RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 LZTFL1Q9NQ48 299 aa23.71■■□□□ 1.39
RELA-201ENST00000308639 COL14A1Q05707 1796 aaKnown RBP23.71■■□□□ 1.39
RELA-201ENST00000308639 CASQ1P31415 396 aa23.7■■□□□ 1.39
RELA-201ENST00000308639 RCAN1P53805 252 aa23.7■■□□□ 1.39
RELA-201ENST00000308639 TMTC3Q6ZXV5 915 aa23.7■■□□□ 1.39
RELA-201ENST00000308639 CNTNAP5Q8WYK1 1306 aa23.7■■□□□ 1.39
RELA-201ENST00000308639 MCM7P33993 719 aa23.7■■□□□ 1.38
RELA-201ENST00000308639 CCT6AP40227 531 aaKnown RBP23.7■■□□□ 1.38
RELA-201ENST00000308639 CAVIN4Q5BKX8 364 aa23.7■■□□□ 1.38
RELA-201ENST00000308639 RAD9BQ6WBX8 426 aa23.7■■□□□ 1.38
RELA-201ENST00000308639 SH3RF1Q7Z6J0 888 aa23.7■■□□□ 1.38
RELA-201ENST00000308639 FCHSD1Q86WN1 690 aa23.7■■□□□ 1.38
RELA-201ENST00000308639 CREBRFQ8IUR6 639 aa23.7■■□□□ 1.38
RELA-201ENST00000308639 CTNND2Q9UQB3 1225 aa23.7■■□□□ 1.38
RELA-201ENST00000308639 XDHP47989 1333 aa23.69■■□□□ 1.38
RELA-201ENST00000308639 PPP1R3GB7ZBB8 358 aa23.69■■□□□ 1.38
RELA-201ENST00000308639 PRDX5P30044 214 aa23.69■■□□□ 1.38
RELA-201ENST00000308639 MECOMQ03112 1051 aa23.69■■□□□ 1.38
RELA-201ENST00000308639 IL17AQ16552 155 aa23.69■■□□□ 1.38
RELA-201ENST00000308639 IGSF22Q8N9C0 903 aa23.69■■□□□ 1.38
RELA-201ENST00000308639 COL16A1Q07092 1604 aaPredicted RBP23.69■■□□□ 1.38
RELA-201ENST00000308639 ERCC5P28715 1186 aaPredicted RBP23.69■■□□□ 1.38
RELA-201ENST00000308639 ZSWIM4Q9H7M6 989 aa23.69■■□□□ 1.38
RELA-201ENST00000308639 MAPK8IP1Q9UQF2 711 aa23.69■■□□□ 1.38
RELA-201ENST00000308639 SPATA1Q5VX52 437 aa23.68■■□□□ 1.38
RELA-201ENST00000308639 KIFC2Q96AC6 838 aa23.68■■□□□ 1.38
RELA-201ENST00000308639 MTRQ99707 1265 aa23.68■■□□□ 1.38
RELA-201ENST00000308639 AKR1B15C9JRZ8 316 aaPredicted RBP23.68■■□□□ 1.38
RELA-201ENST00000308639 TUBB4AP04350 444 aa23.68■■□□□ 1.38
RELA-201ENST00000308639 NSUN4Q96CB9 384 aaKnown RBP23.68■■□□□ 1.38
RELA-201ENST00000308639 BRIP1Q9BX63 1249 aa23.68■■□□□ 1.38
RELA-201ENST00000308639 MTMR7Q9Y216 660 aa23.68■■□□□ 1.38
RELA-201ENST00000308639 UBE4AQ14139 1066 aa23.67■■□□□ 1.38
RELA-201ENST00000308639 TEX35Q5T0J7 233 aa23.67■■□□□ 1.38
RELA-201ENST00000308639 PNMA6AP0CW24 399 aaPredicted RBP23.67■■□□□ 1.38
RELA-201ENST00000308639 TERF2Q15554 542 aa23.67■■□□□ 1.38
RELA-201ENST00000308639 RASGRP4Q8TDF6 673 aa23.67■■□□□ 1.38
RELA-201ENST00000308639 ZBTB9Q96C00 473 aa23.67■■□□□ 1.38
RELA-201ENST00000308639 ADD3Q9UEY8 706 aaKnown RBP23.67■■□□□ 1.38
RELA-201ENST00000308639 NLRP5P59047 1200 aa23.67■■□□□ 1.38
RELA-201ENST00000308639 GPKOWQ92917 476 aaPredicted RBP eCLIP23.67■■□□□ 1.38
RELA-201ENST00000308639 DCP1AQ9NPI6 582 aaPredicted RBP23.67■■□□□ 1.38
RELA-201ENST00000308639 BSDC1Q9NW68 430 aaPredicted RBP23.67■■□□□ 1.38
RELA-201ENST00000308639 TFRCP02786 760 aaKnown RBP23.66■■□□□ 1.38
RELA-201ENST00000308639 CASP14P31944 242 aa23.66■■□□□ 1.38
RELA-201ENST00000308639 GABPB1Q06547 395 aaPredicted RBP23.66■■□□□ 1.38
RELA-201ENST00000308639 TXNRD3Q86VQ6 643 aa23.66■■□□□ 1.38
RELA-201ENST00000308639 LINC00116Q8NCU8 138 aa23.66■■□□□ 1.38
RELA-201ENST00000308639 SPATA31A1Q5TZJ5 1347 aa23.66■■□□□ 1.38
RELA-201ENST00000308639 ABL1P00519 1130 aa23.66■■□□□ 1.38
RELA-201ENST00000308639 CTCFLQ8NI51 663 aaPredicted RBP23.66■■□□□ 1.38
RELA-201ENST00000308639 CCDC12Q8WUD4 166 aaPredicted RBP23.66■■□□□ 1.38
RELA-201ENST00000308639 RBM28Q9NW13 759 aaKnown RBP23.66■■□□□ 1.38
RELA-201ENST00000308639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.66■■□□□ 1.38
RELA-201ENST00000308639 FXR1P51114 621 aaKnown RBP eCLIP23.65■■□□□ 1.38
RELA-201ENST00000308639 MAP3K9P80192 1104 aa23.65■■□□□ 1.38
RELA-201ENST00000308639 PPP2R3AQ06190 1150 aa23.65■■□□□ 1.38
RELA-201ENST00000308639 CDKAL1Q5VV42 579 aa23.65■■□□□ 1.38
RELA-201ENST00000308639 TBC1D9BQ66K14 1250 aa23.65■■□□□ 1.38
RELA-201ENST00000308639 BRMS1Q9HCU9 246 aa23.65■■□□□ 1.38
RELA-201ENST00000308639 MRFAP1Q9Y605 127 aa23.65■■□□□ 1.38
RELA-201ENST00000308639 RNF225M0QZC1 329 aaPredicted RBP23.65■■□□□ 1.38
RELA-201ENST00000308639 PLA2G4AP47712 749 aa23.65■■□□□ 1.38
RELA-201ENST00000308639 ATP2C1P98194 919 aaPredicted RBP23.65■■□□□ 1.38
RELA-201ENST00000308639 FERMT2Q96AC1 680 aa23.65■■□□□ 1.38
RELA-201ENST00000308639 EFCAB8A8MWE9 144 aa23.64■■□□□ 1.38
RELA-201ENST00000308639 BMS1Q14692 1282 aaKnown RBP23.64■■□□□ 1.38
RELA-201ENST00000308639 PPP2R5BQ15173 497 aa23.64■■□□□ 1.38
RELA-201ENST00000308639 RRAGBQ5VZM2 374 aa23.64■■□□□ 1.38
RELA-201ENST00000308639 PTF1AQ7RTS3 328 aa23.64■■□□□ 1.38
RELA-201ENST00000308639 PPFIBP1Q86W92 1011 aa23.64■■□□□ 1.38
RELA-201ENST00000308639 VPS16Q9H269 839 aa23.64■■□□□ 1.38
RELA-201ENST00000308639 FAM205AQ6ZU69 1335 aa23.64■■□□□ 1.37
RELA-201ENST00000308639 USP17L8P0C7I0 530 aa23.64■■□□□ 1.37
RELA-201ENST00000308639 E2F4Q16254 413 aa23.64■■□□□ 1.37
RELA-201ENST00000308639 ZNF652Q9Y2D9 606 aa23.64■■□□□ 1.37
RELA-201ENST00000308639 FGRP09769 529 aa23.63■■□□□ 1.37
RELA-201ENST00000308639 SCG2P13521 617 aa23.63■■□□□ 1.37
RELA-201ENST00000308639 PBX1P40424 430 aa23.63■■□□□ 1.37
RELA-201ENST00000308639 A0A1B0GUL6 1792 aa23.63■■□□□ 1.37
RELA-201ENST00000308639 TSPY2A6NKD2 308 aa23.63■■□□□ 1.37
RELA-201ENST00000308639 NUTM2BA6NNL0 878 aaPredicted RBP23.63■■□□□ 1.37
RELA-201ENST00000308639 NUTM2EB1AL46 878 aaPredicted RBP23.63■■□□□ 1.37
RELA-201ENST00000308639 ZRANB2O95218 330 aaKnown RBP eCLIP23.63■■□□□ 1.37
RELA-201ENST00000308639 GYPCP04921 128 aa23.63■■□□□ 1.37
RELA-201ENST00000308639 SF3B3Q15393 1217 aaKnown RBP23.63■■□□□ 1.37
RELA-201ENST00000308639 TMCO3Q6UWJ1 677 aa23.63■■□□□ 1.37
RELA-201ENST00000308639 GSDMAQ96QA5 445 aa23.63■■□□□ 1.37
RELA-201ENST00000308639 SRP68Q9UHB9 627 aaKnown RBP23.63■■□□□ 1.37
RELA-201ENST00000308639 ADGRG1Q9Y653 693 aa23.63■■□□□ 1.37
RELA-201ENST00000308639 DDAH1O94760 285 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 STAG2Q8N3U4 1231 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 ACRBPQ8NEB7 543 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 IPO4Q8TEX9 1081 aaKnown RBP23.62■■□□□ 1.37
RELA-201ENST00000308639 TAB2Q9NYJ8 693 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 GDAQ9Y2T3 454 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 LAMB2P55268 1798 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 WNK3Q9BYP7 1800 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 PP2D1A8MPX8 630 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 CCDC175P0C221 793 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms