RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 TSPY8P0CW00 308 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 ZSCAN20P17040 1043 aaPredicted RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 PCK1P35558 622 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 CEP85LQ5SZL2 805 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 SEPT14Q6ZU15 432 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 ANKS4BQ8N8V4 417 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 KCNB2Q92953 911 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 THRAP3Q9Y2W1 955 aaKnown RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 USP17L12C9JPN9 530 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 USP17L21D6R901 530 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 NOL3O60936 208 aaKnown RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 LDHBP07195 334 aaKnown RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 CA8P35219 290 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 NOP2P46087 812 aaKnown RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 LRP10Q7Z4F1 713 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 AIFM3Q96NN9 605 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 BAIAP2L1Q9UHR4 511 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 PPARAQ07869 468 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 LCORLQ8N3X6 602 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 MIPOL1Q8TD10 442 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 ZC3H12CQ9C0D7 883 aaKnown RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 PCDHA7Q9UN72 937 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 GCOM1H8Y6P7 765 aaPredicted RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 MYZAPP0CAP1 466 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 RAD51AP2Q09MP3 1159 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 RBBP5Q15291 538 aaKnown RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 MARCH10Q8NA82 808 aaPredicted RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 ZSWIM5Q9P217 1185 aa10.38□□□□□ -0.75
XCR1-201ENST00000309285 SRP68Q9UHB9 627 aaKnown RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 V9GY48 417 aaPredicted RBP10.38□□□□□ -0.75
XCR1-201ENST00000309285 SLIT3O75094 1523 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 RIMBP2O15034 1052 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 ZNF202O95125 648 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 AFMP43652 599 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 CETN1Q12798 172 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 FEZ2Q9UHY8 353 aaPredicted RBP10.37□□□□□ -0.75
XCR1-201ENST00000309285 CLIC4Q9Y696 253 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 A0A087WWV3 80 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 TRIM75PA6NK02 468 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 COL9A3Q14050 684 aaPredicted RBP10.37□□□□□ -0.75
XCR1-201ENST00000309285 ADALQ6DHV7 355 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 JPH2Q9BR39 696 aaPredicted RBP10.37□□□□□ -0.75
XCR1-201ENST00000309285 ALDH8A1Q9H2A2 487 aaPredicted RBP10.37□□□□□ -0.75
XCR1-201ENST00000309285 SLC24A3Q9HC58 644 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 KDM4FA0A1W2PPD8 638 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 TBC1D10CQ8IV04 446 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 GDAP1L1Q96MZ0 367 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 SERPINA10Q9UK55 444 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 RCOR1Q9UKL0 485 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 RGPD1P0DJD0 1748 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 ZMYM6O95789 1325 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 DEXIO95424 95 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 ARHGAP25P42331 645 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 EXOSC10Q01780 885 aaKnown RBP10.37□□□□□ -0.75
XCR1-201ENST00000309285 TEX2Q8IWB9 1127 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 ZNF654Q8IZM8 581 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 BICD1Q96G01 975 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 EHMT1Q9H9B1 1298 aa10.37□□□□□ -0.75
XCR1-201ENST00000309285 SEC31AO94979 1220 aaKnown RBP10.36□□□□□ -0.75
XCR1-201ENST00000309285 HPDP32754 393 aaPredicted RBP10.36□□□□□ -0.75
XCR1-201ENST00000309285 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 ZNF34Q8IZ26 560 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 ALS2CR12Q96Q35 445 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 GUCA1BQ9UMX6 200 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 CAMTA1Q9Y6Y1 1673 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 FGFR1OPO95684 399 aaKnown RBP10.36□□□□□ -0.75
XCR1-201ENST00000309285 BIRC2Q13490 618 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 PLS1Q14651 629 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 ZNF804AQ7Z570 1209 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 HOOK3Q86VS8 718 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 PGBD1Q96JS3 809 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 ZMAT2Q96NC0 199 aaKnown RBP10.36□□□□□ -0.75
XCR1-201ENST00000309285 RTL9Q8NET4 1388 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 N4BP3O15049 544 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 HEATR3Q7Z4Q2 680 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 PLEKHA4Q9H4M7 779 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 BTBD18B2RXH4 712 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 TUBBP07437 444 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 RPSAP08865 295 aaKnown RBP10.36□□□□□ -0.75
XCR1-201ENST00000309285 ACTN2P35609 894 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 SF3A3Q12874 501 aaKnown RBP eCLIP10.36□□□□□ -0.75
XCR1-201ENST00000309285 TACO1Q9BSH4 297 aaKnown RBP10.36□□□□□ -0.75
XCR1-201ENST00000309285 COMMD10Q9Y6G5 202 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 TNKSO95271 1327 aa10.36□□□□□ -0.75
XCR1-201ENST00000309285 GSTO1P78417 241 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 MB21D2Q8IYB1 491 aaPredicted RBP10.35□□□□□ -0.75
XCR1-201ENST00000309285 NDUFA8P51970 172 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 DYNLL1P63167 89 aaKnown RBP10.35□□□□□ -0.75
XCR1-201ENST00000309285 ITPK1Q13572 414 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 RILPL1Q5EBL4 403 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 FANCBQ8NB91 859 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 KIF1AQ12756 1690 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 UBN2Q6ZU65 1347 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 CALM1P0DP23 149 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 CALM2P0DP24 149 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 CALM3P0DP25 149 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 AMPD3Q01432 767 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 SP4Q02446 784 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms