RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 PRPF4BQ13523 1007 aaKnown RBP12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 ZNF827Q17R98 1081 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 PCDHA5Q9Y5H7 936 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 MMP1P03956 469 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 USP17L8P0C7I0 530 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 TAF3Q5VWG9 929 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 TRIML1Q8N9V2 468 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 NELFBQ8WX92 580 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 TAB2Q9NYJ8 693 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 REREQ9P2R6 1566 aa12.81□□□□□ -0.36
PCDHGC3-201ENST00000308177 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 ARHGAP6O43182 974 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 WDHD1O75717 1129 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 DESP17661 470 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 NR5A1Q13285 461 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 CLEC17AQ6ZS10 378 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 NIM1KQ8IY84 436 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 CEP112Q8N8E3 955 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 MRFAP1L1Q96HT8 127 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 PKD2L1Q9P0L9 805 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 POLR3GO15318 223 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 CHMP2AO43633 222 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 HLTFQ14527 1009 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 HERC4Q5GLZ8 1057 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 TBC1D9BQ66K14 1250 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 NEK8Q86SG6 692 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 SPDYE4A6NLX3 237 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 CERKLQ49MI3 558 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 NCAPH2Q6IBW4 605 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 UIMC1Q96RL1 719 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 ARFGAP3Q9NP61 516 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 CPDO75976 1380 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 H0YHG0 523 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 CFBP00751 764 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 BAG6P46379 1132 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 RFX5P48382 616 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 SPECC1LQ69YQ0 1117 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 TDRD7Q8NHU6 1098 aaKnown RBP12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 STAG1Q8WVM7 1258 aa12.8□□□□□ -0.36
PCDHGC3-201ENST00000308177 KRT9P35527 623 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 TRAPPC10P48553 1259 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 MB21D2Q8IYB1 491 aaPredicted RBP12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 SYMPKQ92797 1274 aaKnown RBP12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 ALDH8A1Q9H2A2 487 aaPredicted RBP12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 CSRNP2Q9H175 543 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 PSTPIP2Q9H939 334 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 CSF1RP07333 972 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 PRDX5P30044 214 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 TIGD1Q96MW7 591 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 MYOM1P52179 1685 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 CETN3O15182 167 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 TECP42680 631 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 DCAF17Q5H9S7 520 aaPredicted RBP12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 CCDC122Q5T0U0 273 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 GOLGA1Q92805 767 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 GJB4Q9NTQ9 266 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 DNM3Q9UQ16 869 aa12.79□□□□□ -0.36
PCDHGC3-201ENST00000308177 LRMPQ12912 555 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 ALX1Q15699 326 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 CPXCR1Q8N123 301 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 ARHGEF1Q92888 912 aaKnown RBP12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 DYNLL2Q96FJ2 89 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 CCDC17Q96LX7 622 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 TSPYL1Q9H0U9 437 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 IL25Q9H293 177 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 INCENPQ9NQS7 918 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 ADGRB2O60241 1585 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 WDR19Q8NEZ3 1342 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 PRPF3O43395 683 aaKnown RBP12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 ZNF500O60304 480 aaPredicted RBP12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 ICA1Q05084 483 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 ZNF34Q8IZ26 560 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 PICK1Q9NRD5 415 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 NEDD4P46934 1319 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 NF2P35240 595 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 LONP1P36776 959 aaKnown RBP12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 CYP26C1Q6V0L0 522 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 SERPINB13Q9UIV8 391 aa12.78□□□□□ -0.36
PCDHGC3-201ENST00000308177 MACROD2A1Z1Q3 448 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 ERICH4A6NGS2 130 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 GTPBP6O43824 516 aaPredicted RBP12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 CHGBP05060 677 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 SP4Q02446 784 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 DPCR1Q3MIW9 517 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 STOX1Q6ZVD7 989 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 KAZALD1Q96I82 304 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 GPR101Q96P66 508 aaPredicted RBP12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 NT5C3AQ9H0P0 336 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 SLIT1O75093 1534 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 B4DLN1 442 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms