RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ERFP50548 548 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 TMED1Q13445 227 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 CABP7Q86V35 215 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 CALML3P27482 149 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 IL15P40933 162 aaPredicted RBP13.97□□□□□ -0.17
USP38-201ENST00000307017 PRPF38AQ8NAV1 312 aaKnown RBP13.97□□□□□ -0.17
USP38-201ENST00000307017 KIAA1524Q8TCG1 905 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 SDR42E1Q8WUS8 393 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 CHMP6Q96FZ7 201 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 NCOA1Q15788 1441 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 RGS16O15492 202 aaPredicted RBP13.97□□□□□ -0.17
USP38-201ENST00000307017 KRIT1O00522 736 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 ADCY8P40145 1251 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 TSNAXIP1Q2TAA8 658 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 SFMBT2Q5VUG0 894 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 LBHD1Q9BQE6 289 aaPredicted RBP13.97□□□□□ -0.17
USP38-201ENST00000307017 SLC39A2Q9NP94 309 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.97□□□□□ -0.17
USP38-201ENST00000307017 ARHGEF35A5YM69 484 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 RPS6KA1Q15418 735 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 TMEM259Q4ZIN3 620 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 RSAD2Q8WXG1 361 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 VAMP4O75379 141 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 ZAP70P43403 619 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 IFT88Q13099 833 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 CNNM4Q6P4Q7 775 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 PIP4K2CQ8TBX8 421 aa13.97□□□□□ -0.17
USP38-201ENST00000307017 TSR3Q9UJK0 312 aaKnown RBP13.97□□□□□ -0.17
USP38-201ENST00000307017 EXOC3O60645 756 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 APOL6Q9BWW8 343 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 HDAC9Q9UKV0 1011 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 ACTN4O43707 911 aaKnown RBP13.96□□□□□ -0.17
USP38-201ENST00000307017 DLATP10515 647 aaKnown RBP13.96□□□□□ -0.17
USP38-201ENST00000307017 ATP5DP30049 168 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 CCDC38Q502W7 563 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 FTOQ9C0B1 505 aaKnown RBP eCLIP13.96□□□□□ -0.17
USP38-201ENST00000307017 ZC3H12CQ9C0D7 883 aaKnown RBP13.96□□□□□ -0.17
USP38-201ENST00000307017 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.17
USP38-201ENST00000307017 hCG_2014768A0A024R1R8 64 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 DYNLT1P63172 113 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 IGBP1P78318 339 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 SNAPC4Q5SXM2 1469 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 HDLBPQ00341 1268 aaKnown RBP13.96□□□□□ -0.17
USP38-201ENST00000307017 PTH1RQ03431 593 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 ZBTB41Q5SVQ8 909 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 TAOK1Q7L7X3 1001 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 RPAINQ86UA6 219 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 MMS19Q96T76 1030 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 MPHOSPH6Q99547 160 aaKnown RBP13.96□□□□□ -0.17
USP38-201ENST00000307017 LGR6Q9HBX8 967 aa13.96□□□□□ -0.17
USP38-201ENST00000307017 KRT81Q14533 505 aa13.96□□□□□ -0.18
USP38-201ENST00000307017 SLC9C1Q4G0N8 1177 aa13.96□□□□□ -0.18
USP38-201ENST00000307017 BRAPQ7Z569 592 aa13.96□□□□□ -0.18
USP38-201ENST00000307017 ZNF215Q9UL58 517 aaPredicted RBP13.96□□□□□ -0.18
USP38-201ENST00000307017 GNPATO15228 680 aa13.96□□□□□ -0.18
USP38-201ENST00000307017 IRX4P78413 519 aa13.96□□□□□ -0.18
USP38-201ENST00000307017 RASSF7Q02833 373 aa13.96□□□□□ -0.18
USP38-201ENST00000307017 ZBTB40Q9NUA8 1239 aa13.96□□□□□ -0.18
USP38-201ENST00000307017 A1BGP04217 495 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 TNNI3KQ59H18 835 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 FPGT-TNNI3KV9GXZ4 949 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 NOP56O00567 594 aaKnown RBP13.95□□□□□ -0.18
USP38-201ENST00000307017 PRPF6O94906 941 aaKnown RBP13.95□□□□□ -0.18
USP38-201ENST00000307017 RFX8Q6ZV50 586 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 DHX29Q7Z478 1369 aaKnown RBP13.95□□□□□ -0.18
USP38-201ENST00000307017 POLR2FP61218 127 aaKnown RBP13.95□□□□□ -0.18
USP38-201ENST00000307017 RPS6KA2Q15349 733 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 HABP4Q5JVS0 413 aaKnown RBP13.95□□□□□ -0.18
USP38-201ENST00000307017 LRRC47Q8N1G4 583 aaKnown RBP13.95□□□□□ -0.18
USP38-201ENST00000307017 CFAP61Q8NHU2 1237 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 BCAS4Q8TDM0 211 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 CAVIN2O95810 425 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 GNA11P29992 359 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 TROQ12816 1431 aaPredicted RBP13.95□□□□□ -0.18
USP38-201ENST00000307017 HIPK4Q8NE63 616 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 SUCLG2Q96I99 432 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 CAPS2Q9BXY5 557 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 MAD1L1Q9Y6D9 718 aa13.95□□□□□ -0.18
USP38-201ENST00000307017 KCNJ18B7U540 433 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 GIPC1O14908 333 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 KCNJ12Q14500 433 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 LIN9Q5TKA1 542 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 TTC41PQ6P2S7 1318 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 NKX1-1Q15270 411 aaPredicted RBP13.94□□□□□ -0.18
USP38-201ENST00000307017 STAG1Q8WVM7 1258 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 ANKRD20A3Q5VUR7 823 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 ARFGAP2Q8N6H7 521 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 TCP11Q8WWU5 503 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 DCTPP1Q9H773 170 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 MORC3Q14149 939 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 TTF2Q9UNY4 1162 aaKnown RBP13.94□□□□□ -0.18
USP38-201ENST00000307017 ZNF532Q9HCE3 1301 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 KDRP35968 1356 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 SNAP25P60880 206 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 PALD1Q9ULE6 856 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 BMP15O95972 392 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 GSTA1P08263 222 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 GSTA2P09210 222 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 NDUFA8P51970 172 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms