1-201ENST00000311745 A0A1B0GUA9 196 aa10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 WDHD1O75717 1129 aaPredicted RBP10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 FGRP09769 529 aa10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 CEBPZQ03701 1054 aaKnown RBP10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 SEC23AQ15436 765 aa10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 ANO6Q4KMQ2 910 aa10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 RC3H1Q5TC82 1133 aaKnown RBP10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 FBXO33Q7Z6M2 555 aa10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 PLA2G4DQ86XP0 818 aa10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 SMARCC1Q92922 1105 aaPredicted RBP10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 MYL10Q9BUA6 226 aa10.77□□□□□ -0.69
RBFOX1-201ENST00000311745 C21orf2O43822 256 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 NRDCO43847 1150 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 AKNAD1Q5T1N1 836 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 FAM182BQ5T319 152 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 IQUBQ8NA54 791 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 TDRD7Q8NHU6 1098 aaKnown RBP10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 POLR3EQ9NVU0 708 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 H3BQV1 296 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 PIP4K2BP78356 416 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 IFFO2Q5TF58 517 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 ATL3Q6DD88 541 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 TXNRD3Q86VQ6 643 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 DHX40Q8IX18 779 aaKnown RBP10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 CCAR2Q8N163 923 aaKnown RBP10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 FAM200AQ8TCP9 573 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 YIPF2Q9BWQ6 316 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 NARFQ9UHQ1 456 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 RPSAP08865 295 aaKnown RBP10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 LIFRP42702 1097 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 FUT2Q10981 343 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 CCAR1Q8IX12 1150 aaKnown RBP10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 PHKBQ93100 1093 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 MPHOSPH8Q99549 860 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 IQSEC3Q9UPP2 1182 aaPredicted RBP10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 QSER1Q2KHR3 1735 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 ADAMTSL1Q8N6G6 1762 aa10.76□□□□□ -0.69
RBFOX1-201ENST00000311745 RBM47A0AV96 593 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 INF2Q27J81 1249 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms