RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 USP17L5A8MUK1 530 aa12.83□□□□□ -0.36
TRIM59-201ENST00000309784 LMOD1P29536 600 aaPredicted RBP12.83□□□□□ -0.36
TRIM59-201ENST00000309784 TNFAIP1Q13829 316 aa12.83□□□□□ -0.36
TRIM59-201ENST00000309784 BRAPQ7Z569 592 aa12.83□□□□□ -0.36
TRIM59-201ENST00000309784 LEO1Q8WVC0 666 aaPredicted RBP12.83□□□□□ -0.36
TRIM59-201ENST00000309784 LMNB1P20700 586 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 SLC1A4P43007 532 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 RCAN1P53805 252 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 KIF23Q02241 960 aaPredicted RBP12.82□□□□□ -0.36
TRIM59-201ENST00000309784 PRKG1Q13976 671 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 CCDC73Q6ZRK6 1079 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 GPT2Q8TD30 523 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 MARCKSP29966 332 aaPredicted RBP12.82□□□□□ -0.36
TRIM59-201ENST00000309784 RASA3Q14644 834 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 KIF4BQ2VIQ3 1234 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 MYSM1Q5VVJ2 828 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 RRP36Q96EU6 259 aaKnown RBP12.82□□□□□ -0.36
TRIM59-201ENST00000309784 ROBO3Q96MS0 1386 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 QSER1Q2KHR3 1735 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 SYCE3A1L190 88 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 SCG2P13521 617 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 NR5A1Q13285 461 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 SHROOM1Q2M3G4 852 aaPredicted RBP12.82□□□□□ -0.36
TRIM59-201ENST00000309784 SPICE1Q8N0Z3 855 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 FAM151AQ8WW52 585 aa12.82□□□□□ -0.36
TRIM59-201ENST00000309784 UTRNP46939 3433 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 NT5C2P49902 561 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 NAPAP54920 295 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 KANSL2Q9H9L4 492 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 KIF28PB7ZC32 967 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 PRPF3O43395 683 aaKnown RBP12.81□□□□□ -0.36
TRIM59-201ENST00000309784 EEF2P13639 858 aaKnown RBP12.81□□□□□ -0.36
TRIM59-201ENST00000309784 KRT2P35908 639 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 SLC16A2P36021 539 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 LTBP1Q14766 1721 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 CAMK4Q16566 473 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 SPDYE2Q495Y8 402 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 SH3BP5LQ7L8J4 393 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 NBPF11Q86T75 865 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 STK36Q9NRP7 1315 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 GRM4Q14833 912 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 PRAMEF18Q5VWM3 479 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 GMLQ99445 158 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 TCP11L1Q9NUJ3 509 aa12.81□□□□□ -0.36
TRIM59-201ENST00000309784 MYH1P12882 1939 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 EGFRP00533 1210 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 RPS12P25398 132 aaKnown RBP12.8□□□□□ -0.36
TRIM59-201ENST00000309784 GABPAQ06546 454 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 ZNF541Q9H0D2 1346 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 NAV1Q8NEY1 1877 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 MMP1P03956 469 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 TMEM179Q6ZVK1 233 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 CDAN1Q8IWY9 1227 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 NOL7Q9UMY1 257 aaKnown RBP12.8□□□□□ -0.36
TRIM59-201ENST00000309784 TCHHQ07283 1943 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 SLFN13Q68D06 897 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 EHD4Q9H223 541 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 CLIC4Q9Y696 253 aa12.8□□□□□ -0.36
TRIM59-201ENST00000309784 ZRSR1Q15695 479 aaKnown RBP12.79□□□□□ -0.36
TRIM59-201ENST00000309784 NOSTRINQ8IVI9 506 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 DNAJC18Q9H819 358 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 HACL1Q9UJ83 578 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 CNTNAP5Q8WYK1 1306 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 CCDC194A0A1B0GVG4 234 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 SPTLC2O15270 562 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 DDNO94850 711 aaPredicted RBP12.79□□□□□ -0.36
TRIM59-201ENST00000309784 JMYQ8N9B5 988 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 OXER1Q8TDS5 423 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 PIGSQ96S52 555 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 ARHGEF10LQ9HCE6 1279 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 TIAM2Q8IVF5 1701 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 ANO1Q5XXA6 986 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 CCDC84Q86UT8 332 aaPredicted RBP12.79□□□□□ -0.36
TRIM59-201ENST00000309784 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRIM59-201ENST00000309784 MAD2L2Q9UI95 211 aa12.79□□□□□ -0.36
TRIM59-201ENST00000309784 HERC5Q9UII4 1024 aaKnown RBP12.79□□□□□ -0.36
TRIM59-201ENST00000309784 ANGEL2Q5VTE6 544 aaKnown RBP12.78□□□□□ -0.36
TRIM59-201ENST00000309784 PIK3AP1Q6ZUJ8 805 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 CCDC148Q8NFR7 591 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 ANP32BQ92688 251 aaKnown RBP12.78□□□□□ -0.36
TRIM59-201ENST00000309784 LZTS2Q9BRK4 669 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 TMEM63CQ9P1W3 806 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 PDHBP11177 359 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 CCAR1Q8IX12 1150 aaKnown RBP12.78□□□□□ -0.36
TRIM59-201ENST00000309784 FSIP1Q8NA03 581 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
TRIM59-201ENST00000309784 ASTN2O75129 1339 aaPredicted RBP12.78□□□□□ -0.36
TRIM59-201ENST00000309784 SNED1Q8TER0 1413 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 PLCB2Q00722 1185 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 RNF214Q8ND24 703 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 RASGRP4Q8TDF6 673 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
TRIM59-201ENST00000309784 DACT1Q9NYF0 836 aa12.78□□□□□ -0.36
TRIM59-201ENST00000309784 ADAMTSL1Q8N6G6 1762 aa12.77□□□□□ -0.36
TRIM59-201ENST00000309784 KINO60870 393 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms