RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 ATRNL1Q5VV63 1379 aa13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 SHTN1A0MZ66 631 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 DDTLA6NHG4 134 aaPredicted RBP13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 SHMT1P34896 483 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 UBE2HP62256 183 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 RBM26Q5T8P6 1007 aaKnown RBP13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 V9GY48 417 aaPredicted RBP13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 GLTPD2A6NH11 291 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 AKR1B1P15121 316 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 GSE1Q14687 1217 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 ABCB5Q2M3G0 1257 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 NBPF11Q86T75 865 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 ZFPM1Q8IX07 1006 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 SEC63Q9UGP8 760 aaKnown RBP13.16□□□□□ -0.3
CTDSPL-202ENST00000310189 ELP1O95163 1332 aa13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 SMARCA1P28370 1054 aa13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 SF3A1Q15459 793 aaKnown RBP13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 KIF4BQ2VIQ3 1234 aa13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 TBC1D10BQ4KMP7 808 aaPredicted RBP13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 TATDN1Q6P1N9 297 aa13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 SAMD7Q7Z3H4 446 aa13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 FAM177A1Q8N128 213 aaPredicted RBP13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 CMTR1Q8N1G2 835 aaKnown RBP13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 CCDC12Q8WUD4 166 aaPredicted RBP13.15□□□□□ -0.3
CTDSPL-202ENST00000310189 MYH6P13533 1939 aa13.15□□□□□ -0.31
CTDSPL-202ENST00000310189 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 WNT10BO00744 389 aa13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 MMP1P03956 469 aa13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 SCG2P13521 617 aa13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 CALML3P27482 149 aa13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 EPS15P42566 896 aa13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 KIF23Q02241 960 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 METTL16Q86W50 562 aaKnown RBP13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 CCDC148Q8NFR7 591 aa13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 RRP36Q96EU6 259 aaKnown RBP13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 FOXP1Q9H334 677 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 GDPD2Q9HCC8 539 aa13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 NYAP2Q9P242 653 aa13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 ISY1Q9ULR0 285 aaKnown RBP13.14□□□□□ -0.31
CTDSPL-202ENST00000310189 IGKV6D-41A0A0C4DH26 115 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 KRT2P35908 639 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 NOVP48745 357 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 STK38Q15208 465 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 SH3BP5LQ7L8J4 393 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 JMYQ8N9B5 988 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 SH3GLB2Q9NR46 395 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 ADARB2Q9NS39 739 aaKnown RBP13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 MAD2L2Q9UI95 211 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
CTDSPL-202ENST00000310189 TCHHQ07283 1943 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 IQCA1LA6NCM1 817 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 PALM3A6NDB9 673 aaPredicted RBP13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 RAD21O60216 631 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 TBC1D12O60347 775 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 LETM1O95202 739 aaPredicted RBP13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 EGFRP00533 1210 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 NLRP5P59047 1200 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 ICA1Q05084 483 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 PFKFB3Q16875 520 aaPredicted RBP13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 NBPF9Q3BBW0 867 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 FAM173BQ6P4H8 233 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 DIS3L2Q8IYB7 885 aaKnown RBP13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 LEO1Q8WVC0 666 aaPredicted RBP13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 ZBED3Q96IU2 234 aaPredicted RBP13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 AIFM3Q96NN9 605 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 SPZ1Q9BXG8 430 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 ARHGEF10LQ9HCE6 1279 aa13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 NOL7Q9UMY1 257 aaKnown RBP13.12□□□□□ -0.31
CTDSPL-202ENST00000310189 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
CTDSPL-202ENST00000310189 U2AF2P26368 475 aaKnown RBP eCLIP13.11□□□□□ -0.312e-7■□□□□ 9.7
CTDSPL-202ENST00000310189 FUT2Q10981 343 aa13.11□□□□□ -0.31
CTDSPL-202ENST00000310189 CCDC96Q2M329 555 aa13.11□□□□□ -0.31
CTDSPL-202ENST00000310189 GALNT17Q6IS24 598 aa13.11□□□□□ -0.31
CTDSPL-202ENST00000310189 APOBEC3FQ8IUX4 373 aaKnown RBP13.11□□□□□ -0.31
CTDSPL-202ENST00000310189 NOSTRINQ8IVI9 506 aa13.11□□□□□ -0.31
CTDSPL-202ENST00000310189 LRRC47Q8N1G4 583 aaKnown RBP13.11□□□□□ -0.31
CTDSPL-202ENST00000310189 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
CTDSPL-202ENST00000310189 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
CTDSPL-202ENST00000310189 KCNG4Q8TDN1 519 aa13.11□□□□□ -0.31
CTDSPL-202ENST00000310189 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms