RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 NLRP5P59047 1200 aa26.24■■□□□ 1.79
CTSF-201ENST00000310325 COL11A2P13942 1736 aaPredicted RBP26.23■■□□□ 1.79
CTSF-201ENST00000310325 SMTNL1A8MU46 457 aa26.23■■□□□ 1.79
CTSF-201ENST00000310325 NPR1P16066 1061 aa26.23■■□□□ 1.79
CTSF-201ENST00000310325 GNAQP50148 359 aa26.23■■□□□ 1.79
CTSF-201ENST00000310325 GTF2IP78347 998 aa26.23■■□□□ 1.79
CTSF-201ENST00000310325 CSRNP2Q9H175 543 aa26.23■■□□□ 1.79
CTSF-201ENST00000310325 QSER1Q2KHR3 1735 aa26.23■■□□□ 1.79
CTSF-201ENST00000310325 CDK8P49336 464 aa26.22■■□□□ 1.79
CTSF-201ENST00000310325 TERF1P54274 439 aa26.22■■□□□ 1.79
CTSF-201ENST00000310325 TPM4P67936 248 aa26.22■■□□□ 1.79
CTSF-201ENST00000310325 C17orf53Q8N3J3 647 aaPredicted RBP26.22■■□□□ 1.79
CTSF-201ENST00000310325 R3HCC1Q9Y3T6 440 aaKnown RBP26.22■■□□□ 1.79
CTSF-201ENST00000310325 IKBKBO14920 756 aa26.22■■□□□ 1.79
CTSF-201ENST00000310325 RIMBP2O15034 1052 aa26.22■■□□□ 1.79
CTSF-201ENST00000310325 MDM2Q00987 491 aaPredicted RBP26.22■■□□□ 1.79
CTSF-201ENST00000310325 ISM2Q6H9L7 571 aa26.22■■□□□ 1.79
CTSF-201ENST00000310325 STAG2Q8N3U4 1231 aa26.22■■□□□ 1.79
CTSF-201ENST00000310325 MAD2L2Q9UI95 211 aa26.22■■□□□ 1.79
CTSF-201ENST00000310325 POLR2DO15514 142 aaKnown RBP26.21■■□□□ 1.79
CTSF-201ENST00000310325 TTC38Q5R3I4 469 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 DAGLAQ9Y4D2 1042 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 APBA3O96018 575 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 NCAPHQ15003 741 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 CCDC144BQ3MJ40 725 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 NOM1Q5C9Z4 860 aaKnown RBP26.21■■□□□ 1.79
CTSF-201ENST00000310325 FLAD1Q8NFF5 587 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 FERMT2Q96AC1 680 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 TMEM47Q9BQJ4 181 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 SH3GLB2Q9NR46 395 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 STX8Q9UNK0 236 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 SUGT1Q9Y2Z0 365 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 PCDHA5Q9Y5H7 936 aa26.21■■□□□ 1.79
CTSF-201ENST00000310325 VEGFAP15692 232 aaPredicted RBP26.2■■□□□ 1.78
CTSF-201ENST00000310325 CALML3P27482 149 aa26.2■■□□□ 1.78
CTSF-201ENST00000310325 FOXP4Q8IVH2 680 aaPredicted RBP26.2■■□□□ 1.78
CTSF-201ENST00000310325 EYA3Q99504 573 aa26.2■■□□□ 1.78
CTSF-201ENST00000310325 SERTAD1Q9UHV2 236 aa26.2■■□□□ 1.78
CTSF-201ENST00000310325 WNT7AO00755 349 aa26.19■■□□□ 1.78
CTSF-201ENST00000310325 ALDH1B1P30837 517 aa26.19■■□□□ 1.78
CTSF-201ENST00000310325 TRAPPC10P48553 1259 aa26.19■■□□□ 1.78
CTSF-201ENST00000310325 POSTNQ15063 836 aa26.19■■□□□ 1.78
CTSF-201ENST00000310325 FOXN1O15353 648 aa26.19■■□□□ 1.78
CTSF-201ENST00000310325 PDE6BP35913 854 aa26.19■■□□□ 1.78
CTSF-201ENST00000310325 ZNF772Q68DY9 489 aaPredicted RBP26.19■■□□□ 1.78
CTSF-201ENST00000310325 KANK3Q6NY19 840 aa26.19■■□□□ 1.78
CTSF-201ENST00000310325 NEDD1Q8NHV4 660 aa26.19■■□□□ 1.78
CTSF-201ENST00000310325 ZC3H12CQ9C0D7 883 aaKnown RBP26.19■■□□□ 1.78
CTSF-201ENST00000310325 PIK3AP1Q6ZUJ8 805 aa26.18■■□□□ 1.78
CTSF-201ENST00000310325 ACTN4O43707 911 aaKnown RBP26.17■■□□□ 1.78
CTSF-201ENST00000310325 TPM2P07951 284 aa26.17■■□□□ 1.78
CTSF-201ENST00000310325 LRMPQ12912 555 aa26.17■■□□□ 1.78
CTSF-201ENST00000310325 ZNF174Q15697 407 aa26.17■■□□□ 1.78
CTSF-201ENST00000310325 OLFM4Q6UX06 510 aa26.17■■□□□ 1.78
CTSF-201ENST00000310325 USP49Q70CQ1 688 aa26.17■■□□□ 1.78
CTSF-201ENST00000310325 PARP3Q9Y6F1 533 aa26.17■■□□□ 1.78
CTSF-201ENST00000310325 MMP10P09238 476 aa26.17■■□□□ 1.78
CTSF-201ENST00000310325 ATP2C1P98194 919 aaPredicted RBP26.17■■□□□ 1.78
CTSF-201ENST00000310325 DNTTIP2Q5QJE6 756 aaKnown RBP26.17■■□□□ 1.78
CTSF-201ENST00000310325 DPP8Q6V1X1 898 aaPredicted RBP26.17■■□□□ 1.78
CTSF-201ENST00000310325 PDILTQ8N807 584 aa26.17■■□□□ 1.78
CTSF-201ENST00000310325 PALM3A6NDB9 673 aaPredicted RBP26.16■■□□□ 1.78
CTSF-201ENST00000310325 NT5DC1Q5TFE4 455 aa26.16■■□□□ 1.78
CTSF-201ENST00000310325 BLIDQ8IZY5 108 aa26.16■■□□□ 1.78
CTSF-201ENST00000310325 CACTINQ8WUQ7 758 aaKnown RBP26.16■■□□□ 1.78
CTSF-201ENST00000310325 GPKOWQ92917 476 aaPredicted RBP eCLIP26.16■■□□□ 1.78
CTSF-201ENST00000310325 LZTS2Q9BRK4 669 aa26.16■■□□□ 1.78
CTSF-201ENST00000310325 MYL5Q02045 173 aa26.15■■□□□ 1.78
CTSF-201ENST00000310325 MASTLQ96GX5 879 aa26.15■■□□□ 1.78
CTSF-201ENST00000310325 PRR29P0C7W0 189 aa26.15■■□□□ 1.78
CTSF-201ENST00000310325 SLC35G1Q2M3R5 365 aa26.15■■□□□ 1.78
CTSF-201ENST00000310325 CERS5Q8N5B7 392 aa26.15■■□□□ 1.78
CTSF-201ENST00000310325 PCDHA4Q9UN74 947 aa26.15■■□□□ 1.78
CTSF-201ENST00000310325 MYH8P13535 1937 aa26.15■■□□□ 1.78
CTSF-201ENST00000310325 CYTH3O43739 400 aa26.14■■□□□ 1.78
CTSF-201ENST00000310325 NEMFO60524 1076 aa26.14■■□□□ 1.78
CTSF-201ENST00000310325 PTGDRQ13258 359 aa26.14■■□□□ 1.78
CTSF-201ENST00000310325 SMARCE1Q969G3 411 aa26.14■■□□□ 1.78
CTSF-201ENST00000310325 MAN1B1Q9UKM7 699 aa26.14■■□□□ 1.78
CTSF-201ENST00000310325 MTMR7Q9Y216 660 aa26.14■■□□□ 1.78
CTSF-201ENST00000310325 ADAMTS3O15072 1205 aa26.14■■□□□ 1.77
CTSF-201ENST00000310325 SARSP49591 514 aaKnown RBP26.14■■□□□ 1.77
CTSF-201ENST00000310325 CCDC148Q8NFR7 591 aa26.14■■□□□ 1.77
CTSF-201ENST00000310325 SYMPKQ92797 1274 aaKnown RBP26.14■■□□□ 1.77
CTSF-201ENST00000310325 CCDC34Q96HJ3 373 aa26.14■■□□□ 1.77
CTSF-201ENST00000310325 EPSTI1Q96J88 318 aa26.14■■□□□ 1.77
CTSF-201ENST00000310325 TMX4Q9H1E5 349 aaPredicted RBP26.14■■□□□ 1.77
CTSF-201ENST00000310325 IFNKQ9P0W0 207 aa26.14■■□□□ 1.77
CTSF-201ENST00000310325 F8W031 263 aaPredicted RBP26.13■■□□□ 1.77
CTSF-201ENST00000310325 SMC2O95347 1197 aa26.13■■□□□ 1.77
CTSF-201ENST00000310325 BMP6P22004 513 aa26.13■■□□□ 1.77
CTSF-201ENST00000310325 LRRC8AQ8IWT6 810 aa26.13■■□□□ 1.77
CTSF-201ENST00000310325 XPO4Q9C0E2 1151 aaKnown RBP26.13■■□□□ 1.77
CTSF-201ENST00000310325 HSD3B7Q9H2F3 369 aa26.13■■□□□ 1.77
CTSF-201ENST00000310325 LMOD1P29536 600 aaPredicted RBP26.12■■□□□ 1.77
CTSF-201ENST00000310325 WWC2Q6AWC2 1192 aa26.12■■□□□ 1.77
CTSF-201ENST00000310325 TRIML1Q8N9V2 468 aa26.12■■□□□ 1.77
CTSF-201ENST00000310325 SPZ1Q9BXG8 430 aa26.12■■□□□ 1.77
CTSF-201ENST00000310325 TTF2Q9UNY4 1162 aaKnown RBP26.12■■□□□ 1.77
CTSF-201ENST00000310325 PLIN4Q96Q06 1357 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms